RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 SIL1Q9H173 461 aa19.55■□□□□ 0.72
CDH3-204ENST00000565453 COPRSQ9NQ92 184 aa19.55■□□□□ 0.72
CDH3-204ENST00000565453 PA2G4Q9UQ80 394 aaKnown RBP19.55■□□□□ 0.72
CDH3-204ENST00000565453 TNNQ9UQP3 1299 aa19.55■□□□□ 0.72
CDH3-204ENST00000565453 FRAT2O75474 233 aaPredicted RBP19.54■□□□□ 0.72
CDH3-204ENST00000565453 TRIM27P14373 513 aa19.54■□□□□ 0.72
CDH3-204ENST00000565453 TM4SF4P48230 202 aa19.54■□□□□ 0.72
CDH3-204ENST00000565453 SUPT20HL1Q3ZLR7 823 aa19.54■□□□□ 0.72
CDH3-204ENST00000565453 MCOLN1Q9GZU1 580 aa19.54■□□□□ 0.72
CDH3-204ENST00000565453 PPP1R12BO60237 982 aaPredicted RBP19.53■□□□□ 0.72
CDH3-204ENST00000565453 IL15P40933 162 aaPredicted RBP19.53■□□□□ 0.72
CDH3-204ENST00000565453 SPRYD7Q5W111 196 aa19.53■□□□□ 0.72
CDH3-204ENST00000565453 TEPSINQ96N21 525 aa19.53■□□□□ 0.72
CDH3-204ENST00000565453 MRIQ9BWK5 157 aa19.53■□□□□ 0.72
CDH3-204ENST00000565453 SUGT1Q9Y2Z0 365 aa19.53■□□□□ 0.72
CDH3-204ENST00000565453 UNCXA6NJT0 531 aa19.52■□□□□ 0.72
CDH3-204ENST00000565453 IPO8O15397 1037 aaKnown RBP19.52■□□□□ 0.72
CDH3-204ENST00000565453 USP2O75604 605 aaPredicted RBP19.52■□□□□ 0.72
CDH3-204ENST00000565453 GNAI3P08754 354 aa19.52■□□□□ 0.72
CDH3-204ENST00000565453 MKRN3Q13064 507 aaKnown RBP19.52■□□□□ 0.72
CDH3-204ENST00000565453 MTX1Q13505 466 aa19.52■□□□□ 0.72
CDH3-204ENST00000565453 TNFAIP1Q13829 316 aa19.52■□□□□ 0.72
CDH3-204ENST00000565453 ATP2B3Q16720 1220 aa19.52■□□□□ 0.72
CDH3-204ENST00000565453 ATF7IPQ6VMQ6 1270 aa19.52■□□□□ 0.72
CDH3-204ENST00000565453 CDAN1Q8IWY9 1227 aa19.52■□□□□ 0.72
CDH3-204ENST00000565453 CEP126Q9P2H0 1117 aa19.52■□□□□ 0.72
CDH3-204ENST00000565453 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
CDH3-204ENST00000565453 TEKT1Q969V4 418 aa19.51■□□□□ 0.71
CDH3-204ENST00000565453 CLMNQ96JQ2 1002 aa19.51■□□□□ 0.71
CDH3-204ENST00000565453 ZDHHC15Q96MV8 337 aa19.51■□□□□ 0.71
CDH3-204ENST00000565453 MYH13Q9UKX3 1938 aa19.51■□□□□ 0.71
CDH3-204ENST00000565453 LAMB1P07942 1786 aa19.5■□□□□ 0.71
CDH3-204ENST00000565453 TCP10L2B9ZVM9 353 aa19.5■□□□□ 0.71
CDH3-204ENST00000565453 ZBTB22O15209 634 aa19.5■□□□□ 0.71
CDH3-204ENST00000565453 DGKZQ13574 1117 aa19.5■□□□□ 0.71
CDH3-204ENST00000565453 APOBEC3HQ6NTF7 200 aaKnown RBP19.5■□□□□ 0.71
CDH3-204ENST00000565453 WNK4Q96J92 1243 aa19.5■□□□□ 0.71
CDH3-204ENST00000565453 MAST3O60307 1309 aa19.5■□□□□ 0.71
CDH3-204ENST00000565453 SREBF2Q12772 1141 aa19.49■□□□□ 0.71
CDH3-204ENST00000565453 HHIPL2Q6UWX4 724 aa19.49■□□□□ 0.71
CDH3-204ENST00000565453 WDR66Q8TBY9 1149 aa19.49■□□□□ 0.71
CDH3-204ENST00000565453 FRAT1Q92837 279 aaPredicted RBP19.49■□□□□ 0.71
CDH3-204ENST00000565453 SLC10A4Q96EP9 437 aa19.49■□□□□ 0.71
CDH3-204ENST00000565453 TMEM39BQ9GZU3 492 aa19.49■□□□□ 0.71
CDH3-204ENST00000565453 OTOFQ9HC10 1997 aa19.49■□□□□ 0.71
CDH3-204ENST00000565453 SRGAP3O43295 1099 aa19.48■□□□□ 0.71
CDH3-204ENST00000565453 TBC1D8O95759 1140 aa19.48■□□□□ 0.71
CDH3-204ENST00000565453 ZBTB48P10074 688 aaPredicted RBP19.48■□□□□ 0.71
CDH3-204ENST00000565453 PHKA1P46020 1223 aa19.48■□□□□ 0.71
CDH3-204ENST00000565453 IREB2P48200 963 aaKnown RBP19.48■□□□□ 0.71
CDH3-204ENST00000565453 CFHR5Q9BXR6 569 aa19.48■□□□□ 0.71
CDH3-204ENST00000565453 ADORA1P30542 326 aa19.47■□□□□ 0.71
CDH3-204ENST00000565453 GJA5P36382 358 aa19.47■□□□□ 0.71
CDH3-204ENST00000565453 TNNI2P48788 182 aa19.47■□□□□ 0.71
CDH3-204ENST00000565453 CACNB3P54284 484 aa19.47■□□□□ 0.71
CDH3-204ENST00000565453 ANKRD13AQ8IZ07 590 aa19.47■□□□□ 0.71
CDH3-204ENST00000565453 CLUAP1Q96AJ1 413 aa19.47■□□□□ 0.71
CDH3-204ENST00000565453 MANSC4A6NHS7 340 aaPredicted RBP19.46■□□□□ 0.71
CDH3-204ENST00000565453 NOM1Q5C9Z4 860 aaKnown RBP19.46■□□□□ 0.71
CDH3-204ENST00000565453 FKBP1CQ5VVH2 108 aa19.46■□□□□ 0.71
CDH3-204ENST00000565453 TMEM57Q8N5G2 664 aa19.46■□□□□ 0.71
CDH3-204ENST00000565453 GNL3LQ9NVN8 582 aaKnown RBP19.46■□□□□ 0.71
CDH3-204ENST00000565453 SALL1Q9NSC2 1324 aa19.46■□□□□ 0.71
CDH3-204ENST00000565453 CCDC85CA6NKD9 419 aa19.45■□□□□ 0.7
CDH3-204ENST00000565453 SEMA3EO15041 775 aa19.45■□□□□ 0.7
CDH3-204ENST00000565453 GNAI2P04899 355 aa19.45■□□□□ 0.7
CDH3-204ENST00000565453 PRDX5P30044 214 aa19.45■□□□□ 0.7
CDH3-204ENST00000565453 ZKSCAN2Q63HK3 967 aa19.45■□□□□ 0.7
CDH3-204ENST00000565453 CCDC102BQ68D86 513 aa19.45■□□□□ 0.7
CDH3-204ENST00000565453 FAM83AQ86UY5 434 aa19.45■□□□□ 0.7
CDH3-204ENST00000565453 R3HDMLQ9H3Y0 253 aa19.45■□□□□ 0.7
CDH3-204ENST00000565453 DENND2AQ9ULE3 1009 aa19.45■□□□□ 0.7
CDH3-204ENST00000565453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.45■□□□□ 0.7
CDH3-204ENST00000565453 INHBEP58166 350 aa19.44■□□□□ 0.7
CDH3-204ENST00000565453 TFCP2Q12800 502 aa19.44■□□□□ 0.7
CDH3-204ENST00000565453 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.44■□□□□ 0.7
CDH3-204ENST00000565453 CTU1Q7Z7A3 348 aaKnown RBP19.44■□□□□ 0.7
CDH3-204ENST00000565453 ZNF296Q8WUU4 475 aaPredicted RBP19.44■□□□□ 0.7
CDH3-204ENST00000565453 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.44■□□□□ 0.7
CDH3-204ENST00000565453 DAGLAQ9Y4D2 1042 aa19.44■□□□□ 0.7
CDH3-204ENST00000565453 RPAP1Q9BWH6 1393 aaPredicted RBP19.44■□□□□ 0.7
CDH3-204ENST00000565453 PNMA6EA0A0J9YXQ4 647 aa19.43■□□□□ 0.7
CDH3-204ENST00000565453 GPR25O00155 361 aa19.43■□□□□ 0.7
CDH3-204ENST00000565453 IGF2BP3O00425 579 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDH3-204ENST00000565453 TIMM10P62072 90 aa19.43■□□□□ 0.7
CDH3-204ENST00000565453 DIXDC1Q155Q3 683 aa19.43■□□□□ 0.7
CDH3-204ENST00000565453 IFNL1Q8IU54 200 aa19.43■□□□□ 0.7
CDH3-204ENST00000565453 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDH3-204ENST00000565453 TMOD2Q9NZR1 351 aa19.43■□□□□ 0.7
CDH3-204ENST00000565453 A0A1B0GUL7 405 aa19.42■□□□□ 0.7
CDH3-204ENST00000565453 ALDH1A1P00352 501 aa19.42■□□□□ 0.7
CDH3-204ENST00000565453 MAP3K9P80192 1104 aa19.42■□□□□ 0.7
CDH3-204ENST00000565453 XAGE2Q96GT9 111 aa19.42■□□□□ 0.7
CDH3-204ENST00000565453 ELP3Q9H9T3 547 aa19.42■□□□□ 0.7
CDH3-204ENST00000565453 PDS5AQ29RF7 1337 aaKnown RBP19.42■□□□□ 0.7
CDH3-204ENST00000565453 ZBED9Q6R2W3 1325 aa19.42■□□□□ 0.7
CDH3-204ENST00000565453 TESPA1A2RU30 521 aaPredicted RBP19.41■□□□□ 0.7
CDH3-204ENST00000565453 LDHBP07195 334 aaKnown RBP19.41■□□□□ 0.7
CDH3-204ENST00000565453 RASGRF1Q13972 1273 aa19.41■□□□□ 0.7
CDH3-204ENST00000565453 VGLL4Q14135 290 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms