RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 PTH1RQ03431 593 aa24.58■■□□□ 1.53
SPSB3-211ENST00000569380 RUFY2Q8WXA3 655 aa24.58■■□□□ 1.53
SPSB3-211ENST00000569380 APPBP2Q92624 585 aa24.58■■□□□ 1.53
SPSB3-211ENST00000569380 MAST2Q6P0Q8 1798 aa24.58■■□□□ 1.52
SPSB3-211ENST00000569380 F8W031 263 aaPredicted RBP24.57■■□□□ 1.52
SPSB3-211ENST00000569380 ZFYP08048 801 aaPredicted RBP24.57■■□□□ 1.52
SPSB3-211ENST00000569380 UBE3CQ15386 1083 aa24.57■■□□□ 1.52
SPSB3-211ENST00000569380 DIXDC1Q155Q3 683 aa24.57■■□□□ 1.52
SPSB3-211ENST00000569380 MCMDC2Q4G0Z9 681 aa24.57■■□□□ 1.52
SPSB3-211ENST00000569380 MIGA1Q8NAN2 632 aa24.57■■□□□ 1.52
SPSB3-211ENST00000569380 RAD17O75943 681 aa24.57■■□□□ 1.52
SPSB3-211ENST00000569380 LDHBP07195 334 aaKnown RBP24.57■■□□□ 1.52
SPSB3-211ENST00000569380 ZSCAN25Q6NSZ9 544 aa24.57■■□□□ 1.52
SPSB3-211ENST00000569380 LSG1Q9H089 658 aaKnown RBP24.57■■□□□ 1.52
SPSB3-211ENST00000569380 GPBP1L1Q9HC44 474 aaPredicted RBP24.57■■□□□ 1.52
SPSB3-211ENST00000569380 HELLSQ9NRZ9 838 aa24.57■■□□□ 1.52
SPSB3-211ENST00000569380 ADAMTSL1Q8N6G6 1762 aa24.56■■□□□ 1.52
SPSB3-211ENST00000569380 DACT2Q5SW24 774 aa24.56■■□□□ 1.52
SPSB3-211ENST00000569380 VPS53Q5VIR6 699 aa24.56■■□□□ 1.52
SPSB3-211ENST00000569380 NAA16Q6N069 864 aaPredicted RBP24.56■■□□□ 1.52
SPSB3-211ENST00000569380 NIM1KQ8IY84 436 aa24.56■■□□□ 1.52
SPSB3-211ENST00000569380 LTBP3Q9NS15 1303 aa24.56■■□□□ 1.52
SPSB3-211ENST00000569380 DZIP1Q86YF9 867 aaKnown RBP24.55■■□□□ 1.52
SPSB3-211ENST00000569380 USP26Q9BXU7 913 aa24.55■■□□□ 1.52
SPSB3-211ENST00000569380 RNF181Q9P0P0 153 aa24.55■■□□□ 1.52
SPSB3-211ENST00000569380 PSME4Q14997 1843 aa24.55■■□□□ 1.52
SPSB3-211ENST00000569380 USP17L3A6NCW0 530 aa24.54■■□□□ 1.52
SPSB3-211ENST00000569380 USP17L4A6NCW7 530 aa24.54■■□□□ 1.52
SPSB3-211ENST00000569380 USP17L1Q7RTZ2 530 aa24.54■■□□□ 1.52
SPSB3-211ENST00000569380 ZGPATQ8N5A5 531 aaKnown RBP24.54■■□□□ 1.52
SPSB3-211ENST00000569380 RAD50Q92878 1312 aa24.54■■□□□ 1.52
SPSB3-211ENST00000569380 CCDC171Q6TFL3 1326 aa24.54■■□□□ 1.52
SPSB3-211ENST00000569380 LRRFIP1Q32MZ4 808 aaKnown RBP24.54■■□□□ 1.52
SPSB3-211ENST00000569380 MYH2Q9UKX2 1941 aa24.54■■□□□ 1.52
SPSB3-211ENST00000569380 GPAA1O43292 621 aa24.53■■□□□ 1.52
SPSB3-211ENST00000569380 MBD4O95243 580 aa24.53■■□□□ 1.52
SPSB3-211ENST00000569380 DYNLL1P63167 89 aaKnown RBP24.53■■□□□ 1.52
SPSB3-211ENST00000569380 STRIP1Q5VSL9 837 aa24.53■■□□□ 1.52
SPSB3-211ENST00000569380 SPTY2D1Q68D10 685 aaPredicted RBP24.53■■□□□ 1.52
SPSB3-211ENST00000569380 TBC1D22AQ8WUA7 517 aa24.53■■□□□ 1.52
SPSB3-211ENST00000569380 VPS33BQ9H267 617 aa24.53■■□□□ 1.52
SPSB3-211ENST00000569380 ARMT1Q9H993 441 aa24.53■■□□□ 1.52
SPSB3-211ENST00000569380 ZNRF3Q9ULT6 936 aa24.53■■□□□ 1.52
SPSB3-211ENST00000569380 SBF1O95248 1867 aa24.53■■□□□ 1.52
SPSB3-211ENST00000569380 PSMD14O00487 310 aa24.52■■□□□ 1.52
SPSB3-211ENST00000569380 REC8O95072 547 aa24.52■■□□□ 1.52
SPSB3-211ENST00000569380 LCORLQ8N3X6 602 aa24.52■■□□□ 1.52
SPSB3-211ENST00000569380 FOXP2O15409 715 aa24.52■■□□□ 1.52
SPSB3-211ENST00000569380 SCNN1DP51172 638 aa24.52■■□□□ 1.52
SPSB3-211ENST00000569380 KIAA0825Q8IV33 1275 aa24.52■■□□□ 1.52
SPSB3-211ENST00000569380 TICAM2Q86XR7 235 aa24.51■■□□□ 1.51
SPSB3-211ENST00000569380 C22orf23Q9BZE7 217 aa24.51■■□□□ 1.51
SPSB3-211ENST00000569380 ZBTB12Q9Y330 459 aaPredicted RBP24.51■■□□□ 1.51
SPSB3-211ENST00000569380 CXCL9Q07325 125 aa24.5■■□□□ 1.51
SPSB3-211ENST00000569380 KIAA1211Q6ZU35 1233 aa24.5■■□□□ 1.51
SPSB3-211ENST00000569380 TTF2Q9UNY4 1162 aaKnown RBP24.5■■□□□ 1.51
SPSB3-211ENST00000569380 PRKAB2O43741 272 aa24.49■■□□□ 1.51
SPSB3-211ENST00000569380 JDP2Q8WYK2 163 aa24.49■■□□□ 1.51
SPSB3-211ENST00000569380 TBC1D32Q96NH3 1257 aa24.49■■□□□ 1.51
SPSB3-211ENST00000569380 AATFQ9NY61 560 aaKnown RBP eCLIP24.49■■□□□ 1.51
SPSB3-211ENST00000569380 PCDHAC2Q9Y5I4 1007 aa24.49■■□□□ 1.51
SPSB3-211ENST00000569380 C1QTNF8P60827 252 aa24.49■■□□□ 1.51
SPSB3-211ENST00000569380 AIDAQ96BJ3 306 aa24.49■■□□□ 1.51
SPSB3-211ENST00000569380 STRBPQ96SI9 672 aaKnown RBP24.49■■□□□ 1.51
SPSB3-211ENST00000569380 LMNB1P20700 586 aa24.48■■□□□ 1.51
SPSB3-211ENST00000569380 RIOK1Q9BRS2 568 aaKnown RBP24.48■■□□□ 1.51
SPSB3-211ENST00000569380 UPF2Q9HAU5 1272 aaKnown RBP24.48■■□□□ 1.51
SPSB3-211ENST00000569380 PALD1Q9ULE6 856 aa24.48■■□□□ 1.51
SPSB3-211ENST00000569380 MAGEB6P1A0A0J9YX57 407 aa24.47■■□□□ 1.51
SPSB3-211ENST00000569380 HSPD1P10809 573 aaKnown RBP24.47■■□□□ 1.51
SPSB3-211ENST00000569380 RBM19Q9Y4C8 960 aaKnown RBP24.47■■□□□ 1.51
SPSB3-211ENST00000569380 VIL1P09327 827 aaKnown RBP24.47■■□□□ 1.51
SPSB3-211ENST00000569380 RSBN1LQ6PCB5 846 aaPredicted RBP24.47■■□□□ 1.51
SPSB3-211ENST00000569380 MAP4K1Q92918 833 aa24.47■■□□□ 1.51
SPSB3-211ENST00000569380 RBM8AQ9Y5S9 174 aaKnown RBP24.47■■□□□ 1.51
SPSB3-211ENST00000569380 DICER1Q9UPY3 1922 aaKnown RBP24.46■■□□□ 1.51
SPSB3-211ENST00000569380 MROH7-TTC4A0A0A0MT08 1334 aa24.46■■□□□ 1.51
SPSB3-211ENST00000569380 ZNF541Q9H0D2 1346 aa24.46■■□□□ 1.51
SPSB3-211ENST00000569380 DAGLAQ9Y4D2 1042 aa24.46■■□□□ 1.51
SPSB3-211ENST00000569380 FKBP1AP62942 108 aaKnown RBP24.45■■□□□ 1.5
SPSB3-211ENST00000569380 NMRK2Q9NPI5 230 aa24.45■■□□□ 1.5
SPSB3-211ENST00000569380 TAF6LQ9Y6J9 622 aa24.45■■□□□ 1.5
SPSB3-211ENST00000569380 SHTN1A0MZ66 631 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 KIF3CO14782 793 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 CIAPIN1Q6FI81 312 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 SDR42E1Q8WUS8 393 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 GMLQ99445 158 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 TIAM2Q8IVF5 1701 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 FZD9O00144 591 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 BTDP43251 543 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 GSTO1P78417 241 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 SH3RF3Q8TEJ3 882 aaPredicted RBP24.44■■□□□ 1.5
SPSB3-211ENST00000569380 EPB41L4AQ9HCS5 686 aaPredicted RBP24.44■■□□□ 1.5
SPSB3-211ENST00000569380 SUGT1Q9Y2Z0 365 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 SLC4A4Q9Y6R1 1079 aa24.44■■□□□ 1.5
SPSB3-211ENST00000569380 GAKO14976 1311 aa24.43■■□□□ 1.5
SPSB3-211ENST00000569380 RBM25P49756 843 aaKnown RBP24.43■■□□□ 1.5
SPSB3-211ENST00000569380 RASEFQ8IZ41 740 aa24.42■■□□□ 1.5
SPSB3-211ENST00000569380 KIF2CQ99661 725 aa24.42■■□□□ 1.5
SPSB3-211ENST00000569380 DSCC1Q9BVC3 393 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms