RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 DLGAP3O95886 979 aa8.1□□□□□ -1.11
SHCBP1-206ENST00000567698 TCF3P15923 654 aa8.1□□□□□ -1.11
SHCBP1-206ENST00000567698 RAD51AP2Q09MP3 1159 aa8.1□□□□□ -1.11
SHCBP1-206ENST00000567698 ZNF252P-AS1Q0IIN9 211 aa8.1□□□□□ -1.11
SHCBP1-206ENST00000567698 CCDC85BQ15834 202 aaPredicted RBP8.1□□□□□ -1.11
SHCBP1-206ENST00000567698 COPRSQ9NQ92 184 aa8.1□□□□□ -1.11
SHCBP1-206ENST00000567698 CACNA2D2Q9NY47 1150 aa8.1□□□□□ -1.11
SHCBP1-206ENST00000567698 CD68P34810 354 aaPredicted RBP8.09□□□□□ -1.11
SHCBP1-206ENST00000567698 ZNF76P36508 570 aa8.09□□□□□ -1.11
SHCBP1-206ENST00000567698 SUZ12Q15022 739 aaKnown RBP8.09□□□□□ -1.11
SHCBP1-206ENST00000567698 SCARF2Q96GP6 870 aaPredicted RBP8.09□□□□□ -1.11
SHCBP1-206ENST00000567698 RSRP1Q9BUV0 290 aa8.09□□□□□ -1.11
SHCBP1-206ENST00000567698 STK17AQ9UEE5 414 aa8.09□□□□□ -1.11
SHCBP1-206ENST00000567698 LOC100289279A0A1B0GTE1 492 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 ELNP15502 786 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 SELPP16109 830 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 NME2P22392 152 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 GSTM4Q03013 218 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 C9orf131Q5VYM1 1079 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 PCNX4Q63HM2 1172 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 FAM117BQ6P1L5 589 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 PODNQ7Z5L7 613 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 PHC3Q8NDX5 983 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 BCL11AQ9H165 835 aa8.08□□□□□ -1.12
SHCBP1-206ENST00000567698 FAM177BA6PVY3 158 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 LIG3P49916 1009 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 NLRP12P59046 1061 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 RAC1P63000 192 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 RACK1P63244 317 aaKnown RBP8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 GRIK4Q16099 956 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 MPRIPQ6WCQ1 1025 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 AGMOQ6ZNB7 445 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 SULF2Q8IWU5 870 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 GRIN3AQ8TCU5 1115 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 UBASH3BQ8TF42 649 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 RNF34Q969K3 372 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 RHOVQ96L33 236 aa8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 NOP53Q9NZM5 478 aaKnown RBP8.07□□□□□ -1.12
SHCBP1-206ENST00000567698 F6X3S4 739 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 PIK3R2O00459 728 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 TFE3P19532 575 aaPredicted RBP8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 GARTP22102 1010 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 ARNTP27540 789 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 PPP2R3AQ06190 1150 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 TRIM28Q13263 835 aaKnown RBP8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 AP3B2Q13367 1082 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 TTBK2Q6IQ55 1244 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 KIAA1211Q6ZU35 1233 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 GAL3ST3Q96A11 431 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 KBTBD4Q9NVX7 518 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 TLR6Q9Y2C9 796 aa8.06□□□□□ -1.12
SHCBP1-206ENST00000567698 SPDYE3A6NKU9 549 aa8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 GSTP1P09211 210 aaKnown RBP8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 SPATA31C1P0DKV0 1188 aa8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 MAOBP27338 520 aa8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 ARL4DP49703 201 aa8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 RPS26P62854 115 aaKnown RBP8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 MAP3K11Q16584 847 aa8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 ZNF394Q53GI3 561 aa8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 NT5DC4Q86YG4 428 aa8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 KCNQ5Q9NR82 932 aa8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 GGT7Q9UJ14 662 aa8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 DDX41Q9UJV9 622 aaKnown RBP8.05□□□□□ -1.12
SHCBP1-206ENST00000567698 ZNF862O60290 1169 aa8.04□□□□□ -1.12
SHCBP1-206ENST00000567698 PTPN11Q06124 597 aaPredicted RBP8.04□□□□□ -1.12
SHCBP1-206ENST00000567698 POU4F3Q15319 338 aa8.04□□□□□ -1.12
SHCBP1-206ENST00000567698 IGF2-ASQ6U949 168 aa8.04□□□□□ -1.12
SHCBP1-206ENST00000567698 HS2ST1Q7LGA3 356 aa8.04□□□□□ -1.12
SHCBP1-206ENST00000567698 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.04□□□□□ -1.12
SHCBP1-206ENST00000567698 TMEM74Q96NL1 305 aa8.04□□□□□ -1.12
SHCBP1-206ENST00000567698 CCDC86Q9H6F5 360 aaKnown RBP8.04□□□□□ -1.12
SHCBP1-206ENST00000567698 PCDHB5Q9Y5E4 795 aa8.04□□□□□ -1.12
SHCBP1-206ENST00000567698 PCDHGB7Q9Y5F8 929 aa8.04□□□□□ -1.12
SHCBP1-206ENST00000567698 KRBA1A5PL33 1030 aa8.03□□□□□ -1.12
SHCBP1-206ENST00000567698 CYP11A1P05108 521 aa8.03□□□□□ -1.12
SHCBP1-206ENST00000567698 PRRT3Q5FWE3 981 aa8.03□□□□□ -1.12
SHCBP1-206ENST00000567698 LENG1Q96BZ8 264 aaPredicted RBP8.03□□□□□ -1.12
SHCBP1-206ENST00000567698 WDR89Q96FK6 387 aaPredicted RBP8.03□□□□□ -1.12
SHCBP1-206ENST00000567698 ADAMTS1Q9UHI8 967 aa8.03□□□□□ -1.12
SHCBP1-206ENST00000567698 ITGB2P05107 769 aa8.02□□□□□ -1.13
SHCBP1-206ENST00000567698 Q6ZS46 218 aa8.02□□□□□ -1.13
SHCBP1-206ENST00000567698 TMEM130Q8N3G9 435 aa8.02□□□□□ -1.13
SHCBP1-206ENST00000567698 USP26Q9BXU7 913 aa8.02□□□□□ -1.13
SHCBP1-206ENST00000567698 TMPRSS13Q9BYE2 586 aa8.02□□□□□ -1.13
SHCBP1-206ENST00000567698 CYP8B1Q9UNU6 501 aa8.02□□□□□ -1.13
SHCBP1-206ENST00000567698 PCDHGC5Q9Y5F6 944 aa8.02□□□□□ -1.13
SHCBP1-206ENST00000567698 FAM181BA6NEQ2 426 aa8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 F8W735 103 aaPredicted RBP8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 PF4P02776 101 aa8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 RLBP1P12271 317 aa8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 LMNB2Q03252 620 aa8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 LLGL2Q6P1M3 1020 aa8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 DDX54Q8TDD1 881 aaKnown RBP8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 DCAF5Q96JK2 942 aa8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 ZC3H12CQ9C0D7 883 aaKnown RBP8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 MRPL18Q9H0U6 180 aaKnown RBP8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 KRT82Q9NSB4 513 aa8.01□□□□□ -1.13
SHCBP1-206ENST00000567698 MEGF11A6BM72 1044 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms