RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 AKAP2Q9Y2D5 859 aa19.62■□□□□ 0.73
CMTM3-213ENST00000566756 TAF7LQ5H9L4 462 aa19.61■□□□□ 0.73
CMTM3-213ENST00000566756 KRT27Q7Z3Y8 459 aa19.61■□□□□ 0.73
CMTM3-213ENST00000566756 PDIA3P30101 505 aaKnown RBP19.61■□□□□ 0.73
CMTM3-213ENST00000566756 APOBRQ0VD83 1088 aa19.61■□□□□ 0.73
CMTM3-213ENST00000566756 CHAF1AQ13111 956 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-213ENST00000566756 SPC24Q8NBT2 197 aa19.61■□□□□ 0.73
CMTM3-213ENST00000566756 RIPOR2Q9Y4F9 1068 aa19.61■□□□□ 0.73
CMTM3-213ENST00000566756 LRP5O75197 1615 aa19.6■□□□□ 0.73
CMTM3-213ENST00000566756 LRRC2Q9BYS8 371 aa19.6■□□□□ 0.73
CMTM3-213ENST00000566756 RTCBQ9Y3I0 505 aaKnown RBP19.6■□□□□ 0.73
CMTM3-213ENST00000566756 RTL9Q8NET4 1388 aa19.6■□□□□ 0.73
CMTM3-213ENST00000566756 RBM6P78332 1123 aaKnown RBP19.59■□□□□ 0.73
CMTM3-213ENST00000566756 STX1AQ16623 288 aa19.59■□□□□ 0.73
CMTM3-213ENST00000566756 CCDC158Q5M9N0 1113 aa19.59■□□□□ 0.73
CMTM3-213ENST00000566756 TRIM5Q9C035 493 aa19.59■□□□□ 0.73
CMTM3-213ENST00000566756 WDR19Q8NEZ3 1342 aa19.59■□□□□ 0.73
CMTM3-213ENST00000566756 COL24A1Q17RW2 1714 aa19.59■□□□□ 0.73
CMTM3-213ENST00000566756 IQCB1Q15051 598 aa19.59■□□□□ 0.73
CMTM3-213ENST00000566756 LDHAL6AQ6ZMR3 332 aa19.59■□□□□ 0.73
CMTM3-213ENST00000566756 CCDC73Q6ZRK6 1079 aa19.59■□□□□ 0.73
CMTM3-213ENST00000566756 CCAR1Q8IX12 1150 aaKnown RBP19.59■□□□□ 0.73
CMTM3-213ENST00000566756 CCDC85AQ96PX6 553 aaPredicted RBP19.59■□□□□ 0.73
CMTM3-213ENST00000566756 GNPATO15228 680 aa19.58■□□□□ 0.73
CMTM3-213ENST00000566756 PTGS1P23219 599 aa19.58■□□□□ 0.73
CMTM3-213ENST00000566756 FAM160A1Q05DH4 1040 aa19.58■□□□□ 0.73
CMTM3-213ENST00000566756 C17orf53Q8N3J3 647 aaPredicted RBP19.58■□□□□ 0.73
CMTM3-213ENST00000566756 ENGASEQ8NFI3 743 aa19.58■□□□□ 0.73
CMTM3-213ENST00000566756 DNAJC25Q9H1X3 360 aa19.58■□□□□ 0.73
CMTM3-213ENST00000566756 C4AP0C0L4 1744 aa19.58■□□□□ 0.72
CMTM3-213ENST00000566756 CARMIL3Q8ND23 1372 aa19.57■□□□□ 0.72
CMTM3-213ENST00000566756 DHX16O60231 1041 aaKnown RBP19.57■□□□□ 0.72
CMTM3-213ENST00000566756 MRFAP1L1Q96HT8 127 aa19.57■□□□□ 0.72
CMTM3-213ENST00000566756 BCL2L12Q9HB09 334 aa19.57■□□□□ 0.72
CMTM3-213ENST00000566756 M0R2C6 588 aa19.57■□□□□ 0.72
CMTM3-213ENST00000566756 NEMFO60524 1076 aa19.57■□□□□ 0.72
CMTM3-213ENST00000566756 SNW1Q13573 536 aaKnown RBP19.57■□□□□ 0.72
CMTM3-213ENST00000566756 CCDC186Q7Z3E2 898 aa19.57■□□□□ 0.72
CMTM3-213ENST00000566756 USP28Q96RU2 1077 aa19.57■□□□□ 0.72
CMTM3-213ENST00000566756 CASZ1Q86V15 1759 aa19.56■□□□□ 0.72
CMTM3-213ENST00000566756 RIC1Q4ADV7 1423 aa19.56■□□□□ 0.72
CMTM3-213ENST00000566756 A0A1W2PQ27 194 aa19.56■□□□□ 0.72
CMTM3-213ENST00000566756 A0A1W2PQ64 194 aa19.56■□□□□ 0.72
CMTM3-213ENST00000566756 A0A1W2PQD8 194 aa19.56■□□□□ 0.72
CMTM3-213ENST00000566756 GOLGA6L19H0YKK7 550 aa19.56■□□□□ 0.72
CMTM3-213ENST00000566756 KINO60870 393 aaKnown RBP19.56■□□□□ 0.72
CMTM3-213ENST00000566756 HMGB2P26583 209 aaKnown RBP19.56■□□□□ 0.72
CMTM3-213ENST00000566756 IMMTQ16891 758 aaKnown RBP19.56■□□□□ 0.72
CMTM3-213ENST00000566756 SLC27A3Q5K4L6 730 aa19.56■□□□□ 0.72
CMTM3-213ENST00000566756 ANO10Q9NW15 660 aa19.56■□□□□ 0.72
CMTM3-213ENST00000566756 RTEL1Q9NZ71 1219 aa19.56■□□□□ 0.72
CMTM3-213ENST00000566756 CCDC152Q4G0S7 254 aa19.55■□□□□ 0.72
CMTM3-213ENST00000566756 OSBP2Q969R2 916 aa19.55■□□□□ 0.72
CMTM3-213ENST00000566756 UBR3Q6ZT12 1888 aa19.55■□□□□ 0.72
CMTM3-213ENST00000566756 ZPR1O75312 459 aa19.55■□□□□ 0.72
CMTM3-213ENST00000566756 CCT2P78371 535 aaKnown RBP19.55■□□□□ 0.72
CMTM3-213ENST00000566756 SLC10A5Q5PT55 438 aa19.55■□□□□ 0.72
CMTM3-213ENST00000566756 TTC39AQ5SRH9 613 aa19.55■□□□□ 0.72
CMTM3-213ENST00000566756 ZSCAN25Q6NSZ9 544 aa19.55■□□□□ 0.72
CMTM3-213ENST00000566756 DRC7Q8IY82 874 aa19.55■□□□□ 0.72
CMTM3-213ENST00000566756 APPBP2Q92624 585 aa19.55■□□□□ 0.72
CMTM3-213ENST00000566756 CNNM1Q9NRU3 951 aa19.55■□□□□ 0.72
CMTM3-213ENST00000566756 ADRA2BP18089 450 aa19.54■□□□□ 0.72
CMTM3-213ENST00000566756 ADALQ6DHV7 355 aa19.54■□□□□ 0.72
CMTM3-213ENST00000566756 VGLL2Q8N8G2 317 aa19.54■□□□□ 0.72
CMTM3-213ENST00000566756 ARHGEF1Q92888 912 aaKnown RBP19.54■□□□□ 0.72
CMTM3-213ENST00000566756 GOLPH3LQ9H4A5 285 aa19.54■□□□□ 0.72
CMTM3-213ENST00000566756 CLIP2Q9UDT6 1046 aa19.54■□□□□ 0.72
CMTM3-213ENST00000566756 MROH5Q6ZUA9 1318 aa19.54■□□□□ 0.72
CMTM3-213ENST00000566756 FAM177BA6PVY3 158 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 METTL24Q5JXM2 366 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 TBC1D9BQ66K14 1250 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 ILDR1Q86SU0 546 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-213ENST00000566756 XAGE2Q96GT9 111 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 ZNF512BQ96KM6 892 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-213ENST00000566756 NYXQ9GZU5 481 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 LRRC4BQ9NT99 713 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 YEATS4O95619 227 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 FDPSP14324 419 aaKnown RBP19.53■□□□□ 0.72
CMTM3-213ENST00000566756 SLFNL1Q499Z3 407 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 BRAPQ7Z569 592 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 MB21D2Q8IYB1 491 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-213ENST00000566756 NCOA5Q9HCD5 579 aaKnown RBP19.53■□□□□ 0.72
CMTM3-213ENST00000566756 MYH7P12883 1935 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 ARAP2Q8WZ64 1704 aa19.53■□□□□ 0.72
CMTM3-213ENST00000566756 FOXP2O15409 715 aa19.52■□□□□ 0.72
CMTM3-213ENST00000566756 CTIFO43310 598 aaKnown RBP19.52■□□□□ 0.72
CMTM3-213ENST00000566756 PDE8BO95263 885 aa19.52■□□□□ 0.72
CMTM3-213ENST00000566756 SF3B3Q15393 1217 aaKnown RBP19.52■□□□□ 0.72
CMTM3-213ENST00000566756 TRAPPC3LQ5T215 181 aa19.52■□□□□ 0.72
CMTM3-213ENST00000566756 GORABQ5T7V8 394 aa19.52■□□□□ 0.72
CMTM3-213ENST00000566756 KCNG4Q8TDN1 519 aa19.52■□□□□ 0.72
CMTM3-213ENST00000566756 MRPS27Q92552 414 aaKnown RBP19.52■□□□□ 0.72
CMTM3-213ENST00000566756 NAT10Q9H0A0 1025 aaKnown RBP19.52■□□□□ 0.72
CMTM3-213ENST00000566756 POLR3EQ9NVU0 708 aa19.52■□□□□ 0.72
CMTM3-213ENST00000566756 ATP2B3Q16720 1220 aa19.52■□□□□ 0.71
CMTM3-213ENST00000566756 FMR1NBQ8N0W7 255 aaPredicted RBP19.52■□□□□ 0.71
CMTM3-213ENST00000566756 FSIP1Q8NA03 581 aa19.52■□□□□ 0.71
CMTM3-213ENST00000566756 NCOA7Q8NI08 942 aa19.52■□□□□ 0.71
CMTM3-213ENST00000566756 SETDB2Q96T68 719 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms