RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 YEATS4O95619 227 aa18■□□□□ 0.47
GTF3C1-205ENST00000564747 IFIT5Q13325 482 aaKnown RBP18■□□□□ 0.47
GTF3C1-205ENST00000564747 NKX1-1Q15270 411 aaPredicted RBP18■□□□□ 0.47
GTF3C1-205ENST00000564747 SYNE3Q6ZMZ3 975 aa18■□□□□ 0.47
GTF3C1-205ENST00000564747 CADPS2Q86UW7 1296 aa18■□□□□ 0.47
GTF3C1-205ENST00000564747 TAOK2Q9UL54 1235 aa18■□□□□ 0.47
GTF3C1-205ENST00000564747 GTPBP4Q9BZE4 634 aaKnown RBP17.99■□□□□ 0.47
GTF3C1-205ENST00000564747 UBR2Q8IWV8 1755 aa17.99■□□□□ 0.47
GTF3C1-205ENST00000564747 ZNF202O95125 648 aa17.99■□□□□ 0.47
GTF3C1-205ENST00000564747 MCAMP43121 646 aa17.99■□□□□ 0.47
GTF3C1-205ENST00000564747 ZRSR1Q15695 479 aaKnown RBP17.99■□□□□ 0.47
GTF3C1-205ENST00000564747 BRAPQ7Z569 592 aa17.99■□□□□ 0.47
GTF3C1-205ENST00000564747 KIF23Q02241 960 aaPredicted RBP17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 PTPN14Q15678 1187 aa17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 NYAP1Q6ZVC0 841 aa17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 AIFM3Q96NN9 605 aa17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 NBPF3Q9H094 633 aa17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 FBXO3Q9UK99 471 aa17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 PCCAP05165 728 aaPredicted RBP17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 CSF1RP07333 972 aa17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 SLC3A2P08195 630 aaKnown RBP17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 AXDND1Q5T1B0 1012 aaPredicted RBP17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 ANO1Q5XXA6 986 aa17.98■□□□□ 0.47
GTF3C1-205ENST00000564747 RXRAP19793 462 aa17.97■□□□□ 0.47
GTF3C1-205ENST00000564747 MARCKSP29966 332 aaPredicted RBP17.97■□□□□ 0.47
GTF3C1-205ENST00000564747 WDHD1O75717 1129 aaPredicted RBP17.97■□□□□ 0.47
GTF3C1-205ENST00000564747 IL2RBP14784 551 aa17.97■□□□□ 0.47
GTF3C1-205ENST00000564747 TRIM28Q13263 835 aaKnown RBP17.97■□□□□ 0.47
GTF3C1-205ENST00000564747 SYCP1Q15431 976 aa17.97■□□□□ 0.47
GTF3C1-205ENST00000564747 METTL24Q5JXM2 366 aa17.97■□□□□ 0.47
GTF3C1-205ENST00000564747 ISM2Q6H9L7 571 aa17.97■□□□□ 0.47
GTF3C1-205ENST00000564747 XPO4Q9C0E2 1151 aaKnown RBP17.97■□□□□ 0.47
GTF3C1-205ENST00000564747 CCAR2Q8N163 923 aaKnown RBP17.96■□□□□ 0.47
GTF3C1-205ENST00000564747 IFNKQ9P0W0 207 aa17.96■□□□□ 0.47
GTF3C1-205ENST00000564747 RIPOR2Q9Y4F9 1068 aa17.96■□□□□ 0.47
GTF3C1-205ENST00000564747 SMC2O95347 1197 aa17.96■□□□□ 0.47
GTF3C1-205ENST00000564747 PFKFB1P16118 471 aa17.96■□□□□ 0.47
GTF3C1-205ENST00000564747 SLC9C2Q5TAH2 1124 aa17.96■□□□□ 0.47
GTF3C1-205ENST00000564747 LDHAL6AQ6ZMR3 332 aa17.96■□□□□ 0.47
GTF3C1-205ENST00000564747 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.47
GTF3C1-205ENST00000564747 ZBTB38Q8NAP3 1195 aaPredicted RBP17.96■□□□□ 0.47
GTF3C1-205ENST00000564747 DCCP43146 1447 aa17.96■□□□□ 0.47
GTF3C1-205ENST00000564747 GPTP24298 496 aa17.96■□□□□ 0.46
GTF3C1-205ENST00000564747 TBC1D10CQ8IV04 446 aa17.96■□□□□ 0.46
GTF3C1-205ENST00000564747 DNAJC10Q8IXB1 793 aa17.96■□□□□ 0.46
GTF3C1-205ENST00000564747 PLA2G12BQ9BX93 195 aa17.96■□□□□ 0.46
GTF3C1-205ENST00000564747 CMA1P23946 247 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 TRDNQ13061 729 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 BPIFA3Q9BQP9 254 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 OSBPL5Q9H0X9 879 aaPredicted RBP17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 GREM2Q9H772 168 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 SENP2Q9HC62 589 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 MROH7-TTC4A0A0A0MT08 1334 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 ITGA6P23229 1130 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 ADD2P35612 726 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 GSDMDP57764 484 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 NLRP12P59046 1061 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 STRN4Q9NRL3 753 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 ASAP1Q9ULH1 1129 aa17.95■□□□□ 0.46
GTF3C1-205ENST00000564747 TNS2Q63HR2 1409 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 STRCP1A6NGW2 1772 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 APPP05067 770 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 NCAPHQ15003 741 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 SLC39A14Q15043 492 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 HLFQ16534 295 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 KIF6Q6ZMV9 814 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 TMC6Q7Z403 805 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 PHKBQ93100 1093 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 ALG1Q9BT22 464 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 ANGEL1Q9UNK9 670 aaKnown RBP17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 RIC1Q4ADV7 1423 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 IDH1O75874 414 aaKnown RBP17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 TTLL11Q8NHH1 800 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 PIH1D3Q9NQM4 214 aaKnown RBP17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 TMOD3Q9NYL9 352 aa17.94■□□□□ 0.46
GTF3C1-205ENST00000564747 CDC27P30260 824 aa17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 METAP2P50579 478 aaKnown RBP eCLIP17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 ARMCX5Q6P1M9 558 aa17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 IMPACTQ9P2X3 320 aa17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 ZNF215Q9UL58 517 aaPredicted RBP17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 WDR19Q8NEZ3 1342 aa17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 VPS37DQ86XT2 251 aa17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 FEZ1Q99689 392 aa17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 INCENPQ9NQS7 918 aa17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 CNNM1Q9NRU3 951 aa17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 ZMYM6O95789 1325 aa17.93■□□□□ 0.46
GTF3C1-205ENST00000564747 B4E1Z4 1266 aa17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 KRT40Q6A162 431 aa17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 BRINP3Q76B58 766 aa17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 CARD10Q9BWT7 1032 aa17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 V9GYY5 206 aaPredicted RBP17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 ABCC12Q96J65 1359 aa17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 SH2B2O14492 632 aaPredicted RBP17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 KIF20AO95235 890 aa17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 LMOD1P29536 600 aaPredicted RBP17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 E4F1Q66K89 784 aaPredicted RBP17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 APOA5Q6Q788 366 aa17.92■□□□□ 0.46
GTF3C1-205ENST00000564747 MICU3Q86XE3 530 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms