RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 CLRN2A0PK11 232 aa15.86■□□□□ 0.13
CNEP1R1-208ENST00000566482 RASSF10A6NK89 507 aa15.86■□□□□ 0.13
CNEP1R1-208ENST00000566482 MYO1BO43795 1136 aa15.86■□□□□ 0.13
CNEP1R1-208ENST00000566482 PRDX5P30044 214 aa15.86■□□□□ 0.13
CNEP1R1-208ENST00000566482 HDLBPQ00341 1268 aaKnown RBP15.86■□□□□ 0.13
CNEP1R1-208ENST00000566482 HSP90AB4PQ58FF6 505 aa15.86■□□□□ 0.13
CNEP1R1-208ENST00000566482 TEKT1Q969V4 418 aa15.86■□□□□ 0.13
CNEP1R1-208ENST00000566482 DBNDD2Q9BQY9 259 aa15.86■□□□□ 0.13
CNEP1R1-208ENST00000566482 PDS5AQ29RF7 1337 aaKnown RBP15.86■□□□□ 0.13
CNEP1R1-208ENST00000566482 SALL1Q9NSC2 1324 aa15.86■□□□□ 0.13
CNEP1R1-208ENST00000566482 LDHBP07195 334 aaKnown RBP15.85■□□□□ 0.13
CNEP1R1-208ENST00000566482 ARID4AP29374 1257 aaPredicted RBP15.85■□□□□ 0.13
CNEP1R1-208ENST00000566482 DEFB115Q30KQ5 88 aa15.85■□□□□ 0.13
CNEP1R1-208ENST00000566482 PRAMEF18Q5VWM3 479 aa15.85■□□□□ 0.13
CNEP1R1-208ENST00000566482 APBB1O00213 710 aa15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 UQCRFS1P1P0C7P4 283 aa15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 VEGFBP49765 207 aa15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 SPDYE2Q495Y8 402 aa15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 PI16Q6UXB8 463 aa15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 SAPCD2Q86UD0 394 aa15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 ZGPATQ8N5A5 531 aaKnown RBP15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 JMYQ8N9B5 988 aa15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 EAF2Q96CJ1 260 aaPredicted RBP15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 MRIQ9BWK5 157 aa15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 CCDC8Q9H0W5 538 aaPredicted RBP15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 TDRD3Q9H7E2 651 aaKnown RBP15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 VEZTQ9HBM0 779 aa15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 GBA2Q9HCG7 927 aaPredicted RBP15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 TLR7Q9NYK1 1049 aaKnown RBP15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 HMG20BQ9P0W2 317 aa15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 ZNF70Q9UC06 446 aaPredicted RBP15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 DBNLQ9UJU6 430 aaKnown RBP15.84■□□□□ 0.13
CNEP1R1-208ENST00000566482 MCAMP43121 646 aa15.83■□□□□ 0.12
CNEP1R1-208ENST00000566482 TTC39AQ5SRH9 613 aa15.83■□□□□ 0.12
CNEP1R1-208ENST00000566482 C2orf69Q8N8R5 385 aa15.83■□□□□ 0.12
CNEP1R1-208ENST00000566482 SPATA5Q8NB90 893 aa15.83■□□□□ 0.12
CNEP1R1-208ENST00000566482 RHPN1Q8TCX5 695 aa15.83■□□□□ 0.12
CNEP1R1-208ENST00000566482 KIF1BPQ96EK5 621 aa15.83■□□□□ 0.12
CNEP1R1-208ENST00000566482 ZDHHC15Q96MV8 337 aa15.83■□□□□ 0.12
CNEP1R1-208ENST00000566482 CRBNQ96SW2 442 aa15.83■□□□□ 0.12
CNEP1R1-208ENST00000566482 DEFB129Q9H1M3 183 aa15.83■□□□□ 0.12
CNEP1R1-208ENST00000566482 IL1RAPL2Q9NP60 686 aa15.83■□□□□ 0.12
CNEP1R1-208ENST00000566482 RAB11FIP3O75154 756 aa15.82■□□□□ 0.12
CNEP1R1-208ENST00000566482 HUNKP57058 714 aa15.82■□□□□ 0.12
CNEP1R1-208ENST00000566482 DIXDC1Q155Q3 683 aa15.82■□□□□ 0.12
CNEP1R1-208ENST00000566482 CCDC158Q5M9N0 1113 aa15.82■□□□□ 0.12
CNEP1R1-208ENST00000566482 HHIPL2Q6UWX4 724 aa15.82■□□□□ 0.12
CNEP1R1-208ENST00000566482 PAXIP1Q6ZW49 1069 aaPredicted RBP15.82■□□□□ 0.12
CNEP1R1-208ENST00000566482 AACSQ86V21 672 aa15.82■□□□□ 0.12
CNEP1R1-208ENST00000566482 ABCF2Q9UG63 623 aa15.82■□□□□ 0.12
CNEP1R1-208ENST00000566482 SPTY2D1Q68D10 685 aaPredicted RBP15.81■□□□□ 0.12
CNEP1R1-208ENST00000566482 CYP4F22Q6NT55 531 aa15.81■□□□□ 0.12
CNEP1R1-208ENST00000566482 APOBEC3HQ6NTF7 200 aaKnown RBP15.81■□□□□ 0.12
CNEP1R1-208ENST00000566482 HHIPL1Q96JK4 782 aa15.81■□□□□ 0.12
CNEP1R1-208ENST00000566482 CAPNS2Q96L46 248 aa15.81■□□□□ 0.12
CNEP1R1-208ENST00000566482 PAPPA2Q9BXP8 1791 aa15.81■□□□□ 0.12
CNEP1R1-208ENST00000566482 DAGLAQ9Y4D2 1042 aa15.81■□□□□ 0.12
CNEP1R1-208ENST00000566482 PPP2R3BQ9Y5P8 575 aa15.81■□□□□ 0.12
CNEP1R1-208ENST00000566482 WDR33Q9C0J8 1336 aaKnown RBP15.8■□□□□ 0.12
CNEP1R1-208ENST00000566482 TCP10L2B9ZVM9 353 aa15.8■□□□□ 0.12
CNEP1R1-208ENST00000566482 NF2P35240 595 aa15.8■□□□□ 0.12
CNEP1R1-208ENST00000566482 RASA3Q14644 834 aa15.8■□□□□ 0.12
CNEP1R1-208ENST00000566482 DZIP1Q86YF9 867 aaKnown RBP15.8■□□□□ 0.12
CNEP1R1-208ENST00000566482 SNRKQ9NRH2 765 aa15.8■□□□□ 0.12
CNEP1R1-208ENST00000566482 PCDHB15Q9Y5E8 787 aa15.8■□□□□ 0.12
CNEP1R1-208ENST00000566482 ECE1P42892 770 aa15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 CACNB3P54284 484 aa15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 FKBP1BP68106 108 aa15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 GRM1Q13255 1194 aa15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 TNFAIP1Q13829 316 aa15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 TBC1D9Q6ZT07 1266 aa15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 MOB2Q70IA6 237 aa15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 ERICH6Q7L0X2 663 aa15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 CLASRPQ8N2M8 674 aaKnown RBP15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 ZNF512BQ96KM6 892 aaPredicted RBP15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 SSC5DA1L4H1 1573 aa15.79■□□□□ 0.12
CNEP1R1-208ENST00000566482 AKAP11Q9UKA4 1901 aa15.78■□□□□ 0.12
CNEP1R1-208ENST00000566482 ZAP70P43403 619 aa15.78■□□□□ 0.12
CNEP1R1-208ENST00000566482 MECOMQ03112 1051 aa15.78■□□□□ 0.12
CNEP1R1-208ENST00000566482 TTLL12Q14166 644 aaPredicted RBP15.78■□□□□ 0.12
CNEP1R1-208ENST00000566482 BCL11AQ9H165 835 aa15.78■□□□□ 0.12
CNEP1R1-208ENST00000566482 TMOD2Q9NZR1 351 aa15.78■□□□□ 0.12
CNEP1R1-208ENST00000566482 GAKO14976 1311 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 THSD7BQ9C0I4 1608 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 MYH2Q9UKX2 1941 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 UBE2Q2LH0YL09 131 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 TNNI2P48788 182 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 PRKG1Q13976 671 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 NBPF12Q5TAG4 269 aaPredicted RBP15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 RGMBQ6NW40 437 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 CDC42EP5Q6NZY7 148 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 SLF2Q8IX21 1173 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 ZNF384Q8TF68 577 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 RAI14Q9P0K7 980 aa15.77■□□□□ 0.12
CNEP1R1-208ENST00000566482 MROH7-TTC4A0A0A0MT08 1334 aa15.76■□□□□ 0.11
CNEP1R1-208ENST00000566482 AOC2O75106 756 aa15.76■□□□□ 0.11
CNEP1R1-208ENST00000566482 CYP2E1P05181 493 aaPredicted RBP15.76■□□□□ 0.11
CNEP1R1-208ENST00000566482 IFIT2P09913 472 aaKnown RBP15.76■□□□□ 0.11
CNEP1R1-208ENST00000566482 SUPT20HL1Q3ZLR7 823 aa15.76■□□□□ 0.11
CNEP1R1-208ENST00000566482 FKBP1CQ5VVH2 108 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms