RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 CCDC158Q5M9N0 1113 aa20.48■□□□□ 0.87
CLN6-208ENST00000567060 GORABQ5T7V8 394 aa20.48■□□□□ 0.87
CLN6-208ENST00000567060 USP17L1Q7RTZ2 530 aa20.48■□□□□ 0.87
CLN6-208ENST00000567060 EAF2Q96CJ1 260 aaPredicted RBP20.48■□□□□ 0.87
CLN6-208ENST00000567060 GBA2Q9HCG7 927 aaPredicted RBP20.48■□□□□ 0.87
CLN6-208ENST00000567060 PCDH10Q9P2E7 1040 aa20.48■□□□□ 0.87
CLN6-208ENST00000567060 PDE4DIPQ5VU43 2346 aa20.47■□□□□ 0.87
CLN6-208ENST00000567060 IGSF3O75054 1194 aa20.47■□□□□ 0.87
CLN6-208ENST00000567060 IFIT2P09913 472 aaKnown RBP20.47■□□□□ 0.87
CLN6-208ENST00000567060 RPS12P25398 132 aaKnown RBP20.47■□□□□ 0.87
CLN6-208ENST00000567060 RBM26Q5T8P6 1007 aaKnown RBP20.47■□□□□ 0.87
CLN6-208ENST00000567060 CCDC102BQ68D86 513 aa20.47■□□□□ 0.87
CLN6-208ENST00000567060 AACSQ86V21 672 aa20.47■□□□□ 0.87
CLN6-208ENST00000567060 RNF186Q9NXI6 227 aa20.47■□□□□ 0.87
CLN6-208ENST00000567060 DENND2AQ9ULE3 1009 aa20.47■□□□□ 0.87
CLN6-208ENST00000567060 FAM205AQ6ZU69 1335 aa20.47■□□□□ 0.87
CLN6-208ENST00000567060 VIL1P09327 827 aaKnown RBP20.46■□□□□ 0.87
CLN6-208ENST00000567060 BCAMP50895 628 aa20.46■□□□□ 0.87
CLN6-208ENST00000567060 C2orf69Q8N8R5 385 aa20.46■□□□□ 0.87
CLN6-208ENST00000567060 TBC1D22AQ8WUA7 517 aa20.46■□□□□ 0.87
CLN6-208ENST00000567060 CCDC102AQ96A19 550 aa20.46■□□□□ 0.87
CLN6-208ENST00000567060 IL1RAPL2Q9NP60 686 aa20.46■□□□□ 0.87
CLN6-208ENST00000567060 SAGE1Q9NXZ1 904 aa20.46■□□□□ 0.87
CLN6-208ENST00000567060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.46■□□□□ 0.87
CLN6-208ENST00000567060 SCN9AQ15858 1988 aa20.45■□□□□ 0.86
CLN6-208ENST00000567060 FRAT2O75474 233 aaPredicted RBP20.45■□□□□ 0.86
CLN6-208ENST00000567060 TRPA1O75762 1119 aa20.45■□□□□ 0.86
CLN6-208ENST00000567060 IGHDP01880 384 aa20.45■□□□□ 0.86
CLN6-208ENST00000567060 ARID4AP29374 1257 aaPredicted RBP20.45■□□□□ 0.86
CLN6-208ENST00000567060 ZNF157P51786 506 aaPredicted RBP20.45■□□□□ 0.86
CLN6-208ENST00000567060 TTLL5Q6EMB2 1281 aa20.45■□□□□ 0.86
CLN6-208ENST00000567060 AGBL3Q8NEM8 1001 aa20.45■□□□□ 0.86
CLN6-208ENST00000567060 DBNLQ9UJU6 430 aaKnown RBP20.45■□□□□ 0.86
CLN6-208ENST00000567060 APBB1O00213 710 aa20.44■□□□□ 0.86
CLN6-208ENST00000567060 ADORA1P30542 326 aa20.44■□□□□ 0.86
CLN6-208ENST00000567060 WDR66Q8TBY9 1149 aa20.44■□□□□ 0.86
CLN6-208ENST00000567060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLN6-208ENST00000567060 DCPSQ96C86 337 aaKnown RBP20.44■□□□□ 0.86
CLN6-208ENST00000567060 GPATCH3Q96I76 525 aa20.44■□□□□ 0.86
CLN6-208ENST00000567060 CSRNP1Q96S65 589 aa20.44■□□□□ 0.86
CLN6-208ENST00000567060 DBNDD2Q9BQY9 259 aa20.44■□□□□ 0.86
CLN6-208ENST00000567060 SUGT1Q9Y2Z0 365 aa20.44■□□□□ 0.86
CLN6-208ENST00000567060 MYH13Q9UKX3 1938 aa20.44■□□□□ 0.86
CLN6-208ENST00000567060 ASTN2O75129 1339 aaPredicted RBP20.44■□□□□ 0.86
CLN6-208ENST00000567060 PHKA1P46020 1223 aa20.43■□□□□ 0.86
CLN6-208ENST00000567060 RSBN1LQ6PCB5 846 aaPredicted RBP20.43■□□□□ 0.86
CLN6-208ENST00000567060 ZGPATQ8N5A5 531 aaKnown RBP20.43■□□□□ 0.86
CLN6-208ENST00000567060 SLC10A3P09131 477 aa20.42■□□□□ 0.86
CLN6-208ENST00000567060 SOX10P56693 466 aa20.42■□□□□ 0.86
CLN6-208ENST00000567060 GTF2IP78347 998 aa20.42■□□□□ 0.86
CLN6-208ENST00000567060 TTC39AQ5SRH9 613 aa20.42■□□□□ 0.86
CLN6-208ENST00000567060 DACT2Q5SW24 774 aa20.42■□□□□ 0.86
CLN6-208ENST00000567060 ANKRD45Q5TZF3 282 aa20.42■□□□□ 0.86
CLN6-208ENST00000567060 CENPQQ7L2Z9 268 aaPredicted RBP20.42■□□□□ 0.86
CLN6-208ENST00000567060 CCDC8Q9H0W5 538 aaPredicted RBP20.42■□□□□ 0.86
CLN6-208ENST00000567060 SALL1Q9NSC2 1324 aa20.42■□□□□ 0.86
CLN6-208ENST00000567060 NUCB1Q02818 461 aa20.41■□□□□ 0.86
CLN6-208ENST00000567060 ZNF646O15015 1829 aaPredicted RBP20.4■□□□□ 0.86
CLN6-208ENST00000567060 KIF4BQ2VIQ3 1234 aa20.4■□□□□ 0.86
CLN6-208ENST00000567060 TTC41PQ6P2S7 1318 aa20.4■□□□□ 0.86
CLN6-208ENST00000567060 CCDC136Q96JN2 1154 aa20.4■□□□□ 0.86
CLN6-208ENST00000567060 PPP4R2Q9NY27 417 aa20.4■□□□□ 0.86
CLN6-208ENST00000567060 RASGRF1Q13972 1273 aa20.39■□□□□ 0.85
CLN6-208ENST00000567060 TMED8Q6PL24 325 aaPredicted RBP20.39■□□□□ 0.85
CLN6-208ENST00000567060 CHD1LQ86WJ1 897 aa20.39■□□□□ 0.85
CLN6-208ENST00000567060 CDCA5Q96FF9 252 aa20.39■□□□□ 0.85
CLN6-208ENST00000567060 GMLQ99445 158 aa20.39■□□□□ 0.85
CLN6-208ENST00000567060 GGA3Q9NZ52 723 aa20.39■□□□□ 0.85
CLN6-208ENST00000567060 MAST3O60307 1309 aa20.38■□□□□ 0.85
CLN6-208ENST00000567060 SMARCA5O60264 1052 aaPredicted RBP20.38■□□□□ 0.85
CLN6-208ENST00000567060 ATP5JP18859 108 aa20.38■□□□□ 0.85
CLN6-208ENST00000567060 MFSD14BQ5SR56 506 aa20.38■□□□□ 0.85
CLN6-208ENST00000567060 SULF1Q8IWU6 871 aa20.38■□□□□ 0.85
CLN6-208ENST00000567060 SPATA5Q8NB90 893 aa20.38■□□□□ 0.85
CLN6-208ENST00000567060 ECHDC1Q9NTX5 307 aa20.38■□□□□ 0.85
CLN6-208ENST00000567060 TLR7Q9NYK1 1049 aaKnown RBP20.38■□□□□ 0.85
CLN6-208ENST00000567060 ERC2O15083 957 aa20.37■□□□□ 0.85
CLN6-208ENST00000567060 ZNF280AP59817 542 aaPredicted RBP20.37■□□□□ 0.85
CLN6-208ENST00000567060 SPTY2D1Q68D10 685 aaPredicted RBP20.37■□□□□ 0.85
CLN6-208ENST00000567060 OGFOD1Q8N543 542 aa20.37■□□□□ 0.85
CLN6-208ENST00000567060 FBXW7Q969H0 707 aa20.37■□□□□ 0.85
CLN6-208ENST00000567060 MRIQ9BWK5 157 aa20.37■□□□□ 0.85
CLN6-208ENST00000567060 HDAC9Q9UKV0 1011 aa20.37■□□□□ 0.85
CLN6-208ENST00000567060 AKAP11Q9UKA4 1901 aa20.36■□□□□ 0.85
CLN6-208ENST00000567060 MCAMP43121 646 aa20.36■□□□□ 0.85
CLN6-208ENST00000567060 SCARF1Q14162 830 aa20.36■□□□□ 0.85
CLN6-208ENST00000567060 CTU1Q7Z7A3 348 aaKnown RBP20.36■□□□□ 0.85
CLN6-208ENST00000567060 RASAL3Q86YV0 1011 aa20.36■□□□□ 0.85
CLN6-208ENST00000567060 HMG20BQ9P0W2 317 aa20.36■□□□□ 0.85
CLN6-208ENST00000567060 IQSEC3Q9UPP2 1182 aaPredicted RBP20.36■□□□□ 0.85
CLN6-208ENST00000567060 AOX1Q06278 1338 aa20.35■□□□□ 0.85
CLN6-208ENST00000567060 USP17L8P0C7I0 530 aa20.35■□□□□ 0.85
CLN6-208ENST00000567060 MX1P20591 662 aa20.35■□□□□ 0.85
CLN6-208ENST00000567060 HDLBPQ00341 1268 aaKnown RBP20.35■□□□□ 0.85
CLN6-208ENST00000567060 CHAF1AQ13111 956 aaPredicted RBP20.35■□□□□ 0.85
CLN6-208ENST00000567060 TTF1Q15361 905 aaPredicted RBP20.35■□□□□ 0.85
CLN6-208ENST00000567060 ANGEL2Q5VTE6 544 aaKnown RBP20.35■□□□□ 0.85
CLN6-208ENST00000567060 STAP2Q9UGK3 403 aa20.35■□□□□ 0.85
CLN6-208ENST00000567060 COL1A1P02452 1464 aaPredicted RBP20.35■□□□□ 0.85
CLN6-208ENST00000567060 SALL3Q9BXA9 1300 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms