RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 ATP2B3Q16720 1220 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 NBPF12Q5TAG4 269 aaPredicted RBP9.38□□□□□ -0.91
GINS3-207ENST00000567400 TBC1D22AQ8WUA7 517 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 TEPSINQ96N21 525 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 CSRNP1Q96S65 589 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 TDRD3Q9H7E2 651 aaKnown RBP9.38□□□□□ -0.91
GINS3-207ENST00000567400 VEZTQ9HBM0 779 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 ZNF70Q9UC06 446 aaPredicted RBP9.38□□□□□ -0.91
GINS3-207ENST00000567400 PPP2R3BQ9Y5P8 575 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 CASP8AP2Q9UKL3 1982 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 HTTP42858 3142 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 MYO1BO43795 1136 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 CAPN15O75808 1086 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 IL15P40933 162 aaPredicted RBP9.37□□□□□ -0.91
GINS3-207ENST00000567400 RASA3Q14644 834 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 MAP3K11Q16584 847 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 ZKSCAN2Q63HK3 967 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 APOBEC3HQ6NTF7 200 aaKnown RBP9.37□□□□□ -0.91
GINS3-207ENST00000567400 CLMNQ96JQ2 1002 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 RNF186Q9NXI6 227 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 ANGEL1Q9UNK9 670 aaKnown RBP9.37□□□□□ -0.91
GINS3-207ENST00000567400 AKAP11Q9UKA4 1901 aa9.37□□□□□ -0.91
GINS3-207ENST00000567400 FRAT2O75474 233 aaPredicted RBP9.36□□□□□ -0.91
GINS3-207ENST00000567400 GNAI2P04899 355 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 PRDX5P30044 214 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 NF2P35240 595 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 CACNB3P54284 484 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 HDLBPQ00341 1268 aaKnown RBP9.36□□□□□ -0.91
GINS3-207ENST00000567400 TFCP2Q12800 502 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 RASGRF1Q13972 1273 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 TTLL12Q14166 644 aaPredicted RBP9.36□□□□□ -0.91
GINS3-207ENST00000567400 ZDHHC15Q96MV8 337 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 TMEM39BQ9GZU3 492 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 SAGE1Q9NXZ1 904 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 HDAC5Q9UQL6 1122 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 SUGT1Q9Y2Z0 365 aa9.36□□□□□ -0.91
GINS3-207ENST00000567400 TCP10L2B9ZVM9 353 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 ZBTB22O15209 634 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 TRPA1O75762 1119 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 GJA5P36382 358 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 TIMM10P62072 90 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
GINS3-207ENST00000567400 POLA2Q14181 598 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 DIXDC1Q155Q3 683 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 SPRYD7Q5W111 196 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 CCDC102BQ68D86 513 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 ARMC9Q7Z3E5 817 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 TEKT1Q969V4 418 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 MRIQ9BWK5 157 aa9.35□□□□□ -0.91
GINS3-207ENST00000567400 SALL1Q9NSC2 1324 aa9.34□□□□□ -0.91
GINS3-207ENST00000567400 A0A1B0GUL7 405 aa9.34□□□□□ -0.91
GINS3-207ENST00000567400 ZBTB7BO15156 539 aaPredicted RBP9.34□□□□□ -0.91
GINS3-207ENST00000567400 USP2O75604 605 aaPredicted RBP9.34□□□□□ -0.91
GINS3-207ENST00000567400 TNFAIP1Q13829 316 aa9.34□□□□□ -0.91
GINS3-207ENST00000567400 HHIPL2Q6UWX4 724 aa9.34□□□□□ -0.91
GINS3-207ENST00000567400 PI16Q6UXB8 463 aa9.34□□□□□ -0.91
GINS3-207ENST00000567400 WDR66Q8TBY9 1149 aa9.34□□□□□ -0.91
GINS3-207ENST00000567400 C1orf115Q9H7X2 142 aa9.34□□□□□ -0.91
GINS3-207ENST00000567400 DAGLAQ9Y4D2 1042 aa9.34□□□□□ -0.91
GINS3-207ENST00000567400 RFX7Q2KHR2 1363 aa9.34□□□□□ -0.91
GINS3-207ENST00000567400 MAST3O60307 1309 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 SEMA3EO15041 775 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 PPP1R12BO60237 982 aaPredicted RBP9.33□□□□□ -0.92
GINS3-207ENST00000567400 TM4SF4P48230 202 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 SUPT20HL1Q3ZLR7 823 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.33□□□□□ -0.92
GINS3-207ENST00000567400 ITPRIPQ8IWB1 547 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 PANK1Q8TE04 598 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 SSH3Q8TE77 659 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 ZNF384Q8TF68 577 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 XAGE2Q96GT9 111 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 ABHD8Q96I13 439 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 R3HDMLQ9H3Y0 253 aa9.33□□□□□ -0.92
GINS3-207ENST00000567400 RPAP1Q9BWH6 1393 aaPredicted RBP9.33□□□□□ -0.92
GINS3-207ENST00000567400 PDS5AQ29RF7 1337 aaKnown RBP9.32□□□□□ -0.92
GINS3-207ENST00000567400 TBC1D8O95759 1140 aa9.32□□□□□ -0.92
GINS3-207ENST00000567400 NFIAQ12857 509 aa9.32□□□□□ -0.92
GINS3-207ENST00000567400 FKBP1CQ5VVH2 108 aa9.32□□□□□ -0.92
GINS3-207ENST00000567400 CDC42EP5Q6NZY7 148 aa9.32□□□□□ -0.92
GINS3-207ENST00000567400 FTSJ3Q8IY81 847 aaKnown RBP9.32□□□□□ -0.92
GINS3-207ENST00000567400 REM2Q8IYK8 340 aaPredicted RBP9.32□□□□□ -0.92
GINS3-207ENST00000567400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.32□□□□□ -0.92
GINS3-207ENST00000567400 CNKSR2Q8WXI2 1034 aa9.32□□□□□ -0.92
GINS3-207ENST00000567400 WNK4Q96J92 1243 aa9.32□□□□□ -0.92
GINS3-207ENST00000567400 MCOLN1Q9GZU1 580 aa9.32□□□□□ -0.92
GINS3-207ENST00000567400 GNL3LQ9NVN8 582 aaKnown RBP9.32□□□□□ -0.92
GINS3-207ENST00000567400 DENND2AQ9ULE3 1009 aa9.32□□□□□ -0.92
GINS3-207ENST00000567400 MYH2Q9UKX2 1941 aa9.32□□□□□ -0.92
GINS3-207ENST00000567400 CENPFP49454 3210 aa9.32□□□□□ -0.92
GINS3-207ENST00000567400 GAKO14976 1311 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 UNCXA6NJT0 531 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 IGF2BP3O00425 579 aaKnown RBP eCLIP9.31□□□□□ -0.92
GINS3-207ENST00000567400 LDHBP07195 334 aaKnown RBP9.31□□□□□ -0.92
GINS3-207ENST00000567400 ZBTB48P10074 688 aaPredicted RBP9.31□□□□□ -0.92
GINS3-207ENST00000567400 MCAMP43121 646 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 IREB2P48200 963 aaKnown RBP9.31□□□□□ -0.92
GINS3-207ENST00000567400 ATP8B2P98198 1209 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 VGLL4Q14135 290 aa9.31□□□□□ -0.92
GINS3-207ENST00000567400 FAM83AQ86UY5 434 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms