RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 KIF18AQ8NI77 898 aa8.86□□□□□ -0.99
ATXN3-249ENST00000564606 PYM1Q9BRP8 204 aaKnown RBP8.86□□□□□ -0.99
ATXN3-249ENST00000564606 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
ATXN3-249ENST00000564606 GTPBP4Q9BZE4 634 aaKnown RBP8.86□□□□□ -0.99
ATXN3-249ENST00000564606 TTC12Q9H892 705 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-249ENST00000564606 EMILIN3Q9NT22 766 aa8.86□□□□□ -0.99
ATXN3-249ENST00000564606 TLR7Q9NYK1 1049 aaKnown RBP8.86□□□□□ -0.99
ATXN3-249ENST00000564606 TFIP11Q9UBB9 837 aaKnown RBP8.86□□□□□ -0.99
ATXN3-249ENST00000564606 AXIN2Q9Y2T1 843 aa8.86□□□□□ -0.99
ATXN3-249ENST00000564606 USP16Q9Y5T5 823 aa8.86□□□□□ -0.99
ATXN3-249ENST00000564606 PKD1L3Q7Z443 1732 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 ZMYM6O95789 1325 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 SPATA31A3Q5VYP0 1347 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 ADAMTSL3P82987 1691 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 ERICH2A1L162 156 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 IKBKBO14920 756 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 PPP6R2O75170 966 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 NR1I2O75469 434 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 BMP15O95972 392 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 PDIA3P30101 505 aaKnown RBP8.85□□□□□ -0.99
ATXN3-249ENST00000564606 CASP7P55210 303 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 FOXO4P98177 505 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 TOM1L2Q6ZVM7 507 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 LRP10Q7Z4F1 713 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 CKAP2LQ8IYA6 745 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 FSIP1Q8NA03 581 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 ZBTB38Q8NAP3 1195 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-249ENST00000564606 SPC24Q8NBT2 197 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 CARD10Q9BWT7 1032 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 NACAP1Q9BZK3 213 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 KRT23Q9C075 422 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 OCEL1Q9H607 264 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 ZNF609O15014 1411 aa8.85□□□□□ -0.99
ATXN3-249ENST00000564606 MAP3K15Q6ZN16 1313 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 ANKRD18BA2A2Z9 1011 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 SPTLC2O15270 562 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 SLC3A2P08195 630 aaKnown RBP8.84□□□□□ -0.99
ATXN3-249ENST00000564606 TNNT1P13805 278 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 CMA1P23946 247 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 PIP4K2AP48426 406 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-249ENST00000564606 ST3GAL1Q11201 340 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 UBE3CQ15386 1083 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 PPP1R15BQ5SWA1 713 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 TAF3Q5VWG9 929 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 LUZP1Q86V48 1076 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 FCHSD1Q86WN1 690 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 TRIM22Q8IYM9 498 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 FBXO18Q8NFZ0 1043 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 DDX11Q96FC9 970 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 ISCA1Q9BUE6 129 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 DNAJC25Q9H1X3 360 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 RNF41Q9H4P4 317 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-249ENST00000564606 PRDM11Q9NQV5 511 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 ARGLU1Q9NWB6 273 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-249ENST00000564606 TMOD3Q9NYL9 352 aa8.84□□□□□ -0.99
ATXN3-249ENST00000564606 ORC3Q9UBD5 711 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-249ENST00000564606 ARIH1Q9Y4X5 557 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-249ENST00000564606 MROH5Q6ZUA9 1318 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 SALL1Q9NSC2 1324 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 PSDA5PKW4 1024 aaPredicted RBP8.83□□□□□ -1
ATXN3-249ENST00000564606 GOLGA8BA8MQT2 603 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 ATP5J2-PTCD1G3V325 749 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 KIF3CO14782 793 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 CYP27B1O15528 508 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 ZSCAN12O43309 604 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 CTIFO43310 598 aaKnown RBP8.83□□□□□ -1
ATXN3-249ENST00000564606 PRC1O43663 620 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 PTCD1O75127 700 aaKnown RBP8.83□□□□□ -1
ATXN3-249ENST00000564606 SFPQP23246 707 aaKnown RBP eCLIP8.83□□□□□ -1
ATXN3-249ENST00000564606 CLCN6P51797 869 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 EVA1CP58658 441 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 NLRP12P59046 1061 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 RBM10P98175 930 aaKnown RBP8.83□□□□□ -1
ATXN3-249ENST00000564606 FKBP4Q02790 459 aaKnown RBP eCLIP8.83□□□□□ -1
ATXN3-249ENST00000564606 APOBRQ0VD83 1088 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 MAP3K12Q12852 859 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 ALX1Q15699 326 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 EPHA10Q5JZY3 1008 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 UTP14CQ5TAP6 766 aaKnown RBP8.83□□□□□ -1
ATXN3-249ENST00000564606 CEP135Q66GS9 1140 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 ATG9AQ7Z3C6 839 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 LRRC8AQ8IWT6 810 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 OSBPL5Q9H0X9 879 aaPredicted RBP8.83□□□□□ -1
ATXN3-249ENST00000564606 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
ATXN3-249ENST00000564606 ANGEL1Q9UNK9 670 aaKnown RBP8.83□□□□□ -1
ATXN3-249ENST00000564606 MAST3O60307 1309 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 STK36Q9NRP7 1315 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 AFDNP55196 1824 aaKnown RBP8.82□□□□□ -1
ATXN3-249ENST00000564606 RGPD2P0DJD1 1756 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 MEGF6O75095 1541 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 KLF18A0A0U1RQI7 1052 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 PRAMEF22A3QJZ6 481 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 JAK2O60674 1132 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 CUTAO60888 179 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 PCP11498 1178 aaKnown RBP8.82□□□□□ -1
ATXN3-249ENST00000564606 SKILP12757 684 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 PTGS1P23219 599 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 METAP2P50579 478 aaKnown RBP eCLIP8.82□□□□□ -1
ATXN3-249ENST00000564606 IQCB1Q15051 598 aa8.82□□□□□ -1
ATXN3-249ENST00000564606 ATP2B3Q16720 1220 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms