RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 TNNI3KQ59H18 835 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 TTC39AQ5SRH9 613 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 GABPB2Q8TAK5 448 aaPredicted RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 DACH1Q9UI36 760 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 FPGT-TNNI3KV9GXZ4 949 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 MARCKSP29966 332 aaPredicted RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 DOK7Q18PE1 504 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 TEX35Q5T0J7 233 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 RPAP2Q8IXW5 612 aaPredicted RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 NUP133Q8WUM0 1156 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 XAGE2Q96GT9 111 aa3.91□□□□□ -1.78
CHD9-213ENST00000564845 CICQ96RK0 1608 aaPredicted RBP3.91□□□□□ -1.78
CHD9-213ENST00000564845 B4E1Z4 1266 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 CELF1Q92879 486 aaKnown RBP3.9□□□□□ -1.78
CHD9-213ENST00000564845 UBR2Q8IWV8 1755 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 MCAMP43121 646 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 TOGARAM1Q9Y4F4 1720 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 CDKL5O76039 1030 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 ZSCAN25Q6NSZ9 544 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 CEP128Q6ZU80 1094 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 TRIML1Q8N9V2 468 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 LRRC45Q96CN5 670 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 MICU3Q86XE3 530 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 ZNF622Q969S3 477 aaKnown RBP eCLIP3.9□□□□□ -1.786e-7■■■□□ 18.6
CHD9-213ENST00000564845 IQCDQ96DY2 449 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 LRRC4BQ9NT99 713 aa3.9□□□□□ -1.78
CHD9-213ENST00000564845 PPP1R12BO60237 982 aaPredicted RBP3.9□□□□□ -1.79
CHD9-213ENST00000564845 PICALMQ13492 652 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 ARID5BQ14865 1188 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 NFIXQ14938 502 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 CCDC57Q2TAC2 916 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 ATG9AQ7Z3C6 839 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 U3KPZ7 1027 aaPredicted RBP3.9□□□□□ -1.79
CHD9-213ENST00000564845 ERICH2A1L162 156 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 AP5Z1O43299 807 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 GOLGA8HP0CJ92 632 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 USP8P40818 1118 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 CADPS2Q86UW7 1296 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 FAM184AQ8NB25 1140 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 LINC00116Q8NCU8 138 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 FAM107BQ9H098 131 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 CWC15Q9P013 229 aaKnown RBP3.9□□□□□ -1.79
CHD9-213ENST00000564845 CARMIL3Q8ND23 1372 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 SLC27A2O14975 620 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 GNAI3P08754 354 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 MAGEB6Q8N7X4 407 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 METTL22Q9BUU2 404 aaPredicted RBP3.9□□□□□ -1.79
CHD9-213ENST00000564845 LSG1Q9H089 658 aaKnown RBP3.9□□□□□ -1.79
CHD9-213ENST00000564845 PTPRCP08575 1304 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 EPB41L2O43491 1005 aaKnown RBP3.9□□□□□ -1.79
CHD9-213ENST00000564845 MTX1Q13505 466 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 CCDC178Q5BJE1 867 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 CREB3L3Q68CJ9 461 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 SLC44A5Q8NCS7 719 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 PIH1D3Q9NQM4 214 aaKnown RBP3.9□□□□□ -1.79
CHD9-213ENST00000564845 DDX21Q9NR30 783 aaKnown RBP eCLIP3.9□□□□□ -1.79
CHD9-213ENST00000564845 ARGLU1Q9NWB6 273 aaPredicted RBP3.9□□□□□ -1.79
CHD9-213ENST00000564845 C5P01031 1676 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 PKD1L3Q7Z443 1732 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 SORBS3O60504 671 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 DIXDC1Q155Q3 683 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 ZSCAN23Q3MJ62 389 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 TBC1D10BQ4KMP7 808 aaPredicted RBP3.9□□□□□ -1.79
CHD9-213ENST00000564845 SLC9C2Q5TAH2 1124 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 SLF2Q8IX21 1173 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 PGBD1Q96JS3 809 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 AATFQ9NY61 560 aaKnown RBP eCLIP3.9□□□□□ -1.79
CHD9-213ENST00000564845 USP25Q9UHP3 1055 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 ARHGEF10O15013 1369 aa3.9□□□□□ -1.79
CHD9-213ENST00000564845 GOLGA6L10A0A0M3HER8 536 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 SP100P23497 879 aaPredicted RBP3.89□□□□□ -1.79
CHD9-213ENST00000564845 ARID4AP29374 1257 aaPredicted RBP3.89□□□□□ -1.79
CHD9-213ENST00000564845 PRDX5P30044 214 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 ADD1P35611 737 aaKnown RBP3.89□□□□□ -1.79
CHD9-213ENST00000564845 FILIP1Q7Z7B0 1213 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 CCDC84Q86UT8 332 aaPredicted RBP3.89□□□□□ -1.79
CHD9-213ENST00000564845 CCDC102AQ96A19 550 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 PDRG1Q9NUG6 133 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 CYP2D6P10635 497 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 GUCY1A2P33402 732 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 GRAMD1CQ8IYS0 662 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 CNTROBQ8N137 903 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 KIF1BPQ96EK5 621 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 NRBP1Q9UHY1 535 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 KCNG1Q9UIX4 513 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 TCP10Q12799 353 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 SSH3Q8TE77 659 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 PAPPAQ13219 1627 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 LIG1P18858 919 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 PPP1R2P41236 205 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 SYNE3Q6ZMZ3 975 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 VAT1LQ9HCJ6 419 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 RNF216Q9NWF9 866 aaPredicted RBP3.89□□□□□ -1.79
CHD9-213ENST00000564845 KCNJ14Q9UNX9 436 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 DISP2A7MBM2 1401 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 PARP4Q9UKK3 1724 aaKnown RBP3.89□□□□□ -1.79
CHD9-213ENST00000564845 FAM205CA6NFA0 338 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 SCNN1DP51172 638 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 MCTP2Q6DN12 878 aa3.89□□□□□ -1.79
CHD9-213ENST00000564845 CYB5R4Q7L1T6 521 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms