RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 LRRC7Q96NW7 1537 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 CD33P20138 364 aa10.78□□□□□ -0.68
SMG1-209ENST00000563836 PHLDB3Q6NSJ2 640 aa10.78□□□□□ -0.68
SMG1-209ENST00000563836 KCNH5Q8NCM2 988 aa10.78□□□□□ -0.68
SMG1-209ENST00000563836 MARK1Q9P0L2 795 aa10.78□□□□□ -0.68
SMG1-209ENST00000563836 NRKQ7Z2Y5 1582 aa10.77□□□□□ -0.68
SMG1-209ENST00000563836 BMP4P12644 408 aa10.77□□□□□ -0.69
SMG1-209ENST00000563836 KCNQ4P56696 695 aa10.77□□□□□ -0.69
SMG1-209ENST00000563836 PDE4CQ08493 712 aa10.77□□□□□ -0.69
SMG1-209ENST00000563836 KRT28Q7Z3Y7 464 aa10.77□□□□□ -0.69
SMG1-209ENST00000563836 BRD7Q9NPI1 651 aa10.77□□□□□ -0.69
SMG1-209ENST00000563836 INSRP06213 1382 aa10.77□□□□□ -0.69
SMG1-209ENST00000563836 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.69
SMG1-209ENST00000563836 DIAPH1O60610 1272 aaKnown RBP10.76□□□□□ -0.69
SMG1-209ENST00000563836 AMPHP49418 695 aa10.76□□□□□ -0.69
SMG1-209ENST00000563836 NAA30Q147X3 362 aaPredicted RBP10.76□□□□□ -0.69
SMG1-209ENST00000563836 CCDC184Q52MB2 194 aa10.76□□□□□ -0.69
SMG1-209ENST00000563836 ORAI2Q96SN7 254 aa10.76□□□□□ -0.69
SMG1-209ENST00000563836 MST1RQ04912 1400 aa10.75□□□□□ -0.69
SMG1-209ENST00000563836 XIRP1Q702N8 1843 aaKnown RBP10.75□□□□□ -0.69
SMG1-209ENST00000563836 U2SURPO15042 1029 aaKnown RBP10.75□□□□□ -0.69
SMG1-209ENST00000563836 SFSWAPQ12872 951 aaKnown RBP10.75□□□□□ -0.69
SMG1-209ENST00000563836 NGEFQ8N5V2 710 aa10.75□□□□□ -0.69
SMG1-209ENST00000563836 ACDQ96AP0 544 aa10.75□□□□□ -0.69
SMG1-209ENST00000563836 IFT43Q96FT9 208 aa10.75□□□□□ -0.69
SMG1-209ENST00000563836 SEPT3Q9UH03 358 aa10.75□□□□□ -0.69
SMG1-209ENST00000563836 MAPK8IP3Q9UPT6 1336 aa10.75□□□□□ -0.69
SMG1-209ENST00000563836 USP31Q70CQ4 1352 aa10.75□□□□□ -0.69
SMG1-209ENST00000563836 U2AF1L5P0DN76 240 aaPredicted RBP10.74□□□□□ -0.69
SMG1-209ENST00000563836 SCNN1AP37088 669 aa10.74□□□□□ -0.69
SMG1-209ENST00000563836 U2AF1Q01081 240 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMG1-209ENST00000563836 ZNF385CQ66K41 422 aaPredicted RBP10.74□□□□□ -0.69
SMG1-209ENST00000563836 WHAMMQ8TF30 809 aa10.74□□□□□ -0.69
SMG1-209ENST00000563836 TNFRSF10BO14763 440 aa10.73□□□□□ -0.69
SMG1-209ENST00000563836 TOM1O60784 492 aa10.73□□□□□ -0.69
SMG1-209ENST00000563836 MICAL2O94851 1124 aa10.73□□□□□ -0.69
SMG1-209ENST00000563836 INPP5BP32019 993 aa10.73□□□□□ -0.69
SMG1-209ENST00000563836 LYPD4Q6UWN0 246 aa10.73□□□□□ -0.69
SMG1-209ENST00000563836 OXCT2Q9BYC2 517 aaPredicted RBP10.73□□□□□ -0.69
SMG1-209ENST00000563836 KCNH4Q9UQ05 1017 aa10.73□□□□□ -0.69
SMG1-209ENST00000563836 ZBED9Q6R2W3 1325 aa10.73□□□□□ -0.69
SMG1-209ENST00000563836 CELA2BP08218 269 aaPredicted RBP10.72□□□□□ -0.69
SMG1-209ENST00000563836 ARAFP10398 606 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 BRD2P25440 801 aaKnown RBP10.72□□□□□ -0.69
SMG1-209ENST00000563836 IDH3AP50213 366 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 B4GALNT3Q6L9W6 998 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 AVENQ9NQS1 362 aaPredicted RBP10.72□□□□□ -0.69
SMG1-209ENST00000563836 LRRC4BQ9NT99 713 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 ADAMTS8Q9UP79 889 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 SBNO1A3KN83 1393 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 ARHGEF10O15013 1369 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 KIF24Q5T7B8 1368 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 OVOS2A0A0J9YW53 1432 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 OVOS2Q6IE36 1432 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 SSH2Q76I76 1423 aa10.72□□□□□ -0.69
SMG1-209ENST00000563836 SMG6Q86US8 1419 aaKnown RBP10.72□□□□□ -0.69
SMG1-209ENST00000563836 CDK12Q9NYV4 1490 aaPredicted RBP10.72□□□□□ -0.69
SMG1-209ENST00000563836 ZBTB7CA1YPR0 619 aa10.71□□□□□ -0.69
SMG1-209ENST00000563836 PIK3C2AO00443 1686 aa10.71□□□□□ -0.69
SMG1-209ENST00000563836 PDE3BQ13370 1112 aa10.71□□□□□ -0.69
SMG1-209ENST00000563836 GRIN2CQ14957 1233 aa10.71□□□□□ -0.69
SMG1-209ENST00000563836 NUTM2GQ5VZR2 741 aa10.71□□□□□ -0.69
SMG1-209ENST00000563836 USP54Q70EL1 1684 aa10.71□□□□□ -0.69
SMG1-209ENST00000563836 ETFBKMTQ8IXQ9 262 aa10.71□□□□□ -0.69
SMG1-209ENST00000563836 RUNDC1Q96C34 613 aa10.71□□□□□ -0.69
SMG1-209ENST00000563836 POLKQ9UBT6 870 aa10.71□□□□□ -0.69
SMG1-209ENST00000563836 GDF2Q9UK05 429 aaPredicted RBP10.71□□□□□ -0.69
SMG1-209ENST00000563836 FLT4P35916 1363 aa10.7□□□□□ -0.7
SMG1-209ENST00000563836 ARSDP51689 593 aa10.7□□□□□ -0.7
SMG1-209ENST00000563836 XPCQ01831 940 aaPredicted RBP10.7□□□□□ -0.7
SMG1-209ENST00000563836 RRS1Q15050 365 aaKnown RBP10.7□□□□□ -0.7
SMG1-209ENST00000563836 FAM26DQ5JW98 314 aa10.7□□□□□ -0.7
SMG1-209ENST00000563836 ZNF468Q5VIY5 522 aaPredicted RBP10.7□□□□□ -0.7
SMG1-209ENST00000563836 TREML1Q86YW5 311 aa10.7□□□□□ -0.7
SMG1-209ENST00000563836 SVOPQ8N4V2 548 aa10.7□□□□□ -0.7
SMG1-209ENST00000563836 STIM2Q9P246 746 aa10.7□□□□□ -0.7
SMG1-209ENST00000563836 BLMP54132 1417 aaPredicted RBP10.69□□□□□ -0.7
SMG1-209ENST00000563836 OPLAHO14841 1288 aa10.69□□□□□ -0.7
SMG1-209ENST00000563836 BCRP11274 1271 aa10.69□□□□□ -0.7
SMG1-209ENST00000563836 EPB42P16452 691 aa10.69□□□□□ -0.7
SMG1-209ENST00000563836 GRNP28799 593 aaKnown RBP10.69□□□□□ -0.7
SMG1-209ENST00000563836 BRINP3Q76B58 766 aa10.69□□□□□ -0.7
SMG1-209ENST00000563836 GOLGA6L1Q8N7Z2 621 aa10.69□□□□□ -0.7
SMG1-209ENST00000563836 HELQQ8TDG4 1101 aa10.69□□□□□ -0.7
SMG1-209ENST00000563836 SLC30A3Q99726 388 aa10.69□□□□□ -0.7
SMG1-209ENST00000563836 STK17AQ9UEE5 414 aa10.69□□□□□ -0.7
SMG1-209ENST00000563836 PRR12Q9ULL5 1215 aa10.69□□□□□ -0.7
SMG1-209ENST00000563836 TNS3Q68CZ2 1445 aa10.68□□□□□ -0.7
SMG1-209ENST00000563836 RTL1A6NKG5 1358 aa10.68□□□□□ -0.7
SMG1-209ENST00000563836 ARHGEF15O94989 841 aa10.68□□□□□ -0.7
SMG1-209ENST00000563836 SPEM2Q0P670 501 aa10.68□□□□□ -0.7
SMG1-209ENST00000563836 C11orf16Q9NQ32 467 aa10.68□□□□□ -0.7
SMG1-209ENST00000563836 KLF15Q9UIH9 416 aa10.68□□□□□ -0.7
SMG1-209ENST00000563836 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
SMG1-209ENST00000563836 LTN1O94822 1766 aa10.67□□□□□ -0.7
SMG1-209ENST00000563836 TRPM3Q9HCF6 1732 aaPredicted RBP10.67□□□□□ -0.7
SMG1-209ENST00000563836 OIP5O43482 229 aa10.67□□□□□ -0.7
SMG1-209ENST00000563836 NEFLP07196 543 aa10.67□□□□□ -0.7
SMG1-209ENST00000563836 ADH6P28332 368 aa10.67□□□□□ -0.7
SMG1-209ENST00000563836 SLCO4C1Q6ZQN7 724 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms