RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 GPR25O00155 361 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 ALDH1A1P00352 501 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 GNAI3P08754 354 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 FGFR2P21802 821 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 CACNB3P54284 484 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 MLLT1Q03111 559 aaPredicted RBP7.98□□□□□ -1.13
TCF4-228ENST00000565393 MAP3K11Q16584 847 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 ATP2B3Q16720 1220 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 SPDYE2Q495Y8 402 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 OTUD7BQ6GQQ9 843 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 ATG9AQ7Z3C6 839 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 CTU1Q7Z7A3 348 aaKnown RBP7.98□□□□□ -1.13
TCF4-228ENST00000565393 WDR66Q8TBY9 1149 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 ARHGAP45Q92619 1136 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 MEIS3Q99687 375 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 TMEM39BQ9GZU3 492 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 ELP3Q9H9T3 547 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 PA2G4Q9UQ80 394 aaKnown RBP7.98□□□□□ -1.13
TCF4-228ENST00000565393 AOX1Q06278 1338 aa7.98□□□□□ -1.13
TCF4-228ENST00000565393 SRGAP3O43295 1099 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 FKTNO75072 461 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 BCAR3O75815 825 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 CIAO1O76071 339 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 ZBTB48P10074 688 aaPredicted RBP7.97□□□□□ -1.13
TCF4-228ENST00000565393 IL15P40933 162 aaPredicted RBP7.97□□□□□ -1.13
TCF4-228ENST00000565393 TIMM10P62072 90 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 MAP3K9P80192 1104 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 PKN2Q16513 984 aaKnown RBP7.97□□□□□ -1.13
TCF4-228ENST00000565393 IFNL1Q8IU54 200 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 MIER1Q8N108 512 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 CLUAP1Q96AJ1 413 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 WNK4Q96J92 1243 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 ZDHHC15Q96MV8 337 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 NEUROD6Q96NK8 337 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 SUGT1Q9Y2Z0 365 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 MAST3O60307 1309 aa7.97□□□□□ -1.13
TCF4-228ENST00000565393 LDHBP07195 334 aaKnown RBP7.96□□□□□ -1.14
TCF4-228ENST00000565393 HNRNPUQ00839 825 aaKnown RBP eCLIP7.96□□□□□ -1.14
TCF4-228ENST00000565393 GORABQ5T7V8 394 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 DIEXFQ68CQ4 756 aaKnown RBP7.96□□□□□ -1.14
TCF4-228ENST00000565393 INTS3Q68E01 1043 aaKnown RBP7.96□□□□□ -1.14
TCF4-228ENST00000565393 APOBEC3HQ6NTF7 200 aaKnown RBP7.96□□□□□ -1.14
TCF4-228ENST00000565393 HHIPL2Q6UWX4 724 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 OPTNQ96CV9 577 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 HOOK2Q96ED9 719 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 TEPSINQ96N21 525 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 R3HDMLQ9H3Y0 253 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 USP40Q9NVE5 1235 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 DENND2AQ9ULE3 1009 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 AKAP2Q9Y2D5 859 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 CSADQ9Y600 493 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 SCN9AQ15858 1988 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 KIF16BQ96L93 1317 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 TRPM7Q96QT4 1865 aa7.96□□□□□ -1.14
TCF4-228ENST00000565393 GNAI2P04899 355 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 RGS19P49795 217 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 TCP10Q12799 353 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 TFCP2Q12800 502 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 G3BP1Q13283 466 aaKnown RBP eCLIP7.95□□□□□ -1.14
TCF4-228ENST00000565393 CCDC102BQ68D86 513 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 ATF7IPQ6VMQ6 1270 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.95□□□□□ -1.14
TCF4-228ENST00000565393 MIGA2Q7L4E1 593 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 CDAN1Q8IWY9 1227 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 OTUD5Q96G74 571 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 COPRSQ9NQ92 184 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 ABCF2Q9UG63 623 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 HPS5Q9UPZ3 1129 aa7.95□□□□□ -1.14
TCF4-228ENST00000565393 IGF2BP3O00425 579 aaKnown RBP eCLIP7.94□□□□□ -1.14
TCF4-228ENST00000565393 SEMA3EO15041 775 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 WDHD1O75717 1129 aaPredicted RBP7.94□□□□□ -1.14
TCF4-228ENST00000565393 TRIM27P14373 513 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 PRDX5P30044 214 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 ADORA1P30542 326 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 GJA5P36382 358 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 PHKA1P46020 1223 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 GTF2A2P52657 109 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 SOX10P56693 466 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 VGLL4Q14135 290 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 DIXDC1Q155Q3 683 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 NOM1Q5C9Z4 860 aaKnown RBP7.94□□□□□ -1.14
TCF4-228ENST00000565393 ZKSCAN2Q63HK3 967 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 DCAF15Q66K64 600 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 SPTY2D1Q68D10 685 aaPredicted RBP7.94□□□□□ -1.14
TCF4-228ENST00000565393 FAM83AQ86UY5 434 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 ZGPATQ8N5A5 531 aaKnown RBP7.94□□□□□ -1.14
TCF4-228ENST00000565393 FAM151AQ8WW52 585 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 CNKSR2Q8WXI2 1034 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 ZKSCAN4Q969J2 545 aaPredicted RBP7.94□□□□□ -1.14
TCF4-228ENST00000565393 WRNIP1Q96S55 665 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 PTPN18Q99952 460 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 TNNQ9UQP3 1299 aa7.94□□□□□ -1.14
TCF4-228ENST00000565393 COL1A1P02452 1464 aaPredicted RBP7.94□□□□□ -1.14
TCF4-228ENST00000565393 PAPPA2Q9BXP8 1791 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 CCL15-CCL14A0A0B4J2E2 113 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 A0A1B0GUL7 405 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 CRHR2Q13324 411 aa7.93□□□□□ -1.14
TCF4-228ENST00000565393 OS9Q13438 667 aaPredicted RBP7.93□□□□□ -1.14
TCF4-228ENST00000565393 MVPQ14764 893 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms