RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 TTLL5Q6EMB2 1281 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 G2E3Q7L622 706 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 PLA2G12BQ9BX93 195 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 COA1Q9GZY4 146 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 GBA2Q9HCG7 927 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 C9orf78Q9NZ63 289 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 HDAC9Q9UKV0 1011 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 MYO3BQ8WXR4 1341 aa5.9□□□□□ -1.47
HERPUD1-213ENST00000568358 FANCIQ9NVI1 1328 aa5.9□□□□□ -1.47
HERPUD1-213ENST00000568358 PSME4Q14997 1843 aa5.9□□□□□ -1.47
HERPUD1-213ENST00000568358 SCN9AQ15858 1988 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 AOC2O75106 756 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 HSPA8P11142 646 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 PDE4AP27815 886 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 ZNF280AP59817 542 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 TTLL12Q14166 644 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 CCDC57Q2TAC2 916 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 STRIP1Q5VSL9 837 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 RGMBQ6NW40 437 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 SLC4A10Q6U841 1118 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 MYOZ2Q9NPC6 264 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 GGA3Q9NZ52 723 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 BOLA1Q9Y3E2 137 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 ZNF804BA4D1E1 1349 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 RTL9Q8NET4 1388 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 MED23Q9ULK4 1368 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 DUOX1Q9NRD9 1551 aa5.89□□□□□ -1.47
HERPUD1-213ENST00000568358 ADM5C9JUS6 153 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 MYO1BO43795 1136 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 PLIN1O60240 522 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 CSF1RP07333 972 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 FKBP1BP68106 108 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 CHRNDQ07001 517 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 PDE4CQ08493 712 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 MAP2K5Q13163 448 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 ANGEL2Q5VTE6 544 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 ZNF804AQ7Z570 1209 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 OXER1Q8TDS5 423 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 SRCIN1Q9C0H9 1055 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 CNNM1Q9NRU3 951 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 PITPNM2Q9BZ72 1349 aa5.88□□□□□ -1.47
HERPUD1-213ENST00000568358 CCDC85CA6NKD9 419 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 F6X3S4 739 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 GRM8O00222 908 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 IRF6O14896 467 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 ALDH1L1O75891 902 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 EGFRP00533 1210 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 GTF2IP78347 998 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 KCNA1Q09470 495 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 DLGAP5Q15398 846 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 FAM161AQ3B820 660 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 BEND3Q5T5X7 828 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 LMBR1LQ6UX01 489 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 LDHAL6AQ6ZMR3 332 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 ARMC9Q7Z3E5 817 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 VPS37DQ86XT2 251 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 CDCA5Q96FF9 252 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 LARP6Q9BRS8 491 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 TSKSQ9UJT2 592 aa5.87□□□□□ -1.47
HERPUD1-213ENST00000568358 ZNF609O15014 1411 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 WNT10BO00744 389 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 FRAT2O75474 233 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 TAF5LO75529 589 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 RBM5P52756 815 aaKnown RBP eCLIP5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 CASP7P55210 303 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 FOXO4P98177 505 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 KIF23Q02241 960 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 NBPF9Q3BBW0 867 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 SH3D19Q5HYK7 790 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 DACT2Q5SW24 774 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 DLK2Q6UY11 383 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 APOBEC3FQ8IUX4 373 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 KIAA0825Q8IV33 1275 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 HELBQ8NG08 1087 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 POM121Q96HA1 1249 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 ABHD8Q96I13 439 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 PCMTD1Q96MG8 357 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 GMLQ99445 158 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 CD209Q9NNX6 404 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 SAGE1Q9NXZ1 904 aa5.86□□□□□ -1.47
HERPUD1-213ENST00000568358 COL4A1P02462 1669 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 ASTN2O75129 1339 aaPredicted RBP5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 WTIPA6NIX2 430 aaPredicted RBP5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 FAM155AB1AL88 458 aaPredicted RBP5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 PPP1R12BO60237 982 aaPredicted RBP5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 TRPA1O75762 1119 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 SLC10A3P09131 477 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 EMP3P54852 163 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 DGKZQ13574 1117 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 UBE4AQ14139 1066 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 SUPT20HL1Q3ZLR7 823 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 CAVIN4Q5BKX8 364 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 C15orf52Q6ZUT6 534 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 TXNRD3Q86VQ6 643 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 DDX27Q96GQ7 796 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 MXD3Q9BW11 206 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 HDAC5Q9UQL6 1122 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 AK9Q5TCS8 1911 aa5.85□□□□□ -1.47
HERPUD1-213ENST00000568358 PTPRCP08575 1304 aa5.84□□□□□ -1.47
HERPUD1-213ENST00000568358 MROH5Q6ZUA9 1318 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms