RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 CC2D2BQ6DHV5 1058 aa11.82□□□□□ -0.52
TUBGCP4-211ENST00000566251 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
TUBGCP4-211ENST00000566251 WDR66Q8TBY9 1149 aa11.82□□□□□ -0.52
TUBGCP4-211ENST00000566251 KCNB2Q92953 911 aa11.82□□□□□ -0.52
TUBGCP4-211ENST00000566251 EYA3Q99504 573 aa11.82□□□□□ -0.52
TUBGCP4-211ENST00000566251 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
TUBGCP4-211ENST00000566251 RAI14Q9P0K7 980 aa11.82□□□□□ -0.52
TUBGCP4-211ENST00000566251 ARAP2Q8WZ64 1704 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 G3V3G9 751 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 PDE6AP16499 860 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 GNAT2P19087 354 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 POLD1P28340 1107 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 GPSM2P81274 684 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 TSGA10IPQ3SY00 556 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 PI16Q6UXB8 463 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 MPNDQ8N594 471 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 AIDAQ96BJ3 306 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 PIH1D3Q9NQM4 214 aaKnown RBP11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 ABCF2Q9UG63 623 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 SNX14Q9Y5W7 946 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 ZNF532Q9HCE3 1301 aa11.81□□□□□ -0.52
TUBGCP4-211ENST00000566251 QSER1Q2KHR3 1735 aa11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 SLC27A2O14975 620 aa11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 HMGB1P09429 215 aaKnown RBP11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 SLC4A3P48751 1232 aa11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 DPP8Q6V1X1 898 aaPredicted RBP11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 ZNF589Q86UQ0 364 aaPredicted RBP11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 MAGEB6Q8N7X4 407 aa11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 OSBP2Q969R2 916 aa11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 SEC62Q99442 399 aaKnown RBP11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 NACAP1Q9BZK3 213 aa11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 ZC3H12CQ9C0D7 883 aaKnown RBP11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 IL25Q9H293 177 aa11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 TNRC6CQ9HCJ0 1690 aaKnown RBP11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 MAST3O60307 1309 aa11.8□□□□□ -0.52
TUBGCP4-211ENST00000566251 GPAA1O43292 621 aa11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 APPP05067 770 aa11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 LDHCP07864 332 aa11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 HSPD1P10809 573 aaKnown RBP11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 GSTO1P78417 241 aa11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 ANKRD1Q15327 319 aa11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 IMMTQ16891 758 aaKnown RBP11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 TBC1D16Q8TBP0 767 aa11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 ZMYND15Q9H091 742 aa11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 CRISPLD2Q9H0B8 497 aa11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 PALD1Q9ULE6 856 aa11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 IQSEC3Q9UPP2 1182 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP4-211ENST00000566251 M0R2C6 588 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 CASTP20810 708 aaKnown RBP11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 CYP7A1P22680 504 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 CHAF1AQ13111 956 aaPredicted RBP11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 CAMK2BQ13554 666 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 NAA16Q6N069 864 aaPredicted RBP11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 CHADLQ6NUI6 762 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 BLOC1S2Q6QNY1 142 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 CCDC129Q6ZRS4 1044 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 CERS3Q8IU89 383 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 SLF2Q8IX21 1173 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 SUPT20HQ8NEM7 779 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 TDRD7Q8NHU6 1098 aaKnown RBP11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 TBC1D22AQ8WUA7 517 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 JAKMIP1Q96N16 626 aaKnown RBP11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 NOL10Q9BSC4 688 aaKnown RBP11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 COA1Q9GZY4 146 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 GPBP1L1Q9HC44 474 aaPredicted RBP11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 ZSWIM6Q9HCJ5 1215 aa11.78□□□□□ -0.52
TUBGCP4-211ENST00000566251 PATL2C9JE40 543 aaKnown RBP11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 ZNF213O14771 459 aa11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 LDHBP07195 334 aaKnown RBP11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 ALX1Q15699 326 aa11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 VPS53Q5VIR6 699 aa11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 RUFY3Q7L099 469 aa11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 IFNL1Q8IU54 200 aa11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 CHMP4CQ96CF2 233 aa11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 ZSCAN31Q96LW9 406 aaPredicted RBP11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 MTFR1LQ9H019 292 aa11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 PUS7LQ9H0K6 701 aaKnown RBP11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 PDRG1Q9NUG6 133 aa11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 PPP1R1BQ9UD71 204 aaPredicted RBP11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 WWC3Q9ULE0 1092 aa11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 SALL1Q9NSC2 1324 aa11.77□□□□□ -0.53
TUBGCP4-211ENST00000566251 MAGEB6P1A0A0J9YX57 407 aa11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 TCRBV5S4A2TA0A5A2 114 aa11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 IL1R1P14778 569 aa11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 TRDNQ13061 729 aa11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 DZIP1Q86YF9 867 aaKnown RBP11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 TTLL6Q8N841 843 aa11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 NEK1Q96PY6 1258 aa11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 STRBPQ96SI9 672 aaKnown RBP11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 ALDH8A1Q9H2A2 487 aaPredicted RBP11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 SPON1Q9HCB6 807 aa11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 CWC22Q9HCG8 908 aaKnown RBP11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 CD209Q9NNX6 404 aa11.76□□□□□ -0.53
TUBGCP4-211ENST00000566251 CASZ1Q86V15 1759 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms