RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 SCAF8Q9UPN6 1271 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-210ENST00000565966 MYH2Q9UKX2 1941 aa17.03■□□□□ 0.32
HERPUD1-210ENST00000565966 PCNTO95613 3336 aa17.02■□□□□ 0.32
HERPUD1-210ENST00000565966 COL1A1P02452 1464 aaPredicted RBP17.02■□□□□ 0.32
HERPUD1-210ENST00000565966 VEGFBP49765 207 aa17.02■□□□□ 0.32
HERPUD1-210ENST00000565966 HSP90AB4PQ58FF6 505 aa17.02■□□□□ 0.32
HERPUD1-210ENST00000565966 TNNI3KQ59H18 835 aa17.02■□□□□ 0.32
HERPUD1-210ENST00000565966 C2orf69Q8N8R5 385 aa17.02■□□□□ 0.32
HERPUD1-210ENST00000565966 HHIPL1Q96JK4 782 aa17.02■□□□□ 0.32
HERPUD1-210ENST00000565966 GBA2Q9HCG7 927 aaPredicted RBP17.02■□□□□ 0.32
HERPUD1-210ENST00000565966 FPGT-TNNI3KV9GXZ4 949 aa17.02■□□□□ 0.32
HERPUD1-210ENST00000565966 SALL1Q9NSC2 1324 aa17.01■□□□□ 0.31
HERPUD1-210ENST00000565966 ERC1Q8IUD2 1116 aa17.01■□□□□ 0.31
HERPUD1-210ENST00000565966 ZGPATQ8N5A5 531 aaKnown RBP17.01■□□□□ 0.31
HERPUD1-210ENST00000565966 TEKT1Q969V4 418 aa17.01■□□□□ 0.31
HERPUD1-210ENST00000565966 PCDHB15Q9Y5E8 787 aa17.01■□□□□ 0.31
HERPUD1-210ENST00000565966 AKAP11Q9UKA4 1901 aa17.01■□□□□ 0.31
HERPUD1-210ENST00000565966 PDS5AQ29RF7 1337 aaKnown RBP17■□□□□ 0.31
HERPUD1-210ENST00000565966 CLRN2A0PK11 232 aa17■□□□□ 0.31
HERPUD1-210ENST00000565966 ECE1P42892 770 aa17■□□□□ 0.31
HERPUD1-210ENST00000565966 RASGRF1Q13972 1273 aa17■□□□□ 0.31
HERPUD1-210ENST00000565966 HHIPL2Q6UWX4 724 aa17■□□□□ 0.31
HERPUD1-210ENST00000565966 WDR33Q9C0J8 1336 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 LDHBP07195 334 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 UQCRFS1P1P0C7P4 283 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 ARID4AP29374 1257 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 NF2P35240 595 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 HUNKP57058 714 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 FKBP1BP68106 108 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 CCDC158Q5M9N0 1113 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 PRAMEF18Q5VWM3 479 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 PAXIP1Q6ZW49 1069 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 RHPN1Q8TCX5 695 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 ZDHHC15Q96MV8 337 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 DEFB129Q9H1M3 183 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 TDRD3Q9H7E2 651 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 VEZTQ9HBM0 779 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 ZNF70Q9UC06 446 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 PPP2R3BQ9Y5P8 575 aa16.99■□□□□ 0.31
HERPUD1-210ENST00000565966 AOX1Q06278 1338 aa16.98■□□□□ 0.31
HERPUD1-210ENST00000565966 AK9Q5TCS8 1911 aa16.98■□□□□ 0.31
HERPUD1-210ENST00000565966 PAPPA2Q9BXP8 1791 aa16.98■□□□□ 0.31
HERPUD1-210ENST00000565966 PRDX5P30044 214 aa16.98■□□□□ 0.31
HERPUD1-210ENST00000565966 TNFAIP1Q13829 316 aa16.98■□□□□ 0.31
HERPUD1-210ENST00000565966 CYP4F22Q6NT55 531 aa16.98■□□□□ 0.31
HERPUD1-210ENST00000565966 EAF2Q96CJ1 260 aaPredicted RBP16.98■□□□□ 0.31
HERPUD1-210ENST00000565966 CAPNS2Q96L46 248 aa16.98■□□□□ 0.31
HERPUD1-210ENST00000565966 DBNDD2Q9BQY9 259 aa16.98■□□□□ 0.31
HERPUD1-210ENST00000565966 MYO5AQ9Y4I1 1855 aaKnown RBP16.97■□□□□ 0.31
HERPUD1-210ENST00000565966 APBB1O00213 710 aa16.97■□□□□ 0.31
HERPUD1-210ENST00000565966 RAB11FIP3O75154 756 aa16.97■□□□□ 0.31
HERPUD1-210ENST00000565966 SPTY2D1Q68D10 685 aaPredicted RBP16.97■□□□□ 0.31
HERPUD1-210ENST00000565966 SPATA5Q8NB90 893 aa16.97■□□□□ 0.31
HERPUD1-210ENST00000565966 EXOC6Q8TAG9 804 aa16.97■□□□□ 0.31
HERPUD1-210ENST00000565966 KIF1BPQ96EK5 621 aa16.97■□□□□ 0.31
HERPUD1-210ENST00000565966 IL1RAPL2Q9NP60 686 aa16.97■□□□□ 0.31
HERPUD1-210ENST00000565966 HMG20BQ9P0W2 317 aa16.97■□□□□ 0.31
HERPUD1-210ENST00000565966 ABCF2Q9UG63 623 aa16.97■□□□□ 0.31
HERPUD1-210ENST00000565966 TTC39AQ5SRH9 613 aa16.96■□□□□ 0.31
HERPUD1-210ENST00000565966 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-210ENST00000565966 RGMBQ6NW40 437 aa16.96■□□□□ 0.31
HERPUD1-210ENST00000565966 CCDC8Q9H0W5 538 aaPredicted RBP16.96■□□□□ 0.31
HERPUD1-210ENST00000565966 DCTPP1Q9H773 170 aa16.96■□□□□ 0.31
HERPUD1-210ENST00000565966 TLR7Q9NYK1 1049 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-210ENST00000565966 DBNLQ9UJU6 430 aaKnown RBP16.96■□□□□ 0.31
HERPUD1-210ENST00000565966 MCAMP43121 646 aa16.95■□□□□ 0.3
HERPUD1-210ENST00000565966 TNNI2P48788 182 aa16.95■□□□□ 0.3
HERPUD1-210ENST00000565966 GRM1Q13255 1194 aa16.95■□□□□ 0.3
HERPUD1-210ENST00000565966 AAMPQ13685 434 aa16.95■□□□□ 0.3
HERPUD1-210ENST00000565966 RASA3Q14644 834 aa16.95■□□□□ 0.3
HERPUD1-210ENST00000565966 SUPT20HL1Q3ZLR7 823 aa16.95■□□□□ 0.3
HERPUD1-210ENST00000565966 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
HERPUD1-210ENST00000565966 ZNF512BQ96KM6 892 aaPredicted RBP16.95■□□□□ 0.3
HERPUD1-210ENST00000565966 TCP10L2B9ZVM9 353 aa16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 MAP2K2P36507 400 aa16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 TTLL12Q14166 644 aaPredicted RBP16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 DIXDC1Q155Q3 683 aa16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 AACSQ86V21 672 aa16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 DZIP1Q86YF9 867 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 SLF2Q8IX21 1173 aa16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 CLASRPQ8N2M8 674 aaKnown RBP16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 TMOD2Q9NZR1 351 aa16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 DAGLAQ9Y4D2 1042 aa16.94■□□□□ 0.3
HERPUD1-210ENST00000565966 ZNF157P51786 506 aaPredicted RBP16.93■□□□□ 0.3
HERPUD1-210ENST00000565966 FKBP1CQ5VVH2 108 aa16.93■□□□□ 0.3
HERPUD1-210ENST00000565966 MOB2Q70IA6 237 aa16.93■□□□□ 0.3
HERPUD1-210ENST00000565966 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
HERPUD1-210ENST00000565966 CCDC102AQ96A19 550 aa16.93■□□□□ 0.3
HERPUD1-210ENST00000565966 FAM163AQ96GL9 167 aaPredicted RBP16.93■□□□□ 0.3
HERPUD1-210ENST00000565966 THSD7BQ9C0I4 1608 aa16.92■□□□□ 0.3
HERPUD1-210ENST00000565966 UBE2Q2LH0YL09 131 aa16.92■□□□□ 0.3
HERPUD1-210ENST00000565966 PPP1R12BO60237 982 aaPredicted RBP16.92■□□□□ 0.3
HERPUD1-210ENST00000565966 HSPA1AP0DMV8 641 aaKnown RBP16.92■□□□□ 0.3
HERPUD1-210ENST00000565966 HSPA1BP0DMV9 641 aaKnown RBP16.92■□□□□ 0.3
HERPUD1-210ENST00000565966 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
HERPUD1-210ENST00000565966 MAP2K1Q02750 393 aaPredicted RBP16.92■□□□□ 0.3
HERPUD1-210ENST00000565966 NBPF12Q5TAG4 269 aaPredicted RBP16.92■□□□□ 0.3
HERPUD1-210ENST00000565966 TBC1D9Q6ZT07 1266 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms