RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 SHISA4Q96DD7 197 aa12.92□□□□□ -0.34
RPAP1-212ENST00000569829 RBM27Q9P2N5 1060 aaKnown RBP12.92□□□□□ -0.34
RPAP1-212ENST00000569829 MYO1BO43795 1136 aa12.91□□□□□ -0.34
RPAP1-212ENST00000569829 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
RPAP1-212ENST00000569829 MMP14P50281 582 aa12.91□□□□□ -0.34
RPAP1-212ENST00000569829 CACNB3P54284 484 aa12.91□□□□□ -0.34
RPAP1-212ENST00000569829 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
RPAP1-212ENST00000569829 CHMP3Q9Y3E7 222 aa12.91□□□□□ -0.34
RPAP1-212ENST00000569829 ANKRD18BA2A2Z9 1011 aa12.9□□□□□ -0.34
RPAP1-212ENST00000569829 GYG1P46976 350 aa12.9□□□□□ -0.34
RPAP1-212ENST00000569829 FOXO4P98177 505 aa12.9□□□□□ -0.34
RPAP1-212ENST00000569829 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
RPAP1-212ENST00000569829 ZFYVE28Q9HCC9 887 aa12.9□□□□□ -0.34
RPAP1-212ENST00000569829 TTF2Q9UNY4 1162 aaKnown RBP12.9□□□□□ -0.34
RPAP1-212ENST00000569829 VAMP4O75379 141 aa12.89□□□□□ -0.35
RPAP1-212ENST00000569829 MAP3K9P80192 1104 aa12.89□□□□□ -0.35
RPAP1-212ENST00000569829 C15orf52Q6ZUT6 534 aaKnown RBP12.89□□□□□ -0.35
RPAP1-212ENST00000569829 ZNF804AQ7Z570 1209 aa12.89□□□□□ -0.35
RPAP1-212ENST00000569829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPAP1-212ENST00000569829 ZKSCAN4Q969J2 545 aaPredicted RBP12.89□□□□□ -0.35
RPAP1-212ENST00000569829 IQSEC3Q9UPP2 1182 aaPredicted RBP12.89□□□□□ -0.35
RPAP1-212ENST00000569829 UNCXA6NJT0 531 aa12.88□□□□□ -0.35
RPAP1-212ENST00000569829 BTBD19C9JJ37 291 aa12.88□□□□□ -0.35
RPAP1-212ENST00000569829 F6X3S4 739 aa12.88□□□□□ -0.35
RPAP1-212ENST00000569829 FLIIQ13045 1269 aa12.88□□□□□ -0.35
RPAP1-212ENST00000569829 MFSD14BQ5SR56 506 aa12.88□□□□□ -0.35
RPAP1-212ENST00000569829 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
RPAP1-212ENST00000569829 DZIP1LQ8IYY4 767 aaKnown RBP12.88□□□□□ -0.35
RPAP1-212ENST00000569829 DPF3Q92784 378 aa12.88□□□□□ -0.35
RPAP1-212ENST00000569829 STK31Q9BXU1 1019 aa12.88□□□□□ -0.35
RPAP1-212ENST00000569829 CPA4Q9UI42 421 aa12.88□□□□□ -0.35
RPAP1-212ENST00000569829 SNCAIPQ9Y6H5 919 aa12.88□□□□□ -0.35
RPAP1-212ENST00000569829 IRF6O14896 467 aa12.87□□□□□ -0.35
RPAP1-212ENST00000569829 CRKP46108 304 aa12.87□□□□□ -0.35
RPAP1-212ENST00000569829 GTF2A2P52657 109 aa12.87□□□□□ -0.35
RPAP1-212ENST00000569829 FKBP1AP62942 108 aaKnown RBP12.87□□□□□ -0.35
RPAP1-212ENST00000569829 LACTBP83111 547 aaPredicted RBP12.87□□□□□ -0.35
RPAP1-212ENST00000569829 IFIT5Q13325 482 aaKnown RBP12.87□□□□□ -0.35
RPAP1-212ENST00000569829 FKBP5Q13451 457 aaPredicted RBP12.87□□□□□ -0.35
RPAP1-212ENST00000569829 LMBR1LQ6UX01 489 aa12.87□□□□□ -0.35
RPAP1-212ENST00000569829 DNAAF4Q8WXU2 420 aa12.87□□□□□ -0.35
RPAP1-212ENST00000569829 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
RPAP1-212ENST00000569829 SOX1O00570 391 aaPredicted RBP12.86□□□□□ -0.35
RPAP1-212ENST00000569829 TLR2O60603 784 aa12.86□□□□□ -0.35
RPAP1-212ENST00000569829 FAM9BQ8IZU0 186 aa12.86□□□□□ -0.35
RPAP1-212ENST00000569829 TDRD7Q8NHU6 1098 aaKnown RBP12.86□□□□□ -0.35
RPAP1-212ENST00000569829 FAM84BQ96KN1 310 aaPredicted RBP12.86□□□□□ -0.35
RPAP1-212ENST00000569829 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
RPAP1-212ENST00000569829 FAM205AQ6ZU69 1335 aa12.86□□□□□ -0.35
RPAP1-212ENST00000569829 FANCIQ9NVI1 1328 aa12.86□□□□□ -0.35
RPAP1-212ENST00000569829 ARAP2Q8WZ64 1704 aa12.85□□□□□ -0.35
RPAP1-212ENST00000569829 SPDYE5A6NIY4 337 aa12.85□□□□□ -0.35
RPAP1-212ENST00000569829 DLL1O00548 723 aa12.85□□□□□ -0.35
RPAP1-212ENST00000569829 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
RPAP1-212ENST00000569829 TRIM47Q96LD4 638 aa12.85□□□□□ -0.35
RPAP1-212ENST00000569829 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
RPAP1-212ENST00000569829 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
RPAP1-212ENST00000569829 CSADQ9Y600 493 aa12.85□□□□□ -0.35
RPAP1-212ENST00000569829 ZNF521Q96K83 1311 aa12.85□□□□□ -0.35
RPAP1-212ENST00000569829 EXOSC9Q06265 439 aaKnown RBP12.84□□□□□ -0.35
RPAP1-212ENST00000569829 CHAF1AQ13111 956 aaPredicted RBP12.84□□□□□ -0.35
RPAP1-212ENST00000569829 TNFAIP1Q13829 316 aa12.84□□□□□ -0.35
RPAP1-212ENST00000569829 C17orf99Q6UX52 265 aa12.84□□□□□ -0.35
RPAP1-212ENST00000569829 LDHAL6AQ6ZMR3 332 aa12.84□□□□□ -0.35
RPAP1-212ENST00000569829 MIGA2Q7L4E1 593 aa12.84□□□□□ -0.35
RPAP1-212ENST00000569829 LRCH3Q96II8 777 aa12.84□□□□□ -0.35
RPAP1-212ENST00000569829 WRNIP1Q96S55 665 aa12.84□□□□□ -0.35
RPAP1-212ENST00000569829 PRO3102Q9H379 93 aa12.84□□□□□ -0.35
RPAP1-212ENST00000569829 MYH16Q9H6N6 1097 aa12.84□□□□□ -0.35
RPAP1-212ENST00000569829 CNNM1Q9NRU3 951 aa12.84□□□□□ -0.35
RPAP1-212ENST00000569829 UNC80Q8N2C7 3258 aa12.84□□□□□ -0.35
RPAP1-212ENST00000569829 OSBPP22059 807 aa12.83□□□□□ -0.36
RPAP1-212ENST00000569829 HIBADHP31937 336 aaKnown RBP12.83□□□□□ -0.36
RPAP1-212ENST00000569829 INPP5BP32019 993 aa12.83□□□□□ -0.36
RPAP1-212ENST00000569829 PSMC4P43686 418 aa12.83□□□□□ -0.36
RPAP1-212ENST00000569829 BEND3Q5T5X7 828 aa12.83□□□□□ -0.36
RPAP1-212ENST00000569829 UBE2Q1Q7Z7E8 422 aa12.83□□□□□ -0.36
RPAP1-212ENST00000569829 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.83□□□□□ -0.36
RPAP1-212ENST00000569829 SLC17A8Q8NDX2 589 aa12.83□□□□□ -0.36
RPAP1-212ENST00000569829 CETPP11597 493 aa12.82□□□□□ -0.36
RPAP1-212ENST00000569829 CCL5P13501 91 aa12.82□□□□□ -0.36
RPAP1-212ENST00000569829 ARHGEF6Q15052 776 aa12.82□□□□□ -0.36
RPAP1-212ENST00000569829 TAF7LQ5H9L4 462 aa12.82□□□□□ -0.36
RPAP1-212ENST00000569829 ERO1BQ86YB8 467 aa12.82□□□□□ -0.36
RPAP1-212ENST00000569829 SRRDQ9UH36 339 aa12.82□□□□□ -0.36
RPAP1-212ENST00000569829 GABRQQ9UN88 632 aa12.82□□□□□ -0.36
RPAP1-212ENST00000569829 RIPOR2Q9Y4F9 1068 aa12.82□□□□□ -0.36
RPAP1-212ENST00000569829 CUL9Q8IWT3 2517 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 FMNL1O95466 1100 aaPredicted RBP12.81□□□□□ -0.36
RPAP1-212ENST00000569829 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 TNNI2P48788 182 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 PRKCZQ05513 592 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 SNAPC2Q13487 334 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 MOGSQ13724 837 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 KIF22Q14807 665 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 RNF208Q9H0X6 261 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 ADGRA2Q96PE1 1338 aa12.81□□□□□ -0.36
RPAP1-212ENST00000569829 VCANP13611 3396 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms