RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 CCDC129Q6ZRS4 1044 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 RPGRQ92834 1020 aaKnown RBP10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 NEK1Q96PY6 1258 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 AGXT2Q9BYV1 514 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 MAST2Q6P0Q8 1798 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 COL1A1P02452 1464 aaPredicted RBP10.55□□□□□ -0.72
LSM3P5-201ENST00000566307 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
LSM3P5-201ENST00000566307 CHGBP05060 677 aa10.55□□□□□ -0.72
LSM3P5-201ENST00000566307 ATP2B4P23634 1241 aa10.55□□□□□ -0.72
LSM3P5-201ENST00000566307 HIBADHP31937 336 aaKnown RBP10.55□□□□□ -0.72
LSM3P5-201ENST00000566307 PUS7LQ9H0K6 701 aaKnown RBP10.55□□□□□ -0.72
LSM3P5-201ENST00000566307 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
LSM3P5-201ENST00000566307 LAMA4Q16363 1823 aa10.55□□□□□ -0.72
LSM3P5-201ENST00000566307 CACNA1SQ13698 1873 aa10.55□□□□□ -0.72
LSM3P5-201ENST00000566307 ZNF532Q9HCE3 1301 aa10.55□□□□□ -0.72
LSM3P5-201ENST00000566307 MYH13Q9UKX3 1938 aa10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 SNAP23O00161 211 aa10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 IDH1O75874 414 aaKnown RBP10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 PTMSP20962 102 aa10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 PDE6BP35913 854 aa10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 GYG1P46976 350 aa10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 SLC15A2Q16348 729 aa10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 IMMTQ16891 758 aaKnown RBP10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 SP8Q8IXZ3 490 aa10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 ZGPATQ8N5A5 531 aaKnown RBP10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 CHMP4CQ96CF2 233 aa10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 STRBPQ96SI9 672 aaKnown RBP10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 WWC3Q9ULE0 1092 aa10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.54□□□□□ -0.72
LSM3P5-201ENST00000566307 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 FGAP02671 866 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 POTEIP0CG38 1075 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 SRGNP10124 158 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 NPR1P16066 1061 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 NT5C2P49902 561 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 EVCP57679 992 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 EXOSC10Q01780 885 aaKnown RBP10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 SPTY2D1Q68D10 685 aaPredicted RBP10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 DHX32Q7L7V1 743 aaKnown RBP10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 VPS37DQ86XT2 251 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 TDRD7Q8NHU6 1098 aaKnown RBP10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 AIDAQ96BJ3 306 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 MTA3Q9BTC8 594 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 STK32BQ9NY57 414 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 PARP3Q9Y6F1 533 aa10.53□□□□□ -0.72
LSM3P5-201ENST00000566307 PATL2C9JE40 543 aaKnown RBP10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 E7EWF7 191 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 GTPBP6O43824 516 aaPredicted RBP10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 ALDH1B1P30837 517 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 BAG6P46379 1132 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 TOB2Q14106 344 aaPredicted RBP10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 SLFNL1Q499Z3 407 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 GIMAP6Q6P9H5 292 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 STOX1Q6ZVD7 989 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 ZNF804AQ7Z570 1209 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 CCDC125Q86Z20 511 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 MAGEB6Q8N7X4 407 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 WDR66Q8TBY9 1149 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 GBP4Q96PP9 640 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 LRP2BPQ9P2M1 347 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 ATP6V0A2Q9Y487 856 aa10.52□□□□□ -0.73
LSM3P5-201ENST00000566307 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 MMP10P09238 476 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 IL1R1P14778 569 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 MCM4P33991 863 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 STYK1Q6J9G0 422 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 CERS3Q8IU89 383 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 SLC16A10Q8TF71 515 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 TNPO1Q92973 898 aaKnown RBP10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 MASTLQ96GX5 879 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 NACAP1Q9BZK3 213 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 ANKIB1Q9P2G1 1089 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 GGA1Q9UJY5 639 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 TAF6LQ9Y6J9 622 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 CCDC88AQ3V6T2 1871 aa10.51□□□□□ -0.73
LSM3P5-201ENST00000566307 COL11A2P13942 1736 aaPredicted RBP10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 STK25O00506 426 aa10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 ZNF213O14771 459 aa10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 PPEF1O14829 653 aaPredicted RBP10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 MBD4O95243 580 aa10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 BRD1O95696 1058 aa10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 PCP11498 1178 aaKnown RBP10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 KLRK1P26718 216 aa10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 GPSM2P81274 684 aa10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 EZH2Q15910 746 aaKnown RBP10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 LHX8Q68G74 356 aa10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 MB21D2Q8IYB1 491 aaPredicted RBP10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 RGS22Q8NE09 1264 aa10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 NCOA7Q8NI08 942 aa10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 NSUN4Q96CB9 384 aaKnown RBP10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 RIOK1Q9BRS2 568 aaKnown RBP10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 ANO8Q9HCE9 1232 aaPredicted RBP10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 TPCN1Q9ULQ1 816 aa10.5□□□□□ -0.73
LSM3P5-201ENST00000566307 GSG1L2A8MUP6 293 aa10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 FRAT2O75474 233 aaPredicted RBP10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 CPA1P15085 419 aa10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 CYP7A1P22680 504 aa10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 SF3B2Q13435 895 aaKnown RBP10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 ME3Q16798 604 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms