RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 CCDC8Q9H0W5 538 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 IL1RAPL2Q9NP60 686 aa11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 GNL3LQ9NVN8 582 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 PGAP2Q9UHJ9 254 aa11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 FZD1Q9UP38 647 aa11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 FAM205AQ6ZU69 1335 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 TRPM7Q96QT4 1865 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 ECM2O94769 699 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 CRKP46108 304 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 RRP1P56182 461 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 CYP4F22Q6NT55 531 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 PI16Q6UXB8 463 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 MOB2Q70IA6 237 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 CDCA5Q96FF9 252 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 TDRD3Q9H7E2 651 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 SNRKQ9NRH2 765 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 ABCF2Q9UG63 623 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 AKAP2Q9Y2D5 859 aa11.13□□□□□ -0.63
GTF3C1-210ENST00000569394 COL1A1P02452 1464 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 TCP10L2B9ZVM9 353 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 VEGFBP49765 207 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 CACNB3P54284 484 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 DIXDC1Q155Q3 683 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 DEFB115Q30KQ5 88 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 TNNI3KQ59H18 835 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 TTC39AQ5SRH9 613 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 TBC1D9Q6ZT07 1266 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 PLCD3Q8N3E9 789 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 CRBNQ96SW2 442 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 DBNDD2Q9BQY9 259 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 TLR7Q9NYK1 1049 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 FPGT-TNNI3KV9GXZ4 949 aa11.12□□□□□ -0.63
GTF3C1-210ENST00000569394 MYO1BO43795 1136 aa11.11□□□□□ -0.63
GTF3C1-210ENST00000569394 PRDX5P30044 214 aa11.11□□□□□ -0.63
GTF3C1-210ENST00000569394 IRX6P78412 446 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-210ENST00000569394 RASGRF1Q13972 1273 aa11.11□□□□□ -0.63
GTF3C1-210ENST00000569394 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
GTF3C1-210ENST00000569394 SIRT2Q8IXJ6 389 aa11.11□□□□□ -0.63
GTF3C1-210ENST00000569394 NDUFB9Q9Y6M9 179 aa11.11□□□□□ -0.63
GTF3C1-210ENST00000569394 ZNF609O15014 1411 aa11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 SMARCA5O60264 1052 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 AOC2O75106 756 aa11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 HUNKP57058 714 aa11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 MKRN3Q13064 507 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 AACSQ86V21 672 aa11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 C2orf69Q8N8R5 385 aa11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 WDR66Q8TBY9 1149 aa11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 TBC1D22AQ8WUA7 517 aa11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 TEKT1Q969V4 418 aa11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 EAF2Q96CJ1 260 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 GBA2Q9HCG7 927 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 DENND2AQ9ULE3 1009 aa11.1□□□□□ -0.63
GTF3C1-210ENST00000569394 ARAP2Q8WZ64 1704 aa11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 CNTNAP1P78357 1384 aa11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 UBE2Q2LH0YL09 131 aa11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 HMMRO75330 724 aa11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 LDHBP07195 334 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 FKBP1AP62942 108 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 CCDC158Q5M9N0 1113 aa11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 RPAP2Q8IXW5 612 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 ZBED3Q96IU2 234 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 CAPNS2Q96L46 248 aa11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 ZNF70Q9UC06 446 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 SUPT16HQ9Y5B9 1047 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 TLL2Q9Y6L7 1015 aa11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 WDR33Q9C0J8 1336 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-210ENST00000569394 MCAMP43121 646 aa11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 TCP10Q12799 353 aa11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 NBPF12Q5TAG4 269 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 SAPCD2Q86UD0 394 aa11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 DZIP1Q86YF9 867 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 APOBEC3FQ8IUX4 373 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 CDAN1Q8IWY9 1227 aa11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 SPATA5Q8NB90 893 aa11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 RHPN1Q8TCX5 695 aa11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 DEFB129Q9H1M3 183 aa11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 CHMP4BQ9H444 224 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 RAI14Q9P0K7 980 aa11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 DBNLQ9UJU6 430 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 NOP58Q9Y2X3 529 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-210ENST00000569394 RASSF10A6NK89 507 aa11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 ZNF157P51786 506 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 RASA3Q14644 834 aa11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 ERICH6Q7L0X2 663 aa11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 MTMR14Q8NCE2 650 aa11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 ZIC5Q96T25 663 aa11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 TMEM39BQ9GZU3 492 aa11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 LRP2BPQ9P2M1 347 aa11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 SERPINA10Q9UK55 444 aa11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 ANGEL1Q9UNK9 670 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 ECM29Q5VYK3 1845 aa11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 PITPNM2Q9BZ72 1349 aa11.07□□□□□ -0.64
GTF3C1-210ENST00000569394 AK9Q5TCS8 1911 aa11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 MYH2Q9UKX2 1941 aa11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 HSPA1AP0DMV8 641 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 HSPA1BP0DMV9 641 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 NF2P35240 595 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms