RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 HDGFL1Q5TGJ6 251 aa9.92□□□□□ -0.82
SMG1-214ENST00000568038 RIPOR1Q6ZS17 1223 aa9.92□□□□□ -0.82
SMG1-214ENST00000568038 CUEDC1Q9NWM3 386 aaPredicted RBP9.92□□□□□ -0.82
SMG1-214ENST00000568038 UBR2Q8IWV8 1755 aa9.91□□□□□ -0.82
SMG1-214ENST00000568038 A1BGP04217 495 aa9.91□□□□□ -0.82
SMG1-214ENST00000568038 HOXB7P09629 217 aa9.91□□□□□ -0.82
SMG1-214ENST00000568038 BAG6P46379 1132 aa9.91□□□□□ -0.82
SMG1-214ENST00000568038 TXNRD1Q16881 649 aa9.91□□□□□ -0.82
SMG1-214ENST00000568038 DEFB132Q7Z7B7 95 aa9.91□□□□□ -0.82
SMG1-214ENST00000568038 GAS2L1Q99501 681 aaPredicted RBP9.91□□□□□ -0.82
SMG1-214ENST00000568038 BCL2L13Q9BXK5 485 aa9.91□□□□□ -0.82
SMG1-214ENST00000568038 TEX13AQ9BXU3 409 aaPredicted RBP9.91□□□□□ -0.82
SMG1-214ENST00000568038 SOS1Q07889 1333 aaPredicted RBP9.9□□□□□ -0.82
SMG1-214ENST00000568038 TRAK2O60296 914 aa9.9□□□□□ -0.82
SMG1-214ENST00000568038 STARD3NLO95772 234 aa9.9□□□□□ -0.82
SMG1-214ENST00000568038 ANXA1P04083 346 aa9.9□□□□□ -0.82
SMG1-214ENST00000568038 CENPBP07199 599 aaPredicted RBP9.9□□□□□ -0.82
SMG1-214ENST00000568038 CT47B1P0C2W7 299 aaPredicted RBP9.9□□□□□ -0.82
SMG1-214ENST00000568038 CYP19A1P11511 503 aaPredicted RBP9.9□□□□□ -0.82
SMG1-214ENST00000568038 GPC1P35052 558 aa9.9□□□□□ -0.82
SMG1-214ENST00000568038 PIP4K2AP48426 406 aaPredicted RBP9.9□□□□□ -0.82
SMG1-214ENST00000568038 CLN3Q13286 438 aa9.9□□□□□ -0.82
SMG1-214ENST00000568038 EZH2Q15910 746 aaKnown RBP9.9□□□□□ -0.82
SMG1-214ENST00000568038 SLFNL1Q499Z3 407 aa9.9□□□□□ -0.82
SMG1-214ENST00000568038 CCDC30Q5VVM6 783 aa9.9□□□□□ -0.82
SMG1-214ENST00000568038 LINC00116Q8NCU8 138 aa9.9□□□□□ -0.82
SMG1-214ENST00000568038 LRRC4BQ9NT99 713 aa9.9□□□□□ -0.82
SMG1-214ENST00000568038 RCAN3Q9UKA8 241 aa9.9□□□□□ -0.82
SMG1-214ENST00000568038 TNS1Q9HBL0 1735 aaKnown RBP9.9□□□□□ -0.83
SMG1-214ENST00000568038 C5P01031 1676 aa9.9□□□□□ -0.83
SMG1-214ENST00000568038 CANXP27824 592 aaKnown RBP9.89□□□□□ -0.83
SMG1-214ENST00000568038 CRKLP46109 303 aaKnown RBP9.89□□□□□ -0.83
SMG1-214ENST00000568038 RARSP54136 660 aaKnown RBP9.89□□□□□ -0.83
SMG1-214ENST00000568038 CAMKK2Q96RR4 588 aa9.89□□□□□ -0.83
SMG1-214ENST00000568038 STK31Q9BXU1 1019 aa9.89□□□□□ -0.83
SMG1-214ENST00000568038 SMC4Q9NTJ3 1288 aa9.89□□□□□ -0.83
SMG1-214ENST00000568038 CHPF2Q9P2E5 772 aa9.89□□□□□ -0.83
SMG1-214ENST00000568038 LY75O60449 1722 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 BCAR3O75815 825 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 MYL6BP14649 208 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 PROSER3Q2NL68 480 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 RNF135Q8IUD6 432 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 SSH1Q8WYL5 1049 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 ZNF428Q96B54 188 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 CHMP4AQ9BY43 222 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 GRIP2Q9C0E4 1043 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 CCDC87Q9NVE4 849 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 DOLKQ9UPQ8 538 aa9.88□□□□□ -0.83
SMG1-214ENST00000568038 TJP1Q07157 1748 aa9.87□□□□□ -0.83
SMG1-214ENST00000568038 ALDH1L2Q3SY69 923 aa9.87□□□□□ -0.83
SMG1-214ENST00000568038 OXLD1Q5BKU9 147 aa9.87□□□□□ -0.83
SMG1-214ENST00000568038 NBPF10Q6P3W6 841 aaKnown RBP9.87□□□□□ -0.83
SMG1-214ENST00000568038 INTS5Q6P9B9 1019 aaKnown RBP9.87□□□□□ -0.83
SMG1-214ENST00000568038 NBPF15Q8N660 670 aa9.87□□□□□ -0.83
SMG1-214ENST00000568038 CNKSR1Q969H4 720 aa9.87□□□□□ -0.83
SMG1-214ENST00000568038 DDX21Q9NR30 783 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMG1-214ENST00000568038 DBF4Q9UBU7 674 aaPredicted RBP9.87□□□□□ -0.83
SMG1-214ENST00000568038 ZBTB1Q9Y2K1 713 aa9.87□□□□□ -0.83
SMG1-214ENST00000568038 GNRH1P01148 92 aa9.86□□□□□ -0.83
SMG1-214ENST00000568038 AIMP1Q12904 312 aaKnown RBP9.86□□□□□ -0.83
SMG1-214ENST00000568038 SMIM5Q71RC9 77 aa9.86□□□□□ -0.83
SMG1-214ENST00000568038 G2E3Q7L622 706 aa9.86□□□□□ -0.83
SMG1-214ENST00000568038 ARXQ96QS3 562 aa9.86□□□□□ -0.83
SMG1-214ENST00000568038 PHAXQ9H814 394 aaKnown RBP9.86□□□□□ -0.83
SMG1-214ENST00000568038 LAMB4A4D0S4 1761 aa9.86□□□□□ -0.83
SMG1-214ENST00000568038 CNTNAP4Q9C0A0 1308 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 GPR25O00155 361 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 IL2RAP01589 272 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 PHKA2P46019 1235 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 CENPCQ03188 943 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 MCM6Q14566 821 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 PHTF2Q8N3S3 785 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 XAGE3Q8WTP9 111 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 FRAT1Q92837 279 aaPredicted RBP9.85□□□□□ -0.83
SMG1-214ENST00000568038 ESYT1Q9BSJ8 1104 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 HYPKQ9NX55 129 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 NOB1Q9ULX3 412 aaKnown RBP9.85□□□□□ -0.83
SMG1-214ENST00000568038 ZNF831Q5JPB2 1677 aa9.85□□□□□ -0.83
SMG1-214ENST00000568038 RPS6KA4O75676 772 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 STAU1O95793 577 aaKnown RBP9.84□□□□□ -0.83
SMG1-214ENST00000568038 HMGB2P26583 209 aaKnown RBP9.84□□□□□ -0.83
SMG1-214ENST00000568038 FLIIQ13045 1269 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 USP4Q13107 963 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 SEMA3FQ13275 785 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 DBN1Q16643 649 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 WASHC4Q2M389 1173 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 COPS6Q7L5N1 327 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 TAS1R3Q7RTX0 852 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 NPM2Q86SE8 214 aaKnown RBP9.84□□□□□ -0.83
SMG1-214ENST00000568038 SVOPQ8N4V2 548 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 WHAMMQ8TF30 809 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 ZNF837Q96EG3 531 aaPredicted RBP9.84□□□□□ -0.83
SMG1-214ENST00000568038 TIMMDC1Q9NPL8 285 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 TFCP2L1Q9NZI6 479 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 RTCBQ9Y3I0 505 aaKnown RBP9.84□□□□□ -0.83
SMG1-214ENST00000568038 DYRK1BQ9Y463 629 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 SUPT16HQ9Y5B9 1047 aaKnown RBP9.84□□□□□ -0.83
SMG1-214ENST00000568038 MYH14Q7Z406 1995 aaKnown RBP9.84□□□□□ -0.83
SMG1-214ENST00000568038 TAF1LQ8IZX4 1826 aa9.84□□□□□ -0.83
SMG1-214ENST00000568038 CICQ96RK0 1608 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms