RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 DZIP1Q86YF9 867 aaKnown RBP22.48■■□□□ 1.19
COMMD4-213ENST00000565834 AIDAQ96BJ3 306 aa22.48■■□□□ 1.19
COMMD4-213ENST00000565834 NSUN4Q96CB9 384 aaKnown RBP22.48■■□□□ 1.19
COMMD4-213ENST00000565834 SCN9AQ15858 1988 aa22.47■■□□□ 1.19
COMMD4-213ENST00000565834 ECE2O60344 883 aa22.47■■□□□ 1.19
COMMD4-213ENST00000565834 HSPA4P34932 840 aa22.47■■□□□ 1.19
COMMD4-213ENST00000565834 MFSD14BQ5SR56 506 aa22.47■■□□□ 1.19
COMMD4-213ENST00000565834 FBXW7Q969H0 707 aa22.47■■□□□ 1.19
COMMD4-213ENST00000565834 FHDC1Q9C0D6 1143 aaPredicted RBP22.47■■□□□ 1.19
COMMD4-213ENST00000565834 RBM8AQ9Y5S9 174 aaKnown RBP22.47■■□□□ 1.19
COMMD4-213ENST00000565834 DSCC1Q9BVC3 393 aa22.46■■□□□ 1.19
COMMD4-213ENST00000565834 VPS33BQ9H267 617 aa22.46■■□□□ 1.19
COMMD4-213ENST00000565834 TTLL5Q6EMB2 1281 aa22.46■■□□□ 1.19
COMMD4-213ENST00000565834 ZNF384Q8TF68 577 aa22.46■■□□□ 1.19
COMMD4-213ENST00000565834 ZNF277Q9NRM2 450 aaPredicted RBP22.46■■□□□ 1.19
COMMD4-213ENST00000565834 GOLGB1Q14789 3259 aaKnown RBP22.45■■□□□ 1.18
COMMD4-213ENST00000565834 MYH2Q9UKX2 1941 aa22.45■■□□□ 1.18
COMMD4-213ENST00000565834 MBD4O95243 580 aa22.45■■□□□ 1.18
COMMD4-213ENST00000565834 HSPD1P10809 573 aaKnown RBP22.45■■□□□ 1.18
COMMD4-213ENST00000565834 VPS53Q5VIR6 699 aa22.45■■□□□ 1.18
COMMD4-213ENST00000565834 KIF2CQ99661 725 aa22.45■■□□□ 1.18
COMMD4-213ENST00000565834 TAOK3Q9H2K8 898 aa22.45■■□□□ 1.18
COMMD4-213ENST00000565834 U3KPZ7 1027 aaPredicted RBP22.45■■□□□ 1.18
COMMD4-213ENST00000565834 PSME4Q14997 1843 aa22.44■■□□□ 1.18
COMMD4-213ENST00000565834 ANAPC15P60006 121 aa22.44■■□□□ 1.18
COMMD4-213ENST00000565834 ADGRA1Q86SQ6 560 aa22.44■■□□□ 1.18
COMMD4-213ENST00000565834 LARGE2Q8N3Y3 721 aa22.44■■□□□ 1.18
COMMD4-213ENST00000565834 ZNF646O15015 1829 aaPredicted RBP22.44■■□□□ 1.18
COMMD4-213ENST00000565834 GSTO1P78417 241 aa22.43■■□□□ 1.18
COMMD4-213ENST00000565834 NECTIN1Q15223 517 aa22.43■■□□□ 1.18
COMMD4-213ENST00000565834 GRIK5Q16478 980 aa22.43■■□□□ 1.18
COMMD4-213ENST00000565834 MIGA1Q8NAN2 632 aa22.43■■□□□ 1.18
COMMD4-213ENST00000565834 STRBPQ96SI9 672 aaKnown RBP22.43■■□□□ 1.18
COMMD4-213ENST00000565834 PALD1Q9ULE6 856 aa22.43■■□□□ 1.18
COMMD4-213ENST00000565834 MAGEB6P1A0A0J9YX57 407 aa22.42■■□□□ 1.18
COMMD4-213ENST00000565834 ARMT1Q9H993 441 aa22.42■■□□□ 1.18
COMMD4-213ENST00000565834 SUGT1Q9Y2Z0 365 aa22.42■■□□□ 1.18
COMMD4-213ENST00000565834 IARSP41252 1262 aaKnown RBP22.42■■□□□ 1.18
COMMD4-213ENST00000565834 STRIP1Q5VSL9 837 aa22.42■■□□□ 1.18
COMMD4-213ENST00000565834 RNF20Q5VTR2 975 aa22.42■■□□□ 1.18
COMMD4-213ENST00000565834 USP17L3A6NCW0 530 aa22.41■■□□□ 1.18
COMMD4-213ENST00000565834 USP17L4A6NCW7 530 aa22.41■■□□□ 1.18
COMMD4-213ENST00000565834 CREB3L3Q68CJ9 461 aa22.41■■□□□ 1.18
COMMD4-213ENST00000565834 USP17L1Q7RTZ2 530 aa22.41■■□□□ 1.18
COMMD4-213ENST00000565834 LCORLQ8N3X6 602 aa22.41■■□□□ 1.18
COMMD4-213ENST00000565834 KCNQ5Q9NR82 932 aa22.41■■□□□ 1.18
COMMD4-213ENST00000565834 NFKBIEO00221 500 aa22.4■■□□□ 1.18
COMMD4-213ENST00000565834 LDHCP07864 332 aa22.4■■□□□ 1.18
COMMD4-213ENST00000565834 GNAT2P19087 354 aa22.4■■□□□ 1.18
COMMD4-213ENST00000565834 CERS5Q8N5B7 392 aa22.4■■□□□ 1.18
COMMD4-213ENST00000565834 DDRGK1Q96HY6 314 aa22.4■■□□□ 1.18
COMMD4-213ENST00000565834 COL4A5P29400 1685 aa22.4■■□□□ 1.18
COMMD4-213ENST00000565834 LTBP3Q9NS15 1303 aa22.4■■□□□ 1.18
COMMD4-213ENST00000565834 SLC27A2O14975 620 aa22.39■■□□□ 1.18
COMMD4-213ENST00000565834 FOXP2O15409 715 aa22.39■■□□□ 1.18
COMMD4-213ENST00000565834 ZKSCAN1P17029 563 aaPredicted RBP22.39■■□□□ 1.18
COMMD4-213ENST00000565834 FKBP1AP62942 108 aaKnown RBP22.39■■□□□ 1.18
COMMD4-213ENST00000565834 RABEP1Q15276 862 aa22.39■■□□□ 1.18
COMMD4-213ENST00000565834 SLF2Q8IX21 1173 aa22.39■■□□□ 1.18
COMMD4-213ENST00000565834 NIM1KQ8IY84 436 aa22.39■■□□□ 1.18
COMMD4-213ENST00000565834 KCNB2Q92953 911 aa22.39■■□□□ 1.18
COMMD4-213ENST00000565834 IL17RAQ96F46 866 aa22.39■■□□□ 1.18
COMMD4-213ENST00000565834 RIOK1Q9BRS2 568 aaKnown RBP22.39■■□□□ 1.18
COMMD4-213ENST00000565834 SYT17Q9BSW7 474 aa22.39■■□□□ 1.18
COMMD4-213ENST00000565834 SNX14Q9Y5W7 946 aa22.39■■□□□ 1.18
COMMD4-213ENST00000565834 YDJCA8MPS7 323 aa22.39■■□□□ 1.17
COMMD4-213ENST00000565834 DIXDC1Q155Q3 683 aa22.39■■□□□ 1.17
COMMD4-213ENST00000565834 DACT2Q5SW24 774 aa22.39■■□□□ 1.17
COMMD4-213ENST00000565834 RASEFQ8IZ41 740 aa22.39■■□□□ 1.17
COMMD4-213ENST00000565834 MXD3Q9BW11 206 aa22.39■■□□□ 1.17
COMMD4-213ENST00000565834 CTNNA3Q9UI47 895 aa22.39■■□□□ 1.17
COMMD4-213ENST00000565834 APPP05067 770 aa22.38■■□□□ 1.17
COMMD4-213ENST00000565834 DYNLL1P63167 89 aaKnown RBP22.38■■□□□ 1.17
COMMD4-213ENST00000565834 AATFQ9NY61 560 aaKnown RBP eCLIP22.38■■□□□ 1.17
COMMD4-213ENST00000565834 SLC4A4Q9Y6R1 1079 aa22.38■■□□□ 1.17
COMMD4-213ENST00000565834 MROH7-TTC4A0A0A0MT08 1334 aa22.38■■□□□ 1.17
COMMD4-213ENST00000565834 PATL2C9JE40 543 aaKnown RBP22.37■■□□□ 1.17
COMMD4-213ENST00000565834 NOL10Q9BSC4 688 aaKnown RBP22.37■■□□□ 1.17
COMMD4-213ENST00000565834 FGAP02671 866 aa22.36■■□□□ 1.17
COMMD4-213ENST00000565834 ZNRF3Q9ULT6 936 aa22.36■■□□□ 1.17
COMMD4-213ENST00000565834 TTF2Q9UNY4 1162 aaKnown RBP22.36■■□□□ 1.17
COMMD4-213ENST00000565834 LAMA4Q16363 1823 aa22.36■■□□□ 1.17
COMMD4-213ENST00000565834 RPAP1Q9BWH6 1393 aaPredicted RBP22.36■■□□□ 1.17
COMMD4-213ENST00000565834 F8W031 263 aaPredicted RBP22.36■■□□□ 1.17
COMMD4-213ENST00000565834 BAG3O95817 575 aa22.36■■□□□ 1.17
COMMD4-213ENST00000565834 JDP2Q8WYK2 163 aa22.36■■□□□ 1.17
COMMD4-213ENST00000565834 NACAP1Q9BZK3 213 aa22.36■■□□□ 1.17
COMMD4-213ENST00000565834 GSG1L2A8MUP6 293 aa22.35■■□□□ 1.17
COMMD4-213ENST00000565834 PRKAB2O43741 272 aa22.35■■□□□ 1.17
COMMD4-213ENST00000565834 CYP21A2P08686 494 aa22.35■■□□□ 1.17
COMMD4-213ENST00000565834 RASSF7Q02833 373 aa22.35■■□□□ 1.17
COMMD4-213ENST00000565834 ALX1Q15699 326 aa22.35■■□□□ 1.17
COMMD4-213ENST00000565834 FAM163AQ96GL9 167 aaPredicted RBP22.35■■□□□ 1.17
COMMD4-213ENST00000565834 CRNKL1Q9BZJ0 848 aaKnown RBP22.35■■□□□ 1.17
COMMD4-213ENST00000565834 ZMYM6O95789 1325 aa22.35■■□□□ 1.17
COMMD4-213ENST00000565834 IMMTQ16891 758 aaKnown RBP22.34■■□□□ 1.17
COMMD4-213ENST00000565834 TSGA10IPQ3SY00 556 aa22.34■■□□□ 1.17
COMMD4-213ENST00000565834 CERS3Q8IU89 383 aa22.34■■□□□ 1.17
COMMD4-213ENST00000565834 IFNL3Q8IZI9 196 aa22.34■■□□□ 1.17
COMMD4-213ENST00000565834 GAKO14976 1311 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms