RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 PDE3AQ14432 1141 aa19.34■□□□□ 0.69
SCAMP2-210ENST00000569124 BEND3Q5T5X7 828 aa19.34■□□□□ 0.69
SCAMP2-210ENST00000569124 NBPF12Q5TAG4 269 aaPredicted RBP19.34■□□□□ 0.69
SCAMP2-210ENST00000569124 LMBR1LQ6UX01 489 aa19.34■□□□□ 0.69
SCAMP2-210ENST00000569124 LDHAL6AQ6ZMR3 332 aa19.34■□□□□ 0.69
SCAMP2-210ENST00000569124 OTOP1Q7RTM1 612 aa19.34■□□□□ 0.69
SCAMP2-210ENST00000569124 ANKRD13AQ8IZ07 590 aa19.34■□□□□ 0.69
SCAMP2-210ENST00000569124 ERO1AQ96HE7 468 aa19.34■□□□□ 0.69
SCAMP2-210ENST00000569124 PRMT6Q96LA8 375 aaPredicted RBP19.34■□□□□ 0.69
SCAMP2-210ENST00000569124 ZSWIM8A7E2V4 1837 aa19.34■□□□□ 0.69
SCAMP2-210ENST00000569124 CENPFP49454 3210 aa19.33■□□□□ 0.69
SCAMP2-210ENST00000569124 GRM8O00222 908 aa19.33■□□□□ 0.68
SCAMP2-210ENST00000569124 NEFLP07196 543 aa19.33■□□□□ 0.68
SCAMP2-210ENST00000569124 ZNF594Q96JF6 807 aaPredicted RBP19.33■□□□□ 0.68
SCAMP2-210ENST00000569124 FAM205AQ6ZU69 1335 aa19.32■□□□□ 0.68
SCAMP2-210ENST00000569124 RASA3Q14644 834 aa19.32■□□□□ 0.68
SCAMP2-210ENST00000569124 AOX1Q06278 1338 aa19.31■□□□□ 0.68
SCAMP2-210ENST00000569124 CRHR2Q13324 411 aa19.31■□□□□ 0.68
SCAMP2-210ENST00000569124 MFSD14BQ5SR56 506 aa19.31■□□□□ 0.68
SCAMP2-210ENST00000569124 INTS3Q68E01 1043 aaKnown RBP19.31■□□□□ 0.68
SCAMP2-210ENST00000569124 SRCIN1Q9C0H9 1055 aa19.31■□□□□ 0.68
SCAMP2-210ENST00000569124 C9orf78Q9NZ63 289 aaPredicted RBP19.31■□□□□ 0.68
SCAMP2-210ENST00000569124 TTF2Q9UNY4 1162 aaKnown RBP19.31■□□□□ 0.68
SCAMP2-210ENST00000569124 USP2O75604 605 aaPredicted RBP19.3■□□□□ 0.68
SCAMP2-210ENST00000569124 SPDYE2Q495Y8 402 aa19.3■□□□□ 0.68
SCAMP2-210ENST00000569124 EPHA10Q5JZY3 1008 aa19.3■□□□□ 0.68
SCAMP2-210ENST00000569124 ITPRIPQ8IWB1 547 aa19.3■□□□□ 0.68
SCAMP2-210ENST00000569124 CD99L2Q8TCZ2 262 aa19.3■□□□□ 0.68
SCAMP2-210ENST00000569124 PANK1Q8TE04 598 aa19.3■□□□□ 0.68
SCAMP2-210ENST00000569124 SERPINA10Q9UK55 444 aa19.3■□□□□ 0.68
SCAMP2-210ENST00000569124 TNNQ9UQP3 1299 aa19.3■□□□□ 0.68
SCAMP2-210ENST00000569124 ALDH1L1O75891 902 aa19.29■□□□□ 0.68
SCAMP2-210ENST00000569124 GJA5P36382 358 aa19.29■□□□□ 0.68
SCAMP2-210ENST00000569124 UBE4AQ14139 1066 aa19.29■□□□□ 0.68
SCAMP2-210ENST00000569124 TMEM57Q8N5G2 664 aa19.29■□□□□ 0.68
SCAMP2-210ENST00000569124 GCC1Q96CN9 775 aa19.29■□□□□ 0.68
SCAMP2-210ENST00000569124 OPTNQ96CV9 577 aa19.29■□□□□ 0.68
SCAMP2-210ENST00000569124 CHMP4BQ9H444 224 aaKnown RBP19.29■□□□□ 0.68
SCAMP2-210ENST00000569124 ELP3Q9H9T3 547 aa19.29■□□□□ 0.68
SCAMP2-210ENST00000569124 ZNF70Q9UC06 446 aaPredicted RBP19.29■□□□□ 0.68
SCAMP2-210ENST00000569124 MGAMO43451 1857 aa19.28■□□□□ 0.68
SCAMP2-210ENST00000569124 GYG1P46976 350 aa19.28■□□□□ 0.68
SCAMP2-210ENST00000569124 TDRD7Q8NHU6 1098 aaKnown RBP19.28■□□□□ 0.68
SCAMP2-210ENST00000569124 TDRD3Q9H7E2 651 aaKnown RBP19.28■□□□□ 0.68
SCAMP2-210ENST00000569124 PTPN22Q9Y2R2 807 aa19.28■□□□□ 0.68
SCAMP2-210ENST00000569124 RLBP1P12271 317 aa19.27■□□□□ 0.68
SCAMP2-210ENST00000569124 HIBADHP31937 336 aaKnown RBP19.27■□□□□ 0.68
SCAMP2-210ENST00000569124 TNNI2P48788 182 aa19.27■□□□□ 0.68
SCAMP2-210ENST00000569124 SP3Q02447 781 aa19.27■□□□□ 0.68
SCAMP2-210ENST00000569124 MVPQ14764 893 aaKnown RBP19.27■□□□□ 0.68
SCAMP2-210ENST00000569124 C20orf194Q5TEA3 1177 aa19.27■□□□□ 0.68
SCAMP2-210ENST00000569124 EFCC1Q9HA90 598 aa19.27■□□□□ 0.68
SCAMP2-210ENST00000569124 DDX19BQ9UMR2 479 aa19.27■□□□□ 0.68
SCAMP2-210ENST00000569124 COG6Q9Y2V7 657 aa19.27■□□□□ 0.68
SCAMP2-210ENST00000569124 DOCK2Q92608 1830 aa19.27■□□□□ 0.68
SCAMP2-210ENST00000569124 MKI67P46013 3256 aaKnown RBP19.27■□□□□ 0.67
SCAMP2-210ENST00000569124 TESPA1A2RU30 521 aaPredicted RBP19.26■□□□□ 0.67
SCAMP2-210ENST00000569124 POTEFA5A3E0 1075 aa19.26■□□□□ 0.67
SCAMP2-210ENST00000569124 TCP10L2B9ZVM9 353 aa19.25■□□□□ 0.67
SCAMP2-210ENST00000569124 CRKP46108 304 aa19.25■□□□□ 0.67
SCAMP2-210ENST00000569124 VPS37DQ86XT2 251 aa19.25■□□□□ 0.67
SCAMP2-210ENST00000569124 PTPN18Q99952 460 aa19.25■□□□□ 0.67
SCAMP2-210ENST00000569124 CSADQ9Y600 493 aa19.25■□□□□ 0.67
SCAMP2-210ENST00000569124 MYH2Q9UKX2 1941 aa19.25■□□□□ 0.67
SCAMP2-210ENST00000569124 CEP290O15078 2479 aa19.25■□□□□ 0.67
SCAMP2-210ENST00000569124 MROH5Q6ZUA9 1318 aa19.25■□□□□ 0.67
SCAMP2-210ENST00000569124 BRCA2P51587 3418 aa19.24■□□□□ 0.67
SCAMP2-210ENST00000569124 TAF1CQ15572 869 aaPredicted RBP19.24■□□□□ 0.67
SCAMP2-210ENST00000569124 ARMC5Q96C12 935 aa19.24■□□□□ 0.67
SCAMP2-210ENST00000569124 SUCLG2Q96I99 432 aa19.24■□□□□ 0.67
SCAMP2-210ENST00000569124 FAM84BQ96KN1 310 aaPredicted RBP19.24■□□□□ 0.67
SCAMP2-210ENST00000569124 TEPSINQ96N21 525 aa19.24■□□□□ 0.67
SCAMP2-210ENST00000569124 TMEM39BQ9GZU3 492 aa19.24■□□□□ 0.67
SCAMP2-210ENST00000569124 CCL15-CCL14A0A0B4J2E2 113 aa19.23■□□□□ 0.67
SCAMP2-210ENST00000569124 GTF2A2P52657 109 aa19.23■□□□□ 0.67
SCAMP2-210ENST00000569124 IRX6P78412 446 aaPredicted RBP19.23■□□□□ 0.67
SCAMP2-210ENST00000569124 VGLL4Q14135 290 aa19.23■□□□□ 0.67
SCAMP2-210ENST00000569124 ARHGEF6Q15052 776 aa19.23■□□□□ 0.67
SCAMP2-210ENST00000569124 CCL15Q16663 113 aa19.23■□□□□ 0.67
SCAMP2-210ENST00000569124 CDAN1Q8IWY9 1227 aa19.23■□□□□ 0.67
SCAMP2-210ENST00000569124 PUS3Q9BZE2 481 aaKnown RBP19.23■□□□□ 0.67
SCAMP2-210ENST00000569124 HDAC5Q9UQL6 1122 aa19.23■□□□□ 0.67
SCAMP2-210ENST00000569124 PTPRFP10586 1907 aa19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 FRAT2O75474 233 aaPredicted RBP19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 GNAI3P08754 354 aa19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 CHAF1AQ13111 956 aaPredicted RBP19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 TBC1D22AQ8WUA7 517 aa19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 OTUD5Q96G74 571 aa19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 MS4A4AQ96JQ5 239 aa19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 CRBNQ96SW2 442 aa19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 ZFYVE28Q9HCC9 887 aa19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 IQSEC3Q9UPP2 1182 aaPredicted RBP19.22■□□□□ 0.67
SCAMP2-210ENST00000569124 WDHD1O75717 1129 aaPredicted RBP19.21■□□□□ 0.67
SCAMP2-210ENST00000569124 MAP3K9P80192 1104 aa19.21■□□□□ 0.67
SCAMP2-210ENST00000569124 CAVIN4Q5BKX8 364 aa19.21■□□□□ 0.67
SCAMP2-210ENST00000569124 CNKSR2Q8WXI2 1034 aa19.21■□□□□ 0.67
SCAMP2-210ENST00000569124 BRI3BPQ8WY22 251 aa19.21■□□□□ 0.67
SCAMP2-210ENST00000569124 TEKT1Q969V4 418 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms