RNA–Protein interactions for RNA: ENST00000566452.1

BBS2-215, Transcript of Bardet-Biedl syndrome 2, human

TSL 2

Gene BBS2, Length 299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS2-215	ENST00000566452	ANAPC15	P60006	121 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	CTBS	Q01459	385 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	UBAP2L	Q14157	1087 aa	Known RBP	5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	LBR	Q14739	615 aa	Known RBP	5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	KIAA0319	Q5VV43	1072 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	PRPF40B	Q6NWY9	871 aa	Known RBP	5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	C3orf58	Q8NDZ4	430 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	MICAL1	Q8TDZ2	1067 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	TMEM74	Q96NL1	305 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	NACC1	Q96RE7	527 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	TMX1	Q9H3N1	280 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	METTL14	Q9HCE5	456 aa	Known RBP	5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	C11orf16	Q9NQ32	467 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	EFR3B	Q9Y2G0	817 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	USP20	Q9Y2K6	914 aa		5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	NOP58	Q9Y2X3	529 aa	Known RBP	5.22	□□□□□ -1.57
BBS2-215	ENST00000566452	EIF4G3	O43432	1585 aa	Known RBP	5.21	□□□□□ -1.57
BBS2-215	ENST00000566452	MARCH6	O60337	910 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	XYLB	O75191	536 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	EDN3	P14138	238 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	ATP4A	P20648	1035 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	GBP2	P32456	591 aa	Predicted RBP	5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	RAB33A	Q14088	237 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	ANKS3	Q6ZW76	656 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	LRP10	Q7Z4F1	713 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	NLRP13	Q86W25	1043 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	ABHD17A	Q96GS6	310 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	NT5C1A	Q9BXI3	368 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	EHD4	Q9H223	541 aa		5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	R3HCC1	Q9Y3T6	440 aa	Known RBP	5.21	□□□□□ -1.58
BBS2-215	ENST00000566452	EGFR	P00533	1210 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	CES1	P23141	567 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	JAG1	P78504	1218 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	TYRO3	Q06418	890 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	TTC39B	Q5VTQ0	682 aa	Predicted RBP	5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	NOL8	Q76FK4	1167 aa	Known RBP	5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	SV2B	Q7L1I2	683 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	C1orf127	Q8N9H9	656 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	GLIS3	Q8NEA6	775 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	ZNF296	Q8WUU4	475 aa	Predicted RBP	5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	RHOV	Q96L33	236 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	DEPDC7	Q96QD5	511 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	KCNQ5	Q9NR82	932 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	GINM1	Q9NU53	330 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	SNTG2	Q9NY99	539 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	RNF112	Q9ULX5	631 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	PRKAB1	Q9Y478	270 aa		5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.2	□□□□□ -1.58
BBS2-215	ENST00000566452	MINDY4B	A8MYZ0	360 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	KLF4	O43474	513 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	TAL1	P17542	331 aa	Predicted RBP	5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	ADH6	P28332	368 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	ETFB	P38117	255 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	PHKA2	P46019	1235 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	FCGRT	P55899	365 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	RASA3	Q14644	834 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	PLEKHG4	Q58EX7	1191 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	TNNI3K	Q59H18	835 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	ARSJ	Q5FYB0	599 aa	Predicted RBP	5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	LRRC69	Q6ZNQ3	347 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	CPLX3	Q8WVH0	158 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	EAF1	Q96JC9	268 aa	Predicted RBP	5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	POLR3GL	Q9BT43	218 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	SLK	Q9H2G2	1235 aa	Predicted RBP	5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	ZFYVE1	Q9HBF4	777 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	CNTN3	Q9P232	1028 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	PRKAG3	Q9UGI9	489 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	COL4A3BP	Q9Y5P4	624 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	MRVI1	Q9Y6F6	885 aa		5.19	□□□□□ -1.58
BBS2-215	ENST00000566452	KIF13A	Q9H1H9	1805 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452		A0A1B0GTH6	734 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452		A0A1W2PP55	124 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	DNAJC6	O75061	913 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	TAF7L	Q5H9L4	462 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	PCNX4	Q63HM2	1172 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	DTHD1	Q6ZMT9	781 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	FILIP1	Q7Z7B0	1213 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	PGBD3	Q8N328	593 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	PHC3	Q8NDX5	983 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	HNRNPLL	Q8WVV9	542 aa	Known RBP	5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	RNPC3	Q96LT9	517 aa	Known RBP	5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	CEP63	Q96MT8	703 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	ZIC5	Q96T25	663 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	TRIM56	Q9BRZ2	755 aa	Known RBP	5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	SRRT	Q9BXP5	876 aa	Known RBP	5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	CEP44	Q9C0F1	390 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	PCMTD2	Q9NV79	361 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452	GJA3	Q9Y6H8	435 aa		5.18	□□□□□ -1.58
BBS2-215	ENST00000566452		F6X3S4	739 aa		5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	PPP1R12A	O14974	1030 aa	Predicted RBP	5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	BNIP3L	O60238	219 aa		5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	CDC45	O75419	566 aa		5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	GRN	P28799	593 aa	Known RBP	5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	LIG3	P49916	1009 aa		5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	APOBR	Q0VD83	1088 aa		5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	EFHC2	Q5JST6	749 aa		5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	SNAP47	Q5SQN1	464 aa		5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	KRTAP5-3	Q6L8H2	238 aa		5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	FBXL19	Q6PCT2	694 aa		5.17	□□□□□ -1.58
BBS2-215	ENST00000566452	ANAPC16	Q96DE5	110 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms