RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 CNKSR2Q8WXI2 1034 aa28.96■■■□□ 2.23
CNEP1R1-209ENST00000567712 FBXO33Q7Z6M2 555 aa28.95■■■□□ 2.22
CNEP1R1-209ENST00000567712 ANKRD13AQ8IZ07 590 aa28.95■■■□□ 2.22
CNEP1R1-209ENST00000567712 ELP3Q9H9T3 547 aa28.95■■■□□ 2.22
CNEP1R1-209ENST00000567712 KIAA0100Q14667 2235 aaKnown RBP28.95■■■□□ 2.22
CNEP1R1-209ENST00000567712 ZNF521Q96K83 1311 aa28.94■■■□□ 2.22
CNEP1R1-209ENST00000567712 TCP10L2B9ZVM9 353 aa28.94■■■□□ 2.22
CNEP1R1-209ENST00000567712 CRKP46108 304 aa28.94■■■□□ 2.22
CNEP1R1-209ENST00000567712 RABL6Q3YEC7 729 aaPredicted RBP28.94■■■□□ 2.22
CNEP1R1-209ENST00000567712 PRPF38BQ5VTL8 546 aaKnown RBP28.94■■■□□ 2.22
CNEP1R1-209ENST00000567712 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.94■■■□□ 2.22
CNEP1R1-209ENST00000567712 TMEM39BQ9GZU3 492 aa28.94■■■□□ 2.22
CNEP1R1-209ENST00000567712 BRCA2P51587 3418 aa28.94■■■□□ 2.22
CNEP1R1-209ENST00000567712 TESPA1A2RU30 521 aaPredicted RBP28.93■■■□□ 2.22
CNEP1R1-209ENST00000567712 MRPL50Q8N5N7 158 aaKnown RBP28.93■■■□□ 2.22
CNEP1R1-209ENST00000567712 KLHDC4Q8TBB5 520 aa28.93■■■□□ 2.22
CNEP1R1-209ENST00000567712 CD99L2Q8TCZ2 262 aa28.93■■■□□ 2.22
CNEP1R1-209ENST00000567712 OPTNQ96CV9 577 aa28.93■■■□□ 2.22
CNEP1R1-209ENST00000567712 MS4A4AQ96JQ5 239 aa28.93■■■□□ 2.22
CNEP1R1-209ENST00000567712 VGLL2Q8N8G2 317 aa28.92■■■□□ 2.22
CNEP1R1-209ENST00000567712 MROH5Q6ZUA9 1318 aa28.92■■■□□ 2.22
CNEP1R1-209ENST00000567712 POTEFA5A3E0 1075 aa28.9■■■□□ 2.22
CNEP1R1-209ENST00000567712 CACNB3P54284 484 aa28.9■■■□□ 2.22
CNEP1R1-209ENST00000567712 CHAF1AQ13111 956 aaPredicted RBP28.9■■■□□ 2.22
CNEP1R1-209ENST00000567712 TNFAIP1Q13829 316 aa28.9■■■□□ 2.22
CNEP1R1-209ENST00000567712 ZNF316A6NFI3 1004 aaPredicted RBP28.89■■■□□ 2.22
CNEP1R1-209ENST00000567712 BCAMP50895 628 aa28.88■■■□□ 2.21
CNEP1R1-209ENST00000567712 VGLL4Q14135 290 aa28.88■■■□□ 2.21
CNEP1R1-209ENST00000567712 METTL24Q5JXM2 366 aa28.88■■■□□ 2.21
CNEP1R1-209ENST00000567712 BRI3BPQ8WY22 251 aa28.88■■■□□ 2.21
CNEP1R1-209ENST00000567712 PTPN22Q9Y2R2 807 aa28.88■■■□□ 2.21
CNEP1R1-209ENST00000567712 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.87■■■□□ 2.21
CNEP1R1-209ENST00000567712 RBBP6Q7Z6E9 1792 aaKnown RBP28.87■■■□□ 2.21
CNEP1R1-209ENST00000567712 ZSWIM8A7E2V4 1837 aa28.86■■■□□ 2.21
CNEP1R1-209ENST00000567712 PDE8BO95263 885 aa28.86■■■□□ 2.21
CNEP1R1-209ENST00000567712 ERO1AQ96HE7 468 aa28.86■■■□□ 2.21
CNEP1R1-209ENST00000567712 MYH13Q9UKX3 1938 aa28.85■■■□□ 2.21
CNEP1R1-209ENST00000567712 MAP3K9P80192 1104 aa28.85■■■□□ 2.21
CNEP1R1-209ENST00000567712 OTUD7BQ6GQQ9 843 aa28.85■■■□□ 2.21
CNEP1R1-209ENST00000567712 VPS37DQ86XT2 251 aa28.85■■■□□ 2.21
CNEP1R1-209ENST00000567712 USP44Q9H0E7 712 aa28.85■■■□□ 2.21
CNEP1R1-209ENST00000567712 SP3Q02447 781 aa28.84■■■□□ 2.21
CNEP1R1-209ENST00000567712 HDLBPQ00341 1268 aaKnown RBP28.83■■■□□ 2.21
CNEP1R1-209ENST00000567712 FAM43AQ8N2R8 423 aa28.83■■■□□ 2.21
CNEP1R1-209ENST00000567712 SSH1Q8WYL5 1049 aa28.83■■■□□ 2.21
CNEP1R1-209ENST00000567712 FGFR2P21802 821 aa28.82■■■□□ 2.2
CNEP1R1-209ENST00000567712 APOBEC3HQ6NTF7 200 aaKnown RBP28.82■■■□□ 2.2
CNEP1R1-209ENST00000567712 EFCC1Q9HA90 598 aa28.82■■■□□ 2.2
CNEP1R1-209ENST00000567712 CCL15-CCL14A0A0B4J2E2 113 aa28.81■■■□□ 2.2
CNEP1R1-209ENST00000567712 RFX5P48382 616 aaPredicted RBP28.81■■■□□ 2.2
CNEP1R1-209ENST00000567712 TNNI2P48788 182 aa28.81■■■□□ 2.2
CNEP1R1-209ENST00000567712 CCL15Q16663 113 aa28.81■■■□□ 2.2
CNEP1R1-209ENST00000567712 CAVIN4Q5BKX8 364 aa28.81■■■□□ 2.2
CNEP1R1-209ENST00000567712 TBC1D22AQ8WUA7 517 aa28.81■■■□□ 2.2
CNEP1R1-209ENST00000567712 TEKT1Q969V4 418 aa28.81■■■□□ 2.2
CNEP1R1-209ENST00000567712 OTUD5Q96G74 571 aa28.81■■■□□ 2.2
CNEP1R1-209ENST00000567712 SNCAIPQ9Y6H5 919 aa28.81■■■□□ 2.2
CNEP1R1-209ENST00000567712 FRAT2O75474 233 aaPredicted RBP28.8■■■□□ 2.2
CNEP1R1-209ENST00000567712 ZDHHC15Q96MV8 337 aa28.8■■■□□ 2.2
CNEP1R1-209ENST00000567712 PTPRCP08575 1304 aa28.79■■■□□ 2.2
CNEP1R1-209ENST00000567712 ARMC5Q96C12 935 aa28.79■■■□□ 2.2
CNEP1R1-209ENST00000567712 GTF2A2P52657 109 aa28.78■■■□□ 2.2
CNEP1R1-209ENST00000567712 TAF1CQ15572 869 aaPredicted RBP28.78■■■□□ 2.2
CNEP1R1-209ENST00000567712 INTS3Q68E01 1043 aaKnown RBP28.78■■■□□ 2.2
CNEP1R1-209ENST00000567712 ZKSCAN4Q969J2 545 aaPredicted RBP28.78■■■□□ 2.2
CNEP1R1-209ENST00000567712 CSADQ9Y600 493 aa28.78■■■□□ 2.2
CNEP1R1-209ENST00000567712 SPDYE5A6NIY4 337 aa28.77■■■□□ 2.2
CNEP1R1-209ENST00000567712 EN2P19622 333 aaPredicted RBP28.77■■■□□ 2.2
CNEP1R1-209ENST00000567712 MRIQ9BWK5 157 aa28.77■■■□□ 2.2
CNEP1R1-209ENST00000567712 AK9Q5TCS8 1911 aa28.77■■■□□ 2.2
CNEP1R1-209ENST00000567712 PUM3Q15397 648 aaKnown RBP28.76■■■□□ 2.19
CNEP1R1-209ENST00000567712 ATG9AQ7Z3C6 839 aa28.75■■■□□ 2.19
CNEP1R1-209ENST00000567712 FAM83AQ86UY5 434 aa28.75■■■□□ 2.19
CNEP1R1-209ENST00000567712 WRNIP1Q96S55 665 aa28.75■■■□□ 2.19
CNEP1R1-209ENST00000567712 ZFYVE28Q9HCC9 887 aa28.75■■■□□ 2.19
CNEP1R1-209ENST00000567712 PCDH10Q9P2E7 1040 aa28.75■■■□□ 2.19
CNEP1R1-209ENST00000567712 KIF16BQ96L93 1317 aa28.74■■■□□ 2.19
CNEP1R1-209ENST00000567712 EYA2O00167 538 aa28.74■■■□□ 2.19
CNEP1R1-209ENST00000567712 IRF6O14896 467 aa28.74■■■□□ 2.19
CNEP1R1-209ENST00000567712 ARHGAP39Q9C0H5 1083 aa28.74■■■□□ 2.19
CNEP1R1-209ENST00000567712 PTCH2Q9Y6C5 1203 aa28.74■■■□□ 2.19
CNEP1R1-209ENST00000567712 IFIT1P09914 478 aaKnown RBP28.73■■■□□ 2.19
CNEP1R1-209ENST00000567712 SLFN5Q08AF3 891 aa28.73■■■□□ 2.19
CNEP1R1-209ENST00000567712 HHIPL2Q6UWX4 724 aa28.73■■■□□ 2.19
CNEP1R1-209ENST00000567712 MIGA2Q7L4E1 593 aa28.73■■■□□ 2.19
CNEP1R1-209ENST00000567712 BTBD19C9JJ37 291 aa28.72■■■□□ 2.19
CNEP1R1-209ENST00000567712 FKBP1CQ5VVH2 108 aa28.72■■■□□ 2.19
CNEP1R1-209ENST00000567712 ERO1BQ86YB8 467 aa28.72■■■□□ 2.19
CNEP1R1-209ENST00000567712 CDCA7LQ96GN5 454 aa28.72■■■□□ 2.19
CNEP1R1-209ENST00000567712 ZNF333Q96JL9 665 aa28.72■■■□□ 2.19
CNEP1R1-209ENST00000567712 SUGT1Q9Y2Z0 365 aa28.72■■■□□ 2.19
CNEP1R1-209ENST00000567712 E9PSI1 815 aa28.71■■■□□ 2.19
CNEP1R1-209ENST00000567712 INPP5BP32019 993 aa28.71■■■□□ 2.19
CNEP1R1-209ENST00000567712 TMOD2Q9NZR1 351 aa28.71■■■□□ 2.19
CNEP1R1-209ENST00000567712 DIXDC1Q155Q3 683 aa28.7■■■□□ 2.18
CNEP1R1-209ENST00000567712 DAGLAQ9Y4D2 1042 aa28.7■■■□□ 2.18
CNEP1R1-209ENST00000567712 MAST3O60307 1309 aa28.69■■■□□ 2.18
CNEP1R1-209ENST00000567712 CETPP11597 493 aa28.69■■■□□ 2.18
CNEP1R1-209ENST00000567712 SLC5A1P13866 664 aa28.69■■■□□ 2.18
CNEP1R1-209ENST00000567712 LPIN2Q92539 896 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms