RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 TMEM87BQ96K49 555 aa8.88□□□□□ -0.99
ATXN3-250ENST00000568290 TIGD1Q96MW7 591 aa8.88□□□□□ -0.99
ATXN3-250ENST00000568290 DBNDD2Q9BQY9 259 aa8.88□□□□□ -0.99
ATXN3-250ENST00000568290 PLA2G12BQ9BX93 195 aa8.88□□□□□ -0.99
ATXN3-250ENST00000568290 CNNM2Q9H8M5 875 aa8.88□□□□□ -0.99
ATXN3-250ENST00000568290 CBX8Q9HC52 389 aa8.88□□□□□ -0.99
ATXN3-250ENST00000568290 KCND1Q9NSA2 647 aa8.88□□□□□ -0.99
ATXN3-250ENST00000568290 POLR3EQ9NVU0 708 aa8.88□□□□□ -0.99
ATXN3-250ENST00000568290 PARP4Q9UKK3 1724 aaKnown RBP8.88□□□□□ -0.99
ATXN3-250ENST00000568290 KDM6AO15550 1401 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-250ENST00000568290 LAMB4A4D0S4 1761 aa8.87□□□□□ -0.99
ATXN3-250ENST00000568290 CCDC196A0A1B0GTZ2 297 aa8.87□□□□□ -0.99
ATXN3-250ENST00000568290 E7EWF7 191 aa8.87□□□□□ -0.99
ATXN3-250ENST00000568290 GOLIM4O00461 696 aa8.87□□□□□ -0.99
ATXN3-250ENST00000568290 PCCAP05165 728 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-250ENST00000568290 CPA1P15085 419 aa8.87□□□□□ -0.99
ATXN3-250ENST00000568290 MLLT3P42568 568 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-250ENST00000568290 TUBB4BP68371 445 aa8.87□□□□□ -0.99
ATXN3-250ENST00000568290 IFIT5Q13325 482 aaKnown RBP8.87□□□□□ -0.99
ATXN3-250ENST00000568290 SAFBQ15424 915 aaKnown RBP eCLIP8.87□□□□□ -0.99
ATXN3-250ENST00000568290 TPD52L1Q16890 204 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-250ENST00000568290 CT47A1Q5JQC4 288 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-250ENST00000568290 KANK3Q6NY19 840 aa8.87□□□□□ -0.99
ATXN3-250ENST00000568290 ZNF589Q86UQ0 364 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-250ENST00000568290 CREBRFQ8IUR6 639 aa8.87□□□□□ -0.99
ATXN3-250ENST00000568290 ELOA2Q8IYF1 753 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-250ENST00000568290 NAP1L2Q9ULW6 460 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-250ENST00000568290 CEP131Q9UPN4 1083 aa8.87□□□□□ -0.99
ATXN3-250ENST00000568290 WDR17Q8IZU2 1322 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 CDHR2Q9BYE9 1310 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 ALS2Q96Q42 1657 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 A0A1B0GUL7 405 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 GOLGA6L9A6NEM1 432 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 IGSF3O75054 1194 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 HSPD1P10809 573 aaKnown RBP8.86□□□□□ -0.99
ATXN3-250ENST00000568290 IL2RBP14784 551 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 XBP1P17861 261 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 LIG1P18858 919 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 GNAT2P19087 354 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 RCAN1P53805 252 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 SCRN1Q12765 414 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 SLC39A6Q13433 755 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 TCIRG1Q13488 830 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 PTPN14Q15678 1187 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 CAMK4Q16566 473 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 WASHC4Q2M389 1173 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 OLFM4Q6UX06 510 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 DDX46Q7L014 1031 aaKnown RBP8.86□□□□□ -0.99
ATXN3-250ENST00000568290 CCDC186Q7Z3E2 898 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 NSUN7Q8NE18 718 aaKnown RBP8.86□□□□□ -0.99
ATXN3-250ENST00000568290 KIF18AQ8NI77 898 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 PYM1Q9BRP8 204 aaKnown RBP8.86□□□□□ -0.99
ATXN3-250ENST00000568290 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
ATXN3-250ENST00000568290 GTPBP4Q9BZE4 634 aaKnown RBP8.86□□□□□ -0.99
ATXN3-250ENST00000568290 TTC12Q9H892 705 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-250ENST00000568290 TLR7Q9NYK1 1049 aaKnown RBP8.86□□□□□ -0.99
ATXN3-250ENST00000568290 TFIP11Q9UBB9 837 aaKnown RBP8.86□□□□□ -0.99
ATXN3-250ENST00000568290 AXIN2Q9Y2T1 843 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 USP16Q9Y5T5 823 aa8.86□□□□□ -0.99
ATXN3-250ENST00000568290 PKD1L3Q7Z443 1732 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 ZMYM6O95789 1325 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 SPATA31A3Q5VYP0 1347 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 ADAMTSL3P82987 1691 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 ERICH2A1L162 156 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 IKBKBO14920 756 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 PPP6R2O75170 966 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 NR1I2O75469 434 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 BMP15O95972 392 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 PDIA3P30101 505 aaKnown RBP8.85□□□□□ -0.99
ATXN3-250ENST00000568290 CASP7P55210 303 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 FOXO4P98177 505 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 TOM1L2Q6ZVM7 507 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 LRP10Q7Z4F1 713 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 CKAP2LQ8IYA6 745 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 FSIP1Q8NA03 581 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 ZBTB38Q8NAP3 1195 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-250ENST00000568290 SPC24Q8NBT2 197 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 CARD10Q9BWT7 1032 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 NACAP1Q9BZK3 213 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 KRT23Q9C075 422 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 ZNF609O15014 1411 aa8.85□□□□□ -0.99
ATXN3-250ENST00000568290 MAP3K15Q6ZN16 1313 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 ANKRD18BA2A2Z9 1011 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 SPTLC2O15270 562 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 SLC3A2P08195 630 aaKnown RBP8.84□□□□□ -0.99
ATXN3-250ENST00000568290 TNNT1P13805 278 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 CMA1P23946 247 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 PIP4K2AP48426 406 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-250ENST00000568290 ST3GAL1Q11201 340 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 UBE3CQ15386 1083 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 TAF3Q5VWG9 929 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 LUZP1Q86V48 1076 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 FCHSD1Q86WN1 690 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 TRIM22Q8IYM9 498 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 FBXO18Q8NFZ0 1043 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 DDX11Q96FC9 970 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 ISCA1Q9BUE6 129 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 DNAJC25Q9H1X3 360 aa8.84□□□□□ -0.99
ATXN3-250ENST00000568290 RNF41Q9H4P4 317 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-250ENST00000568290 PRDM11Q9NQV5 511 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms