RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 SPON2Q9BUD6 331 aa7.63□□□□□ -1.19
CDH1-207ENST00000564745 CARD10Q9BWT7 1032 aa7.63□□□□□ -1.19
CDH1-207ENST00000564745 DNAJA1P31689 397 aaKnown RBP7.62□□□□□ -1.19
CDH1-207ENST00000564745 PPP2R3AQ06190 1150 aa7.62□□□□□ -1.19
CDH1-207ENST00000564745 CAMK2GQ13555 558 aaPredicted RBP7.62□□□□□ -1.19
CDH1-207ENST00000564745 SULF2Q8IWU5 870 aa7.62□□□□□ -1.19
CDH1-207ENST00000564745 SLC43A3Q8NBI5 491 aa7.62□□□□□ -1.19
CDH1-207ENST00000564745 ZNF296Q8WUU4 475 aaPredicted RBP7.62□□□□□ -1.19
CDH1-207ENST00000564745 PPME1Q9Y570 386 aa7.62□□□□□ -1.19
CDH1-207ENST00000564745 ECEL1O95672 775 aa7.61□□□□□ -1.19
CDH1-207ENST00000564745 HOXB4P17483 251 aaPredicted RBP7.61□□□□□ -1.19
CDH1-207ENST00000564745 NME2P22392 152 aa7.61□□□□□ -1.19
CDH1-207ENST00000564745 AMPD1P23109 780 aa7.61□□□□□ -1.19
CDH1-207ENST00000564745 GJA8P48165 433 aa7.61□□□□□ -1.19
CDH1-207ENST00000564745 CABP4P57796 275 aa7.61□□□□□ -1.19
CDH1-207ENST00000564745 PWP1Q13610 501 aa7.61□□□□□ -1.19
CDH1-207ENST00000564745 KANK3Q6NY19 840 aa7.61□□□□□ -1.19
CDH1-207ENST00000564745 KIAA0825Q8IV33 1275 aa7.61□□□□□ -1.19
CDH1-207ENST00000564745 DRC1Q96MC2 740 aa7.61□□□□□ -1.19
CDH1-207ENST00000564745 FAM177BA6PVY3 158 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 TM4SF5O14894 197 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 RLBP1P12271 317 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 CRKP46108 304 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 GSTM4Q03013 218 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 LMNB2Q03252 620 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 PTPN11Q06124 597 aaPredicted RBP7.6□□□□□ -1.19
CDH1-207ENST00000564745 SEPT6Q14141 434 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 MSL1Q68DK7 614 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 BNC2Q6ZN30 1099 aaPredicted RBP7.6□□□□□ -1.19
CDH1-207ENST00000564745 PDZD3Q86UT5 571 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 WFDC8Q8IUA0 241 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 DMRTC2Q8IXT2 367 aaPredicted RBP7.6□□□□□ -1.19
CDH1-207ENST00000564745 GOLM1Q8NBJ4 401 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 GPRASP2Q96D09 838 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 TANGO6Q9C0B7 1094 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 ZC3H12CQ9C0D7 883 aaKnown RBP7.6□□□□□ -1.19
CDH1-207ENST00000564745 CBX8Q9HC52 389 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 UBP1Q9NZI7 540 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 PRKAG2Q9UGJ0 569 aa7.6□□□□□ -1.19
CDH1-207ENST00000564745 FSCN2O14926 492 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 GREM1O60565 184 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 CTSBP07858 339 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 NID1P14543 1247 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 ARNTP27540 789 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 RPS26P62854 115 aaKnown RBP7.59□□□□□ -1.19
CDH1-207ENST00000564745 SNAP47Q5SQN1 464 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 GALNT11Q8NCW6 608 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 FBXO27Q8NI29 283 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 JARID2Q92833 1246 aaPredicted RBP7.59□□□□□ -1.19
CDH1-207ENST00000564745 KLHDC7BQ96G42 594 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 NRSN2Q9GZP1 204 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 KCNQ5Q9NR82 932 aa7.59□□□□□ -1.19
CDH1-207ENST00000564745 TLR3O15455 904 aaKnown RBP7.58□□□□□ -1.2
CDH1-207ENST00000564745 F13A1P00488 732 aa7.58□□□□□ -1.2
CDH1-207ENST00000564745 ZNF252P-AS1Q0IIN9 211 aa7.58□□□□□ -1.2
CDH1-207ENST00000564745 C19orf57Q0VDD7 668 aa7.58□□□□□ -1.2
CDH1-207ENST00000564745 GNL2Q13823 731 aaKnown RBP7.58□□□□□ -1.2
CDH1-207ENST00000564745 SETDB1Q15047 1291 aa7.58□□□□□ -1.2
CDH1-207ENST00000564745 ZNF385CQ66K41 422 aaPredicted RBP7.58□□□□□ -1.2
CDH1-207ENST00000564745 ILDR2Q71H61 639 aa7.58□□□□□ -1.2
CDH1-207ENST00000564745 CACTIN-AS1Q8N1I8 211 aa7.58□□□□□ -1.2
CDH1-207ENST00000564745 DHX38Q92620 1227 aaKnown RBP7.58□□□□□ -1.2
CDH1-207ENST00000564745 GAL3ST3Q96A11 431 aa7.58□□□□□ -1.2
CDH1-207ENST00000564745 GMLQ99445 158 aa7.58□□□□□ -1.2
CDH1-207ENST00000564745 LOC105371045A0A1W2PR82 267 aa7.57□□□□□ -1.2
CDH1-207ENST00000564745 FAM181BA6NEQ2 426 aa7.57□□□□□ -1.2
CDH1-207ENST00000564745 DDX3YO15523 660 aaKnown RBP7.57□□□□□ -1.2
CDH1-207ENST00000564745 DEAF1O75398 565 aaPredicted RBP7.57□□□□□ -1.2
CDH1-207ENST00000564745 ATF4P18848 351 aaPredicted RBP7.57□□□□□ -1.2
CDH1-207ENST00000564745 DGKGP49619 791 aa7.57□□□□□ -1.2
CDH1-207ENST00000564745 PIP4K2BP78356 416 aa7.57□□□□□ -1.2
CDH1-207ENST00000564745 ARID5AQ03989 594 aa7.57□□□□□ -1.2
CDH1-207ENST00000564745 MAP1SQ66K74 1059 aaPredicted RBP7.57□□□□□ -1.2
CDH1-207ENST00000564745 LLGL2Q6P1M3 1020 aa7.57□□□□□ -1.2
CDH1-207ENST00000564745 MCF2L2Q86YR7 1114 aa7.57□□□□□ -1.2
CDH1-207ENST00000564745 TRIM42Q8IWZ5 723 aa7.57□□□□□ -1.2
CDH1-207ENST00000564745 RASGRP4Q8TDF6 673 aa7.57□□□□□ -1.2
CDH1-207ENST00000564745 SOX17Q9H6I2 414 aaPredicted RBP7.57□□□□□ -1.2
CDH1-207ENST00000564745 PRDM6Q9NQX0 595 aa7.57□□□□□ -1.2
CDH1-207ENST00000564745 SUPT16HQ9Y5B9 1047 aaKnown RBP7.57□□□□□ -1.2
CDH1-207ENST00000564745 ADAM11O75078 769 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 GSTP1P09211 210 aaKnown RBP7.56□□□□□ -1.2
CDH1-207ENST00000564745 CDK8P49336 464 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 NLRP12P59046 1061 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 SF3A1Q15459 793 aaKnown RBP7.56□□□□□ -1.2
CDH1-207ENST00000564745 FAM117BQ6P1L5 589 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.56□□□□□ -1.2
CDH1-207ENST00000564745 FAM196AQ6ZSG2 479 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 KCNB2Q92953 911 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 NT5C1AQ9BXI3 368 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 RRAGCQ9HB90 399 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 LRRC4BQ9NT99 713 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 GINM1Q9NU53 330 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 KCNK4Q9NYG8 393 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 CYP8B1Q9UNU6 501 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 EFR3BQ9Y2G0 817 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 SAMM50Q9Y512 469 aa7.56□□□□□ -1.2
CDH1-207ENST00000564745 FAM221AA4D161 298 aa7.55□□□□□ -1.2
CDH1-207ENST00000564745 FGRP09769 529 aa7.55□□□□□ -1.2
CDH1-207ENST00000564745 SELPP16109 830 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms