RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 CDC37L1Q7L3B6 337 aa18.51■□□□□ 0.55
COMMD4-219ENST00000567399 SULF1Q8IWU6 871 aa18.51■□□□□ 0.55
COMMD4-219ENST00000567399 ZNF512BQ96KM6 892 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-219ENST00000567399 GGA3Q9NZ52 723 aa18.51■□□□□ 0.55
COMMD4-219ENST00000567399 RAI14Q9P0K7 980 aa18.51■□□□□ 0.55
COMMD4-219ENST00000567399 SERPINA10Q9UK55 444 aa18.51■□□□□ 0.55
COMMD4-219ENST00000567399 PRDX5P30044 214 aa18.5■□□□□ 0.55
COMMD4-219ENST00000567399 HDLBPQ00341 1268 aaKnown RBP18.5■□□□□ 0.55
COMMD4-219ENST00000567399 B4GALNT3Q6L9W6 998 aa18.5■□□□□ 0.55
COMMD4-219ENST00000567399 PI16Q6UXB8 463 aa18.5■□□□□ 0.55
COMMD4-219ENST00000567399 TBC1D9Q6ZT07 1266 aa18.5■□□□□ 0.55
COMMD4-219ENST00000567399 KRT26Q7Z3Y9 468 aa18.5■□□□□ 0.55
COMMD4-219ENST00000567399 USP48Q86UV5 1035 aa18.5■□□□□ 0.55
COMMD4-219ENST00000567399 SLF2Q8IX21 1173 aa18.5■□□□□ 0.55
COMMD4-219ENST00000567399 MYH13Q9UKX3 1938 aa18.49■□□□□ 0.55
COMMD4-219ENST00000567399 ZBTB22O15209 634 aa18.49■□□□□ 0.55
COMMD4-219ENST00000567399 ZAP70P43403 619 aa18.49■□□□□ 0.55
COMMD4-219ENST00000567399 MTMR14Q8NCE2 650 aa18.49■□□□□ 0.55
COMMD4-219ENST00000567399 PRMT6Q96LA8 375 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-219ENST00000567399 GLIS2Q9BZE0 524 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-219ENST00000567399 PGAP2Q9UHJ9 254 aa18.49■□□□□ 0.55
COMMD4-219ENST00000567399 COL1A1P02452 1464 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-219ENST00000567399 SPDYE2BA6NHP3 402 aa18.48■□□□□ 0.55
COMMD4-219ENST00000567399 IGHDP01880 384 aa18.48■□□□□ 0.55
COMMD4-219ENST00000567399 SPDYE6P0CI01 402 aa18.48■□□□□ 0.55
COMMD4-219ENST00000567399 DNAJC2Q99543 621 aaKnown RBP18.48■□□□□ 0.55
COMMD4-219ENST00000567399 MRIQ9BWK5 157 aa18.48■□□□□ 0.55
COMMD4-219ENST00000567399 VEZTQ9HBM0 779 aa18.48■□□□□ 0.55
COMMD4-219ENST00000567399 ASTN2O75129 1339 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-219ENST00000567399 ZNF646O15015 1829 aaPredicted RBP18.47■□□□□ 0.55
COMMD4-219ENST00000567399 CLRN2A0PK11 232 aa18.47■□□□□ 0.55
COMMD4-219ENST00000567399 LDHCP07864 332 aa18.47■□□□□ 0.55
COMMD4-219ENST00000567399 GSTO1P78417 241 aa18.47■□□□□ 0.55
COMMD4-219ENST00000567399 BOLA2Q9H3K6 86 aa18.47■□□□□ 0.55
COMMD4-219ENST00000567399 ZNF408Q9H9D4 720 aa18.47■□□□□ 0.55
COMMD4-219ENST00000567399 TMOD2Q9NZR1 351 aa18.47■□□□□ 0.55
COMMD4-219ENST00000567399 PCDHAC2Q9Y5I4 1007 aa18.47■□□□□ 0.55
COMMD4-219ENST00000567399 ITGBL1O95965 494 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-219ENST00000567399 CYP2E1P05181 493 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-219ENST00000567399 TTF1Q15361 905 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-219ENST00000567399 DIXDC1Q155Q3 683 aa18.46■□□□□ 0.55
COMMD4-219ENST00000567399 HHIPL2Q6UWX4 724 aa18.46■□□□□ 0.55
COMMD4-219ENST00000567399 APOBEC3FQ8IUX4 373 aaKnown RBP18.46■□□□□ 0.55
COMMD4-219ENST00000567399 NOL10Q9BSC4 688 aaKnown RBP18.46■□□□□ 0.55
COMMD4-219ENST00000567399 TDRD3Q9H7E2 651 aaKnown RBP18.46■□□□□ 0.55
COMMD4-219ENST00000567399 ECHDC1Q9NTX5 307 aa18.46■□□□□ 0.55
COMMD4-219ENST00000567399 PITPNM2Q9BZ72 1349 aa18.46■□□□□ 0.55
COMMD4-219ENST00000567399 ADM5C9JUS6 153 aa18.45■□□□□ 0.54
COMMD4-219ENST00000567399 TRAF5O00463 557 aa18.45■□□□□ 0.54
COMMD4-219ENST00000567399 IDH1O75874 414 aaKnown RBP18.45■□□□□ 0.54
COMMD4-219ENST00000567399 HSPA6P17066 643 aa18.45■□□□□ 0.54
COMMD4-219ENST00000567399 ATP5JP18859 108 aa18.45■□□□□ 0.54
COMMD4-219ENST00000567399 APLP1P51693 650 aa18.45■□□□□ 0.54
COMMD4-219ENST00000567399 MECOMQ03112 1051 aa18.45■□□□□ 0.54
COMMD4-219ENST00000567399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.45■□□□□ 0.54
COMMD4-219ENST00000567399 ZBED3Q96IU2 234 aaPredicted RBP18.45■□□□□ 0.54
COMMD4-219ENST00000567399 ZDHHC15Q96MV8 337 aa18.45■□□□□ 0.54
COMMD4-219ENST00000567399 SCAF8Q9UPN6 1271 aaKnown RBP18.45■□□□□ 0.54
COMMD4-219ENST00000567399 NDUFB9Q9Y6M9 179 aa18.45■□□□□ 0.54
COMMD4-219ENST00000567399 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
COMMD4-219ENST00000567399 NAA16Q6N069 864 aaPredicted RBP18.44■□□□□ 0.54
COMMD4-219ENST00000567399 ZNF70Q9UC06 446 aaPredicted RBP18.44■□□□□ 0.54
COMMD4-219ENST00000567399 GOLIM4O00461 696 aa18.43■□□□□ 0.54
COMMD4-219ENST00000567399 ERC2O15083 957 aa18.43■□□□□ 0.54
COMMD4-219ENST00000567399 TNNI2P48788 182 aa18.43■□□□□ 0.54
COMMD4-219ENST00000567399 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
COMMD4-219ENST00000567399 TNFAIP1Q13829 316 aa18.43■□□□□ 0.54
COMMD4-219ENST00000567399 SMC5Q8IY18 1101 aa18.43■□□□□ 0.54
COMMD4-219ENST00000567399 LNPKQ9C0E8 428 aa18.43■□□□□ 0.54
COMMD4-219ENST00000567399 PIH1D3Q9NQM4 214 aaKnown RBP18.43■□□□□ 0.54
COMMD4-219ENST00000567399 DAGLAQ9Y4D2 1042 aa18.43■□□□□ 0.54
COMMD4-219ENST00000567399 TCP10L2B9ZVM9 353 aa18.42■□□□□ 0.54
COMMD4-219ENST00000567399 CELF2O95319 508 aaKnown RBP18.42■□□□□ 0.54
COMMD4-219ENST00000567399 NF2P35240 595 aa18.42■□□□□ 0.54
COMMD4-219ENST00000567399 FMR1Q06787 632 aaKnown RBP eCLIP18.42■□□□□ 0.54
COMMD4-219ENST00000567399 SPDYE2Q495Y8 402 aa18.42■□□□□ 0.54
COMMD4-219ENST00000567399 ANTXR1Q9H6X2 564 aa18.42■□□□□ 0.54
COMMD4-219ENST00000567399 USP40Q9NVE5 1235 aa18.42■□□□□ 0.54
COMMD4-219ENST00000567399 PAG1Q9NWQ8 432 aa18.42■□□□□ 0.54
COMMD4-219ENST00000567399 PASKQ96RG2 1323 aa18.42■□□□□ 0.54
COMMD4-219ENST00000567399 TMEM88BA6NKF7 163 aa18.41■□□□□ 0.54
COMMD4-219ENST00000567399 MX1P20591 662 aa18.41■□□□□ 0.54
COMMD4-219ENST00000567399 APOBEC3HQ6NTF7 200 aaKnown RBP18.41■□□□□ 0.54
COMMD4-219ENST00000567399 DLK2Q6UY11 383 aa18.41■□□□□ 0.54
COMMD4-219ENST00000567399 CHD1LQ86WJ1 897 aa18.41■□□□□ 0.54
COMMD4-219ENST00000567399 NSUN4Q96CB9 384 aaKnown RBP18.41■□□□□ 0.54
COMMD4-219ENST00000567399 HAUS7Q99871 368 aa18.41■□□□□ 0.54
COMMD4-219ENST00000567399 DEFB129Q9H1M3 183 aa18.41■□□□□ 0.54
COMMD4-219ENST00000567399 ABT1Q9ULW3 272 aaKnown RBP18.41■□□□□ 0.54
COMMD4-219ENST00000567399 MROH7-TTC4A0A0A0MT08 1334 aa18.41■□□□□ 0.54
COMMD4-219ENST00000567399 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
COMMD4-219ENST00000567399 IGSF3O75054 1194 aa18.4■□□□□ 0.54
COMMD4-219ENST00000567399 BAG3O95817 575 aa18.4■□□□□ 0.54
COMMD4-219ENST00000567399 CYP7A1P22680 504 aa18.4■□□□□ 0.54
COMMD4-219ENST00000567399 BTDP43251 543 aa18.4■□□□□ 0.54
COMMD4-219ENST00000567399 PRAMEF18Q5VWM3 479 aa18.4■□□□□ 0.54
COMMD4-219ENST00000567399 TSHZ3Q63HK5 1081 aa18.4■□□□□ 0.54
COMMD4-219ENST00000567399 MAGEB6Q8N7X4 407 aa18.4■□□□□ 0.54
COMMD4-219ENST00000567399 CDCA5Q96FF9 252 aa18.4■□□□□ 0.54
COMMD4-219ENST00000567399 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms