RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 WTIPA6NIX2 430 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-210ENST00000564587 E7EWF7 191 aa18.46■□□□□ 0.55
COMMD4-210ENST00000564587 MBD4O95243 580 aa18.46■□□□□ 0.55
COMMD4-210ENST00000564587 APPP05067 770 aa18.46■□□□□ 0.55
COMMD4-210ENST00000564587 PDIA4P13667 645 aaKnown RBP18.46■□□□□ 0.55
COMMD4-210ENST00000564587 KLRK1P26718 216 aa18.46■□□□□ 0.55
COMMD4-210ENST00000564587 MSL1Q68DK7 614 aa18.46■□□□□ 0.55
COMMD4-210ENST00000564587 NAA16Q6N069 864 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-210ENST00000564587 TBC1D16Q8TBP0 767 aa18.46■□□□□ 0.55
COMMD4-210ENST00000564587 MAGEB6P1A0A0J9YX57 407 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 FOXP2O15409 715 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 IL1R1P14778 569 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 GSTO1P78417 241 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 RAB3GAP1Q15042 981 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 NFKBIBQ15653 356 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 C2CD5Q86YS7 1000 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 CERS3Q8IU89 383 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 FBXL16Q8N461 479 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 CNKSR1Q969H4 720 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 CCDC88AQ3V6T2 1871 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 WDR19Q8NEZ3 1342 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 MAST2Q6P0Q8 1798 aa18.45■□□□□ 0.54
COMMD4-210ENST00000564587 TRDNQ13061 729 aa18.44■□□□□ 0.54
COMMD4-210ENST00000564587 TXNRD3Q86VQ6 643 aa18.44■□□□□ 0.54
COMMD4-210ENST00000564587 MPNDQ8N594 471 aa18.44■□□□□ 0.54
COMMD4-210ENST00000564587 NCOA7Q8NI08 942 aa18.44■□□□□ 0.54
COMMD4-210ENST00000564587 TBC1D22AQ8WUA7 517 aa18.44■□□□□ 0.54
COMMD4-210ENST00000564587 NAPBQ9H115 298 aa18.44■□□□□ 0.54
COMMD4-210ENST00000564587 CD209Q9NNX6 404 aa18.44■□□□□ 0.54
COMMD4-210ENST00000564587 FOXD4L1Q9NU39 408 aa18.44■□□□□ 0.54
COMMD4-210ENST00000564587 DCAF8L1A6NGE4 600 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 C6orf229H3BNL8 230 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 LDHCP07864 332 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 CPA1P15085 419 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 FGD1P98174 961 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 CHAF1AQ13111 956 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-210ENST00000564587 GRIPAP1Q4V328 841 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 CC2D2BQ6DHV5 1058 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 GIMAP6Q6P9H5 292 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 NOL8Q76FK4 1167 aaKnown RBP18.43■□□□□ 0.54
COMMD4-210ENST00000564587 RALYLQ86SE5 291 aaKnown RBP18.43■□□□□ 0.54
COMMD4-210ENST00000564587 IFNL3Q8IZI9 196 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 NSUN4Q96CB9 384 aaKnown RBP18.43■□□□□ 0.54
COMMD4-210ENST00000564587 EYA3Q99504 573 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 COA1Q9GZY4 146 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 ARMT1Q9H993 441 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 SLC4A4Q9Y6R1 1079 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 CACNA1SQ13698 1873 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 LTBP1Q14766 1721 aa18.43■□□□□ 0.54
COMMD4-210ENST00000564587 PTMSP20962 102 aa18.42■□□□□ 0.54
COMMD4-210ENST00000564587 EXOSC10Q01780 885 aaKnown RBP18.42■□□□□ 0.54
COMMD4-210ENST00000564587 TTLL5Q6EMB2 1281 aa18.42■□□□□ 0.54
COMMD4-210ENST00000564587 STOX1Q6ZVD7 989 aa18.42■□□□□ 0.54
COMMD4-210ENST00000564587 ZNF622Q969S3 477 aaKnown RBP eCLIP18.42■□□□□ 0.54
COMMD4-210ENST00000564587 GBP4Q96PP9 640 aa18.42■□□□□ 0.54
COMMD4-210ENST00000564587 AGXT2Q9BYV1 514 aa18.42■□□□□ 0.54
COMMD4-210ENST00000564587 POLLQ9UGP5 575 aa18.42■□□□□ 0.54
COMMD4-210ENST00000564587 TAF6LQ9Y6J9 622 aa18.42■□□□□ 0.54
COMMD4-210ENST00000564587 LAMA4Q16363 1823 aa18.42■□□□□ 0.54
COMMD4-210ENST00000564587 KIAA1551Q9HCM1 1747 aa18.41■□□□□ 0.54
COMMD4-210ENST00000564587 GSG1L2A8MUP6 293 aa18.41■□□□□ 0.54
COMMD4-210ENST00000564587 LDHBP07195 334 aaKnown RBP18.41■□□□□ 0.54
COMMD4-210ENST00000564587 MCM5P33992 734 aa18.41■□□□□ 0.54
COMMD4-210ENST00000564587 MECOMQ03112 1051 aa18.41■□□□□ 0.54
COMMD4-210ENST00000564587 DPP8Q6V1X1 898 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-210ENST00000564587 Q6ZUG5 572 aa18.41■□□□□ 0.54
COMMD4-210ENST00000564587 DZIP1Q86YF9 867 aaKnown RBP18.41■□□□□ 0.54
COMMD4-210ENST00000564587 SLF2Q8IX21 1173 aa18.41■□□□□ 0.54
COMMD4-210ENST00000564587 LCORLQ8N3X6 602 aa18.41■□□□□ 0.54
COMMD4-210ENST00000564587 ZC3H12CQ9C0D7 883 aaKnown RBP18.41■□□□□ 0.54
COMMD4-210ENST00000564587 CNNM2Q9H8M5 875 aa18.41■□□□□ 0.54
COMMD4-210ENST00000564587 COL11A2P13942 1736 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-210ENST00000564587 TDO2P48775 406 aa18.4■□□□□ 0.54
COMMD4-210ENST00000564587 TOB2Q14106 344 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-210ENST00000564587 RIOK1Q9BRS2 568 aaKnown RBP18.4■□□□□ 0.54
COMMD4-210ENST00000564587 RNF41Q9H4P4 317 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-210ENST00000564587 SMC3Q9UQE7 1217 aa18.4■□□□□ 0.54
COMMD4-210ENST00000564587 SUGT1Q9Y2Z0 365 aa18.4■□□□□ 0.54
COMMD4-210ENST00000564587 FAM205AQ6ZU69 1335 aa18.4■□□□□ 0.54
COMMD4-210ENST00000564587 NBR1Q14596 966 aa18.39■□□□□ 0.53
COMMD4-210ENST00000564587 IFFO2Q5TF58 517 aa18.39■□□□□ 0.53
COMMD4-210ENST00000564587 CLEC17AQ6ZS10 378 aa18.39■□□□□ 0.53
COMMD4-210ENST00000564587 MIGA1Q8NAN2 632 aa18.39■□□□□ 0.53
COMMD4-210ENST00000564587 NOL10Q9BSC4 688 aaKnown RBP18.39■□□□□ 0.53
COMMD4-210ENST00000564587 CRNKL1Q9BZJ0 848 aaKnown RBP18.39■□□□□ 0.53
COMMD4-210ENST00000564587 TPCN1Q9ULQ1 816 aa18.39■□□□□ 0.53
COMMD4-210ENST00000564587 BAG3O95817 575 aa18.38■□□□□ 0.53
COMMD4-210ENST00000564587 PCP11498 1178 aaKnown RBP18.38■□□□□ 0.53
COMMD4-210ENST00000564587 NT5C2P49902 561 aa18.38■□□□□ 0.53
COMMD4-210ENST00000564587 HAND2P61296 217 aa18.38■□□□□ 0.53
COMMD4-210ENST00000564587 ME3Q16798 604 aa18.38■□□□□ 0.53
COMMD4-210ENST00000564587 TNPO1Q92973 898 aaKnown RBP18.38■□□□□ 0.53
COMMD4-210ENST00000564587 MTA3Q9BTC8 594 aa18.38■□□□□ 0.53
COMMD4-210ENST00000564587 KRT23Q9C075 422 aa18.38■□□□□ 0.53
COMMD4-210ENST00000564587 PPP1R1BQ9UD71 204 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-210ENST00000564587 DDX11L8A8MPP1 907 aa18.37■□□□□ 0.53
COMMD4-210ENST00000564587 PRDX5P30044 214 aa18.37■□□□□ 0.53
COMMD4-210ENST00000564587 MB21D2Q8IYB1 491 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-210ENST00000564587 SUPT20HQ8NEM7 779 aa18.37■□□□□ 0.53
COMMD4-210ENST00000564587 ZNF274Q96GC6 653 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms