RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 BEGAINQ9BUH8 593 aa31.38■■■□□ 2.61
CCNF-205ENST00000569093 C1orf115Q9H7X2 142 aa31.38■■■□□ 2.61
CCNF-205ENST00000569093 ZBTB7BO15156 539 aaPredicted RBP31.37■■■□□ 2.61
CCNF-205ENST00000569093 PHKA1P46020 1223 aa31.37■■■□□ 2.61
CCNF-205ENST00000569093 ZNF70Q9UC06 446 aaPredicted RBP31.37■■■□□ 2.61
CCNF-205ENST00000569093 FZD1Q9UP38 647 aa31.37■■■□□ 2.61
CCNF-205ENST00000569093 COL1A1P02452 1464 aaPredicted RBP31.37■■■□□ 2.61
CCNF-205ENST00000569093 KIF23Q02241 960 aaPredicted RBP31.36■■■□□ 2.61
CCNF-205ENST00000569093 PANK1Q8TE04 598 aa31.36■■■□□ 2.61
CCNF-205ENST00000569093 SLC10A3P09131 477 aa31.35■■■□□ 2.61
CCNF-205ENST00000569093 SPDYE2Q495Y8 402 aa31.35■■■□□ 2.61
CCNF-205ENST00000569093 TSKSQ9UJT2 592 aa31.35■■■□□ 2.61
CCNF-205ENST00000569093 RASAL3Q86YV0 1011 aa31.34■■■□□ 2.61
CCNF-205ENST00000569093 WDR66Q8TBY9 1149 aa31.34■■■□□ 2.61
CCNF-205ENST00000569093 PRDM10Q9NQV6 1147 aa31.34■■■□□ 2.61
CCNF-205ENST00000569093 GNL3LQ9NVN8 582 aaKnown RBP31.34■■■□□ 2.61
CCNF-205ENST00000569093 A0A1B0GUL7 405 aa31.33■■■□□ 2.61
CCNF-205ENST00000569093 HDLBPQ00341 1268 aaKnown RBP31.33■■■□□ 2.61
CCNF-205ENST00000569093 RASA3Q14644 834 aa31.33■■■□□ 2.61
CCNF-205ENST00000569093 CCDC102BQ68D86 513 aa31.33■■■□□ 2.61
CCNF-205ENST00000569093 TNS4Q8IZW8 715 aa31.33■■■□□ 2.61
CCNF-205ENST00000569093 ATP8B2P98198 1209 aa31.32■■■□□ 2.6
CCNF-205ENST00000569093 G3BP1Q13283 466 aaKnown RBP eCLIP31.32■■■□□ 2.6
CCNF-205ENST00000569093 NBPF12Q5TAG4 269 aaPredicted RBP31.32■■■□□ 2.6
CCNF-205ENST00000569093 TEKT1Q969V4 418 aa31.32■■■□□ 2.6
CCNF-205ENST00000569093 SUGT1Q9Y2Z0 365 aa31.32■■■□□ 2.6
CCNF-205ENST00000569093 PPP2R3BQ9Y5P8 575 aa31.32■■■□□ 2.6
CCNF-205ENST00000569093 POLA2Q14181 598 aa31.31■■■□□ 2.6
CCNF-205ENST00000569093 ANGEL1Q9UNK9 670 aaKnown RBP31.31■■■□□ 2.6
CCNF-205ENST00000569093 AKAP2Q9Y2D5 859 aa31.31■■■□□ 2.6
CCNF-205ENST00000569093 SSC5DA1L4H1 1573 aa31.3■■■□□ 2.6
CCNF-205ENST00000569093 ARMC9Q7Z3E5 817 aa31.3■■■□□ 2.6
CCNF-205ENST00000569093 XAGE2Q96GT9 111 aa31.3■■■□□ 2.6
CCNF-205ENST00000569093 NEUROD6Q96NK8 337 aa31.3■■■□□ 2.6
CCNF-205ENST00000569093 MRIQ9BWK5 157 aa31.3■■■□□ 2.6
CCNF-205ENST00000569093 TCP10L2B9ZVM9 353 aa31.29■■■□□ 2.6
CCNF-205ENST00000569093 SSH3Q8TE77 659 aa31.29■■■□□ 2.6
CCNF-205ENST00000569093 DENND2AQ9ULE3 1009 aa31.29■■■□□ 2.6
CCNF-205ENST00000569093 CACNB3P54284 484 aa31.28■■■□□ 2.6
CCNF-205ENST00000569093 ZDHHC15Q96MV8 337 aa31.28■■■□□ 2.6
CCNF-205ENST00000569093 MAST3O60307 1309 aa31.27■■■□□ 2.6
CCNF-205ENST00000569093 SEMA3EO15041 775 aa31.27■■■□□ 2.6
CCNF-205ENST00000569093 PRDX5P30044 214 aa31.27■■■□□ 2.6
CCNF-205ENST00000569093 SUPT20HL1Q3ZLR7 823 aa31.27■■■□□ 2.6
CCNF-205ENST00000569093 LDLRAD1Q5T700 205 aa31.27■■■□□ 2.6
CCNF-205ENST00000569093 APOBEC3HQ6NTF7 200 aaKnown RBP31.27■■■□□ 2.6
CCNF-205ENST00000569093 CSRNP1Q96S65 589 aa31.27■■■□□ 2.6
CCNF-205ENST00000569093 RCAN3Q9UKA8 241 aa31.27■■■□□ 2.6
CCNF-205ENST00000569093 TNFAIP1Q13829 316 aa31.26■■■□□ 2.59
CCNF-205ENST00000569093 HHIPL2Q6UWX4 724 aa31.26■■■□□ 2.59
CCNF-205ENST00000569093 CDAN1Q8IWY9 1227 aa31.26■■■□□ 2.59
CCNF-205ENST00000569093 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.26■■■□□ 2.59
CCNF-205ENST00000569093 RASGRF1Q13972 1273 aa31.25■■■□□ 2.59
CCNF-205ENST00000569093 DIXDC1Q155Q3 683 aa31.25■■■□□ 2.59
CCNF-205ENST00000569093 CA12O43570 354 aa31.24■■■□□ 2.59
CCNF-205ENST00000569093 PPP1R12BO60237 982 aaPredicted RBP31.24■■■□□ 2.59
CCNF-205ENST00000569093 SURF6O75683 361 aaKnown RBP31.24■■■□□ 2.59
CCNF-205ENST00000569093 LDHBP07195 334 aaKnown RBP31.24■■■□□ 2.59
CCNF-205ENST00000569093 MKRN3Q13064 507 aaKnown RBP31.24■■■□□ 2.59
CCNF-205ENST00000569093 MVPQ14764 893 aaKnown RBP31.24■■■□□ 2.59
CCNF-205ENST00000569093 TEPSINQ96N21 525 aa31.24■■■□□ 2.59
CCNF-205ENST00000569093 TMEM39BQ9GZU3 492 aa31.24■■■□□ 2.59
CCNF-205ENST00000569093 SALL1Q9NSC2 1324 aa31.24■■■□□ 2.59
CCNF-205ENST00000569093 MAP3K11Q16584 847 aa31.23■■■□□ 2.59
CCNF-205ENST00000569093 ZBTB22O15209 634 aa31.22■■■□□ 2.59
CCNF-205ENST00000569093 USP2O75604 605 aaPredicted RBP31.22■■■□□ 2.59
CCNF-205ENST00000569093 MS4A1P11836 297 aa31.22■■■□□ 2.59
CCNF-205ENST00000569093 TNNI2P48788 182 aa31.22■■■□□ 2.59
CCNF-205ENST00000569093 OS9Q13438 667 aaPredicted RBP31.22■■■□□ 2.59
CCNF-205ENST00000569093 GORABQ5T7V8 394 aa31.21■■■□□ 2.59
CCNF-205ENST00000569093 CEP85Q6P2H3 762 aa31.21■■■□□ 2.59
CCNF-205ENST00000569093 CLMNQ96JQ2 1002 aa31.21■■■□□ 2.59
CCNF-205ENST00000569093 RNF186Q9NXI6 227 aa31.21■■■□□ 2.59
CCNF-205ENST00000569093 DAGLAQ9Y4D2 1042 aa31.21■■■□□ 2.59
CCNF-205ENST00000569093 AKAP11Q9UKA4 1901 aa31.2■■■□□ 2.59
CCNF-205ENST00000569093 COG6Q9Y2V7 657 aa31.2■■■□□ 2.59
CCNF-205ENST00000569093 TRPA1O75762 1119 aa31.19■■■□□ 2.58
CCNF-205ENST00000569093 SLC10A4Q96EP9 437 aa31.19■■■□□ 2.58
CCNF-205ENST00000569093 TMOD2Q9NZR1 351 aa31.19■■■□□ 2.58
CCNF-205ENST00000569093 ABCF2Q9UG63 623 aa31.19■■■□□ 2.58
CCNF-205ENST00000569093 NOP58Q9Y2X3 529 aaKnown RBP31.19■■■□□ 2.58
CCNF-205ENST00000569093 HMG20BQ9P0W2 317 aa31.18■■■□□ 2.58
CCNF-205ENST00000569093 CASP8AP2Q9UKL3 1982 aa31.17■■■□□ 2.58
CCNF-205ENST00000569093 IREB2P48200 963 aaKnown RBP31.17■■■□□ 2.58
CCNF-205ENST00000569093 TNNI3KQ59H18 835 aa31.17■■■□□ 2.58
CCNF-205ENST00000569093 CDC42EP5Q6NZY7 148 aa31.17■■■□□ 2.58
CCNF-205ENST00000569093 PI16Q6UXB8 463 aa31.17■■■□□ 2.58
CCNF-205ENST00000569093 FPGT-TNNI3KV9GXZ4 949 aa31.17■■■□□ 2.58
CCNF-205ENST00000569093 PDS5AQ29RF7 1337 aaKnown RBP31.17■■■□□ 2.58
CCNF-205ENST00000569093 SPRYD7Q5W111 196 aa31.16■■■□□ 2.58
CCNF-205ENST00000569093 REM2Q8IYK8 340 aaPredicted RBP31.16■■■□□ 2.58
CCNF-205ENST00000569093 ZGPATQ8N5A5 531 aaKnown RBP31.16■■■□□ 2.58
CCNF-205ENST00000569093 GPR108Q9NPR9 543 aa31.16■■■□□ 2.58
CCNF-205ENST00000569093 FKBP1CQ5VVH2 108 aa31.15■■■□□ 2.58
CCNF-205ENST00000569093 FAM83AQ86UY5 434 aa31.15■■■□□ 2.58
CCNF-205ENST00000569093 MYH2Q9UKX2 1941 aa31.15■■■□□ 2.58
CCNF-205ENST00000569093 CAPN15O75808 1086 aa31.14■■■□□ 2.58
CCNF-205ENST00000569093 SPATA5Q8NB90 893 aa31.14■■■□□ 2.58
CCNF-205ENST00000569093 DBNDD2Q9BQY9 259 aa31.14■■■□□ 2.58
CCNF-205ENST00000569093 SAGE1Q9NXZ1 904 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms