RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 MYO5CQ9NQX4 1742 aa9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 SETD1BQ9UPS6 1966 aaKnown RBP9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 SPAG9O60271 1321 aaKnown RBP9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 REREQ9P2R6 1566 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 FGRP09769 529 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 DNAJA1P31689 397 aaKnown RBP9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 GPLD1P80108 840 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 MAP3K10Q02779 954 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 PAK2Q13177 524 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 RELL1Q8IUW5 271 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 TMEM102Q8N9M5 508 aaPredicted RBP9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 ABHD17AQ96GS6 310 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 SLC30A3Q99726 388 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 KCNQ5Q9NR82 932 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 HCN2Q9UL51 889 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 PTPRKQ15262 1439 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 FMN1Q68DA7 1419 aa9.54□□□□□ -0.88
HERPUD1-214ENST00000568651 TCOF1Q13428 1488 aaKnown RBP9.53□□□□□ -0.88
HERPUD1-214ENST00000568651 ITGA6P23229 1130 aa9.53□□□□□ -0.88
HERPUD1-214ENST00000568651 RBL2Q08999 1139 aa9.53□□□□□ -0.88
HERPUD1-214ENST00000568651 COL13A1Q5TAT6 717 aaPredicted RBP9.53□□□□□ -0.88
HERPUD1-214ENST00000568651 BHMTQ93088 406 aa9.53□□□□□ -0.88
HERPUD1-214ENST00000568651 SPACA7Q96KW9 195 aa9.53□□□□□ -0.88
HERPUD1-214ENST00000568651 TMEM74Q96NL1 305 aa9.53□□□□□ -0.88
HERPUD1-214ENST00000568651 COPRSQ9NQ92 184 aa9.53□□□□□ -0.88
HERPUD1-214ENST00000568651 PLA2R1Q13018 1463 aa9.53□□□□□ -0.88
HERPUD1-214ENST00000568651 ABCC1P33527 1531 aa9.52□□□□□ -0.88
HERPUD1-214ENST00000568651 ATF4P18848 351 aaPredicted RBP9.52□□□□□ -0.89
HERPUD1-214ENST00000568651 CD33P20138 364 aa9.52□□□□□ -0.89
HERPUD1-214ENST00000568651 FGFR3P22607 806 aa9.52□□□□□ -0.89
HERPUD1-214ENST00000568651 KIAA0825Q8IV33 1275 aa9.52□□□□□ -0.89
HERPUD1-214ENST00000568651 SEC16BQ96JE7 1060 aa9.52□□□□□ -0.89
HERPUD1-214ENST00000568651 TRIM47Q96LD4 638 aa9.52□□□□□ -0.89
HERPUD1-214ENST00000568651 SPON2Q9BUD6 331 aa9.52□□□□□ -0.89
HERPUD1-214ENST00000568651 HIRIP3Q9BW71 556 aaPredicted RBP9.52□□□□□ -0.89
HERPUD1-214ENST00000568651 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
HERPUD1-214ENST00000568651 ST8SIA5O15466 376 aa9.51□□□□□ -0.89
HERPUD1-214ENST00000568651 FOXR1Q6PIV2 292 aa9.51□□□□□ -0.89
HERPUD1-214ENST00000568651 MCF2L2Q86YR7 1114 aa9.51□□□□□ -0.89
HERPUD1-214ENST00000568651 AVENQ9NQS1 362 aaPredicted RBP9.51□□□□□ -0.89
HERPUD1-214ENST00000568651 AKAP2Q9Y2D5 859 aa9.51□□□□□ -0.89
HERPUD1-214ENST00000568651 CEP170BQ9Y4F5 1589 aaPredicted RBP9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 EEA1Q15075 1411 aa9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 SOBPA7XYQ1 873 aa9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 NFKBIEO00221 500 aa9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 GTF2F1P35269 517 aaKnown RBP eCLIP9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 COL9A2Q14055 689 aaPredicted RBP9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 GRIN2CQ14957 1233 aa9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 DPH6Q7L8W6 267 aa9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 NOP9Q86U38 636 aaKnown RBP9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 NXPE3Q969Y0 559 aa9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 RHOVQ96L33 236 aa9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 TRERF1Q96PN7 1200 aa9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 RGS17Q9UGC6 210 aaPredicted RBP9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 SHANK2Q9UPX8 1470 aa9.5□□□□□ -0.89
HERPUD1-214ENST00000568651 EIF4A3P38919 411 aaKnown RBP9.49□□□□□ -0.89
HERPUD1-214ENST00000568651 GRIA4P48058 902 aa9.49□□□□□ -0.89
HERPUD1-214ENST00000568651 RPS26P62854 115 aaKnown RBP9.49□□□□□ -0.89
HERPUD1-214ENST00000568651 DHX38Q92620 1227 aaKnown RBP9.49□□□□□ -0.89
HERPUD1-214ENST00000568651 GTPBP3Q969Y2 492 aaKnown RBP9.49□□□□□ -0.89
HERPUD1-214ENST00000568651 PBX4Q9BYU1 374 aa9.49□□□□□ -0.89
HERPUD1-214ENST00000568651 ADAMTS1Q9UHI8 967 aa9.49□□□□□ -0.89
HERPUD1-214ENST00000568651 MYO3AQ8NEV4 1616 aa9.49□□□□□ -0.89
HERPUD1-214ENST00000568651 KIDINS220Q9ULH0 1771 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 LOC102724428A0A0B4J2F2 783 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 PDE2AO00408 941 aaPredicted RBP9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 SIN3BO75182 1162 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 GBP2P32456 591 aaPredicted RBP9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 LIG3P49916 1009 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 SIK1P57059 783 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 ZNF468Q5VIY5 522 aaPredicted RBP9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 ANKLE2Q86XL3 938 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 PHC3Q8NDX5 983 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 NSUN5Q96P11 429 aaKnown RBP9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 DNAJC2Q99543 621 aaKnown RBP9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.48□□□□□ -0.898e-10■■■□□ 16.7
HERPUD1-214ENST00000568651 NT5C1AQ9BXI3 368 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 RBSNQ9H1K0 784 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 ZNF576Q9H609 170 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 STRIP2Q9ULQ0 834 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 SAMD9LQ8IVG5 1584 aa9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.48□□□□□ -0.89
HERPUD1-214ENST00000568651 A2MP01023 1474 aa9.47□□□□□ -0.89
HERPUD1-214ENST00000568651 SYCP2Q9BX26 1530 aa9.47□□□□□ -0.89
HERPUD1-214ENST00000568651 A0A096LPE4 126 aa9.47□□□□□ -0.89
HERPUD1-214ENST00000568651 A0A1W2PPZ6 126 aa9.47□□□□□ -0.89
HERPUD1-214ENST00000568651 FAM177A1Q8N128 213 aaPredicted RBP9.47□□□□□ -0.89
HERPUD1-214ENST00000568651 NECAB3Q96P71 396 aaPredicted RBP9.47□□□□□ -0.89
HERPUD1-214ENST00000568651 LNPKQ9C0E8 428 aa9.47□□□□□ -0.89
HERPUD1-214ENST00000568651 CLTCQ00610 1675 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-214ENST00000568651 TNRQ92752 1358 aa9.47□□□□□ -0.89
HERPUD1-214ENST00000568651 A2ML1A8K2U0 1454 aa9.47□□□□□ -0.89
HERPUD1-214ENST00000568651 CPS1P31327 1500 aa9.46□□□□□ -0.89
HERPUD1-214ENST00000568651 ITSN2Q9NZM3 1697 aa9.46□□□□□ -0.89
HERPUD1-214ENST00000568651 CDC42BPBQ9Y5S2 1711 aa9.46□□□□□ -0.89
HERPUD1-214ENST00000568651 STK10O94804 968 aaKnown RBP9.46□□□□□ -0.9
HERPUD1-214ENST00000568651 ACPPP15309 386 aa9.46□□□□□ -0.9
HERPUD1-214ENST00000568651 LMNB2Q03252 620 aa9.46□□□□□ -0.9
HERPUD1-214ENST00000568651 NBPF6Q5VWK0 638 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms