RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CYP2E1P05181 493 aaPredicted RBP22.98■■□□□ 1.27
CSPG4P13-201ENST00000565545 LBX1P52954 281 aa22.98■■□□□ 1.27
CSPG4P13-201ENST00000565545 ZNF804AQ7Z570 1209 aa22.98■■□□□ 1.27
CSPG4P13-201ENST00000565545 MPNDQ8N594 471 aa22.98■■□□□ 1.27
CSPG4P13-201ENST00000565545 TBC1D16Q8TBP0 767 aa22.98■■□□□ 1.27
CSPG4P13-201ENST00000565545 HELLSQ9NRZ9 838 aa22.98■■□□□ 1.27
CSPG4P13-201ENST00000565545 DOCK2Q92608 1830 aa22.98■■□□□ 1.27
CSPG4P13-201ENST00000565545 IGSF3O75054 1194 aa22.97■■□□□ 1.27
CSPG4P13-201ENST00000565545 PI16Q6UXB8 463 aa22.97■■□□□ 1.27
CSPG4P13-201ENST00000565545 MED23Q9ULK4 1368 aa22.97■■□□□ 1.27
CSPG4P13-201ENST00000565545 ZMYM1Q5SVZ6 1142 aa22.96■■□□□ 1.27
CSPG4P13-201ENST00000565545 PAXIP1Q6ZW49 1069 aaPredicted RBP22.96■■□□□ 1.27
CSPG4P13-201ENST00000565545 NIM1KQ8IY84 436 aa22.96■■□□□ 1.27
CSPG4P13-201ENST00000565545 ANO2Q9NQ90 1003 aa22.96■■□□□ 1.27
CSPG4P13-201ENST00000565545 WDR33Q9C0J8 1336 aaKnown RBP22.96■■□□□ 1.27
CSPG4P13-201ENST00000565545 MCCP23508 829 aa22.95■■□□□ 1.26
CSPG4P13-201ENST00000565545 KLRK1P26718 216 aa22.95■■□□□ 1.26
CSPG4P13-201ENST00000565545 EPS15P42566 896 aa22.95■■□□□ 1.26
CSPG4P13-201ENST00000565545 MAP2K1Q02750 393 aaPredicted RBP22.95■■□□□ 1.26
CSPG4P13-201ENST00000565545 WASHC4Q2M389 1173 aa22.95■■□□□ 1.26
CSPG4P13-201ENST00000565545 MCMDC2Q4G0Z9 681 aa22.95■■□□□ 1.26
CSPG4P13-201ENST00000565545 FAM227BQ96M60 508 aa22.95■■□□□ 1.26
CSPG4P13-201ENST00000565545 POLLQ9UGP5 575 aa22.95■■□□□ 1.26
CSPG4P13-201ENST00000565545 A0A0D9SFI3 127 aa22.94■■□□□ 1.26
CSPG4P13-201ENST00000565545 C6orf229H3BNL8 230 aa22.94■■□□□ 1.26
CSPG4P13-201ENST00000565545 MAP3K12Q12852 859 aa22.94■■□□□ 1.26
CSPG4P13-201ENST00000565545 UBE3CQ15386 1083 aa22.94■■□□□ 1.26
CSPG4P13-201ENST00000565545 TMED8Q6PL24 325 aaPredicted RBP22.94■■□□□ 1.26
CSPG4P13-201ENST00000565545 DPP8Q6V1X1 898 aaPredicted RBP22.94■■□□□ 1.26
CSPG4P13-201ENST00000565545 PIH1D3Q9NQM4 214 aaKnown RBP22.94■■□□□ 1.26
CSPG4P13-201ENST00000565545 SNED1Q8TER0 1413 aa22.93■■□□□ 1.26
CSPG4P13-201ENST00000565545 PPIP5K2O43314 1243 aa22.93■■□□□ 1.26
CSPG4P13-201ENST00000565545 FRAT2O75474 233 aaPredicted RBP22.93■■□□□ 1.26
CSPG4P13-201ENST00000565545 SCNN1DP51172 638 aa22.93■■□□□ 1.26
CSPG4P13-201ENST00000565545 TXNRD3Q86VQ6 643 aa22.93■■□□□ 1.26
CSPG4P13-201ENST00000565545 TDRD7Q8NHU6 1098 aaKnown RBP22.93■■□□□ 1.26
CSPG4P13-201ENST00000565545 EYA3Q99504 573 aa22.93■■□□□ 1.26
CSPG4P13-201ENST00000565545 LSG1Q9H089 658 aaKnown RBP22.93■■□□□ 1.26
CSPG4P13-201ENST00000565545 MYO5AQ9Y4I1 1855 aaKnown RBP22.93■■□□□ 1.26
CSPG4P13-201ENST00000565545 GRM1Q13255 1194 aa22.92■■□□□ 1.26
CSPG4P13-201ENST00000565545 USP50Q70EL3 339 aaPredicted RBP22.92■■□□□ 1.26
CSPG4P13-201ENST00000565545 APPBP2Q92624 585 aa22.92■■□□□ 1.26
CSPG4P13-201ENST00000565545 IL25Q9H293 177 aa22.92■■□□□ 1.26
CSPG4P13-201ENST00000565545 IDH1O75874 414 aaKnown RBP22.91■■□□□ 1.26
CSPG4P13-201ENST00000565545 IL1R1P14778 569 aa22.91■■□□□ 1.26
CSPG4P13-201ENST00000565545 ADD2P35612 726 aa22.91■■□□□ 1.26
CSPG4P13-201ENST00000565545 SLC51AQ86UW1 340 aa22.91■■□□□ 1.26
CSPG4P13-201ENST00000565545 ZGPATQ8N5A5 531 aaKnown RBP22.91■■□□□ 1.26
CSPG4P13-201ENST00000565545 DDRGK1Q96HY6 314 aa22.91■■□□□ 1.26
CSPG4P13-201ENST00000565545 RTFDC1Q9BY42 306 aaPredicted RBP22.91■■□□□ 1.26
CSPG4P13-201ENST00000565545 DUOX1Q9NRD9 1551 aa22.91■■□□□ 1.26
CSPG4P13-201ENST00000565545 CCDC171Q6TFL3 1326 aa22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 HSPA8P11142 646 aaKnown RBP22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 ECE1P42892 770 aa22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 FMR1Q06787 632 aaKnown RBP eCLIP22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 SLC9C2Q5TAH2 1124 aa22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 SUPT20HQ8NEM7 779 aa22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 WDR66Q8TBY9 1149 aa22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 BEGAINQ9BUH8 593 aa22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 ZC3H12CQ9C0D7 883 aaKnown RBP22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 CD209Q9NNX6 404 aa22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 IQSEC3Q9UPP2 1182 aaPredicted RBP22.9■■□□□ 1.26
CSPG4P13-201ENST00000565545 SALL1Q9NSC2 1324 aa22.89■■□□□ 1.26
CSPG4P13-201ENST00000565545 ANAPC15P60006 121 aa22.89■■□□□ 1.25
CSPG4P13-201ENST00000565545 AOC3Q16853 763 aa22.89■■□□□ 1.25
CSPG4P13-201ENST00000565545 SPTY2D1Q68D10 685 aaPredicted RBP22.89■■□□□ 1.25
CSPG4P13-201ENST00000565545 CAPNS2Q96L46 248 aa22.89■■□□□ 1.25
CSPG4P13-201ENST00000565545 COA1Q9GZY4 146 aa22.89■■□□□ 1.25
CSPG4P13-201ENST00000565545 LRP2BPQ9P2M1 347 aa22.89■■□□□ 1.25
CSPG4P13-201ENST00000565545 COL1A1P02452 1464 aaPredicted RBP22.89■■□□□ 1.25
CSPG4P13-201ENST00000565545 ADAMTSL1Q8N6G6 1762 aa22.89■■□□□ 1.25
CSPG4P13-201ENST00000565545 COL4A5P29400 1685 aa22.88■■□□□ 1.25
CSPG4P13-201ENST00000565545 TRAF5O00463 557 aa22.88■■□□□ 1.25
CSPG4P13-201ENST00000565545 PDE6AP16499 860 aa22.88■■□□□ 1.25
CSPG4P13-201ENST00000565545 MAP4K1Q92918 833 aa22.88■■□□□ 1.25
CSPG4P13-201ENST00000565545 HSPA4P34932 840 aa22.87■■□□□ 1.25
CSPG4P13-201ENST00000565545 IL27Q8NEV9 243 aa22.87■■□□□ 1.25
CSPG4P13-201ENST00000565545 IL17RAQ96F46 866 aa22.87■■□□□ 1.25
CSPG4P13-201ENST00000565545 GPR101Q96P66 508 aaPredicted RBP22.87■■□□□ 1.25
CSPG4P13-201ENST00000565545 VPS33BQ9H267 617 aa22.87■■□□□ 1.25
CSPG4P13-201ENST00000565545 ADARB2Q9NS39 739 aaKnown RBP22.87■■□□□ 1.25
CSPG4P13-201ENST00000565545 ZNRF3Q9ULT6 936 aa22.87■■□□□ 1.25
CSPG4P13-201ENST00000565545 MAST3O60307 1309 aa22.86■■□□□ 1.25
CSPG4P13-201ENST00000565545 ZNF532Q9HCE3 1301 aa22.86■■□□□ 1.25
CSPG4P13-201ENST00000565545 CYP4F22Q6NT55 531 aa22.86■■□□□ 1.25
CSPG4P13-201ENST00000565545 ERICH6Q7L0X2 663 aa22.86■■□□□ 1.25
CSPG4P13-201ENST00000565545 ZNF589Q86UQ0 364 aaPredicted RBP22.86■■□□□ 1.25
CSPG4P13-201ENST00000565545 OSBP2Q969R2 916 aa22.86■■□□□ 1.25
CSPG4P13-201ENST00000565545 SEC62Q99442 399 aaKnown RBP22.86■■□□□ 1.25
CSPG4P13-201ENST00000565545 GPRC5DQ9NZD1 345 aa22.86■■□□□ 1.25
CSPG4P13-201ENST00000565545 ABCF2Q9UG63 623 aa22.86■■□□□ 1.25
CSPG4P13-201ENST00000565545 TCRBV5S4A2TA0A5A2 114 aa22.85■■□□□ 1.25
CSPG4P13-201ENST00000565545 PTH1RQ03431 593 aa22.85■■□□□ 1.25
CSPG4P13-201ENST00000565545 CXCL9Q07325 125 aa22.85■■□□□ 1.25
CSPG4P13-201ENST00000565545 CST9Q5W186 159 aa22.85■■□□□ 1.25
CSPG4P13-201ENST00000565545 MAGEB6Q8N7X4 407 aa22.85■■□□□ 1.25
CSPG4P13-201ENST00000565545 DSCC1Q9BVC3 393 aa22.85■■□□□ 1.25
CSPG4P13-201ENST00000565545 RAI14Q9P0K7 980 aa22.85■■□□□ 1.25
CSPG4P13-201ENST00000565545 MAST2Q6P0Q8 1798 aa22.84■■□□□ 1.25
CSPG4P13-201ENST00000565545 CHGBP05060 677 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms