RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 SSC5DA1L4H1 1573 aa34.63■■■■□ 3.13
UBFD1-206ENST00000566669 CRKP46108 304 aa34.63■■■■□ 3.13
UBFD1-206ENST00000566669 ARAP2Q8WZ64 1704 aa34.62■■■■□ 3.13
UBFD1-206ENST00000566669 NBPF12Q5TAG4 269 aaPredicted RBP34.62■■■■□ 3.13
UBFD1-206ENST00000566669 OTUD7BQ6GQQ9 843 aa34.62■■■■□ 3.13
UBFD1-206ENST00000566669 CCER2I3L3R5 266 aa34.61■■■■□ 3.13
UBFD1-206ENST00000566669 TEKT1Q969V4 418 aa34.61■■■■□ 3.13
UBFD1-206ENST00000566669 WNK4Q96J92 1243 aa34.61■■■■□ 3.13
UBFD1-206ENST00000566669 TDRD3Q9H7E2 651 aaKnown RBP34.61■■■■□ 3.13
UBFD1-206ENST00000566669 EYA2O00167 538 aa34.6■■■■□ 3.13
UBFD1-206ENST00000566669 API5Q9BZZ5 524 aaKnown RBP34.6■■■■□ 3.13
UBFD1-206ENST00000566669 USP2O75604 605 aaPredicted RBP34.59■■■■□ 3.13
UBFD1-206ENST00000566669 UBTFL1P0CB47 393 aaPredicted RBP34.59■■■■□ 3.13
UBFD1-206ENST00000566669 FKTNO75072 461 aa34.58■■■■□ 3.13
UBFD1-206ENST00000566669 SLC5A1P13866 664 aa34.58■■■■□ 3.13
UBFD1-206ENST00000566669 FGFR2P21802 821 aa34.58■■■■□ 3.13
UBFD1-206ENST00000566669 CHAF1AQ13111 956 aaPredicted RBP34.58■■■■□ 3.13
UBFD1-206ENST00000566669 IFNL1Q8IU54 200 aa34.58■■■■□ 3.13
UBFD1-206ENST00000566669 LPIN2Q92539 896 aa34.58■■■■□ 3.13
UBFD1-206ENST00000566669 HOOK2Q96ED9 719 aa34.58■■■■□ 3.13
UBFD1-206ENST00000566669 CDCA7LQ96GN5 454 aa34.58■■■■□ 3.13
UBFD1-206ENST00000566669 TMOD2Q9NZR1 351 aa34.57■■■■□ 3.12
UBFD1-206ENST00000566669 BCAMP50895 628 aa34.56■■■■□ 3.12
UBFD1-206ENST00000566669 FKBP1CQ5VVH2 108 aa34.56■■■■□ 3.12
UBFD1-206ENST00000566669 KLHDC4Q8TBB5 520 aa34.56■■■■□ 3.12
UBFD1-206ENST00000566669 CLMNQ96JQ2 1002 aa34.56■■■■□ 3.12
UBFD1-206ENST00000566669 ZDHHC15Q96MV8 337 aa34.56■■■■□ 3.12
UBFD1-206ENST00000566669 FZD1Q9UP38 647 aa34.56■■■■□ 3.12
UBFD1-206ENST00000566669 AOX1Q06278 1338 aa34.55■■■■□ 3.12
UBFD1-206ENST00000566669 CIAO1O76071 339 aa34.55■■■■□ 3.12
UBFD1-206ENST00000566669 RFX5P48382 616 aaPredicted RBP34.55■■■■□ 3.12
UBFD1-206ENST00000566669 WDR66Q8TBY9 1149 aa34.55■■■■□ 3.12
UBFD1-206ENST00000566669 IQSEC3Q9UPP2 1182 aaPredicted RBP34.55■■■■□ 3.12
UBFD1-206ENST00000566669 TEPSINQ96N21 525 aa34.53■■■■□ 3.12
UBFD1-206ENST00000566669 TCP10L2B9ZVM9 353 aa34.52■■■■□ 3.12
UBFD1-206ENST00000566669 FBXO46Q6PJ61 603 aaPredicted RBP34.52■■■■□ 3.12
UBFD1-206ENST00000566669 HHIPL2Q6UWX4 724 aa34.52■■■■□ 3.12
UBFD1-206ENST00000566669 FAM83AQ86UY5 434 aa34.52■■■■□ 3.12
UBFD1-206ENST00000566669 GNL3LQ9NVN8 582 aaKnown RBP34.52■■■■□ 3.12
UBFD1-206ENST00000566669 NOB1Q9ULX3 412 aaKnown RBP34.52■■■■□ 3.12
UBFD1-206ENST00000566669 HPS5Q9UPZ3 1129 aa34.52■■■■□ 3.12
UBFD1-206ENST00000566669 ARHGAP45Q92619 1136 aa34.51■■■■□ 3.12
UBFD1-206ENST00000566669 LAMB1P07942 1786 aa34.51■■■■□ 3.11
UBFD1-206ENST00000566669 TESPA1A2RU30 521 aaPredicted RBP34.5■■■■□ 3.11
UBFD1-206ENST00000566669 CEP126Q9P2H0 1117 aa34.5■■■■□ 3.11
UBFD1-206ENST00000566669 CSADQ9Y600 493 aa34.5■■■■□ 3.11
UBFD1-206ENST00000566669 ZBTB22O15209 634 aa34.48■■■■□ 3.11
UBFD1-206ENST00000566669 MAP3K9P80192 1104 aa34.48■■■■□ 3.11
UBFD1-206ENST00000566669 ATG9AQ7Z3C6 839 aa34.48■■■■□ 3.11
UBFD1-206ENST00000566669 TMEM39BQ9GZU3 492 aa34.48■■■■□ 3.11
UBFD1-206ENST00000566669 IL15P40933 162 aaPredicted RBP34.47■■■■□ 3.11
UBFD1-206ENST00000566669 OPTNQ96CV9 577 aa34.47■■■■□ 3.11
UBFD1-206ENST00000566669 IGF2BP3O00425 579 aaKnown RBP eCLIP34.46■■■■□ 3.11
UBFD1-206ENST00000566669 SEMA3EO15041 775 aa34.46■■■■□ 3.11
UBFD1-206ENST00000566669 GRIK5Q16478 980 aa34.46■■■■□ 3.11
UBFD1-206ENST00000566669 DDX55Q8NHQ9 600 aaKnown RBP eCLIP34.46■■■■□ 3.11
UBFD1-206ENST00000566669 ZBTB4Q9P1Z0 1013 aaPredicted RBP34.46■■■■□ 3.11
UBFD1-206ENST00000566669 GTF2A2P52657 109 aa34.45■■■■□ 3.11
UBFD1-206ENST00000566669 ATP2B3Q16720 1220 aa34.45■■■■□ 3.11
UBFD1-206ENST00000566669 APOBEC3HQ6NTF7 200 aaKnown RBP34.45■■■■□ 3.11
UBFD1-206ENST00000566669 ERO1AQ96HE7 468 aa34.45■■■■□ 3.11
UBFD1-206ENST00000566669 ELP3Q9H9T3 547 aa34.45■■■■□ 3.11
UBFD1-206ENST00000566669 RPAP1Q9BWH6 1393 aaPredicted RBP34.45■■■■□ 3.11
UBFD1-206ENST00000566669 PPP1R3FQ6ZSY5 799 aaPredicted RBP34.44■■■■□ 3.1
UBFD1-206ENST00000566669 GNAI3P08754 354 aa34.43■■■■□ 3.1
UBFD1-206ENST00000566669 GJA5P36382 358 aa34.43■■■■□ 3.1
UBFD1-206ENST00000566669 RARSP54136 660 aaKnown RBP34.43■■■■□ 3.1
UBFD1-206ENST00000566669 SOX10P56693 466 aa34.43■■■■□ 3.1
UBFD1-206ENST00000566669 DCAF15Q66K64 600 aa34.43■■■■□ 3.1
UBFD1-206ENST00000566669 R3HDMLQ9H3Y0 253 aa34.43■■■■□ 3.1
UBFD1-206ENST00000566669 WDHD1O75717 1129 aaPredicted RBP34.42■■■■□ 3.1
UBFD1-206ENST00000566669 VGLL4Q14135 290 aa34.42■■■■□ 3.1
UBFD1-206ENST00000566669 SIL1Q9H173 461 aa34.42■■■■□ 3.1
UBFD1-206ENST00000566669 COPRSQ9NQ92 184 aa34.42■■■■□ 3.1
UBFD1-206ENST00000566669 DENND2AQ9ULE3 1009 aa34.42■■■■□ 3.1
UBFD1-206ENST00000566669 LRRFIP2Q9Y608 721 aaKnown RBP34.42■■■■□ 3.1
UBFD1-206ENST00000566669 SALL1Q9NSC2 1324 aa34.41■■■■□ 3.1
UBFD1-206ENST00000566669 IPO8O15397 1037 aaKnown RBP34.41■■■■□ 3.1
UBFD1-206ENST00000566669 INTS3Q68E01 1043 aaKnown RBP34.41■■■■□ 3.1
UBFD1-206ENST00000566669 ARHGEF6Q15052 776 aa34.4■■■■□ 3.1
UBFD1-206ENST00000566669 ZGPATQ8N5A5 531 aaKnown RBP34.4■■■■□ 3.1
UBFD1-206ENST00000566669 MS4A4AQ96JQ5 239 aa34.4■■■■□ 3.1
UBFD1-206ENST00000566669 CRHR2Q13324 411 aa34.39■■■■□ 3.1
UBFD1-206ENST00000566669 SPDYE5A6NIY4 337 aa34.38■■■■□ 3.09
UBFD1-206ENST00000566669 LDHBP07195 334 aaKnown RBP34.38■■■■□ 3.09
UBFD1-206ENST00000566669 CDAN1Q8IWY9 1227 aa34.38■■■■□ 3.09
UBFD1-206ENST00000566669 ZCCHC17Q9NP64 241 aaKnown RBP34.38■■■■□ 3.09
UBFD1-206ENST00000566669 CACNB3P54284 484 aa34.37■■■■□ 3.09
UBFD1-206ENST00000566669 ERO1BQ86YB8 467 aa34.37■■■■□ 3.09
UBFD1-206ENST00000566669 PTPN18Q99952 460 aa34.37■■■■□ 3.09
UBFD1-206ENST00000566669 TRIM17Q9Y577 477 aa34.37■■■■□ 3.09
UBFD1-206ENST00000566669 OTOFQ9HC10 1997 aa34.36■■■■□ 3.09
UBFD1-206ENST00000566669 FAM151AQ8WW52 585 aa34.36■■■■□ 3.09
UBFD1-206ENST00000566669 WRNIP1Q96S55 665 aa34.36■■■■□ 3.09
UBFD1-206ENST00000566669 AKAP2Q9Y2D5 859 aa34.36■■■■□ 3.09
UBFD1-206ENST00000566669 CCL15-CCL14A0A0B4J2E2 113 aa34.35■■■■□ 3.09
UBFD1-206ENST00000566669 SP3Q02447 781 aa34.35■■■■□ 3.09
UBFD1-206ENST00000566669 CCL15Q16663 113 aa34.35■■■■□ 3.09
UBFD1-206ENST00000566669 OTOP1Q7RTM1 612 aa34.35■■■■□ 3.09
UBFD1-206ENST00000566669 MEIS3Q99687 375 aa34.35■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms