RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 NOM1Q5C9Z4 860 aaKnown RBP31.39■■■□□ 2.62
SPG7-208ENST00000563783 ZNF70Q9UC06 446 aaPredicted RBP31.39■■■□□ 2.62
SPG7-208ENST00000563783 LRRFIP2Q9Y608 721 aaKnown RBP31.39■■■□□ 2.62
SPG7-208ENST00000563783 RASA3Q14644 834 aa31.38■■■□□ 2.61
SPG7-208ENST00000563783 COPRSQ9NQ92 184 aa31.38■■■□□ 2.61
SPG7-208ENST00000563783 IL15P40933 162 aaPredicted RBP31.37■■■□□ 2.61
SPG7-208ENST00000563783 CFHR5Q9BXR6 569 aa31.37■■■□□ 2.61
SPG7-208ENST00000563783 CEP126Q9P2H0 1117 aa31.37■■■□□ 2.61
SPG7-208ENST00000563783 AOX1Q06278 1338 aa31.37■■■□□ 2.61
SPG7-208ENST00000563783 ZBTB48P10074 688 aaPredicted RBP31.36■■■□□ 2.61
SPG7-208ENST00000563783 MTX1Q13505 466 aa31.36■■■□□ 2.61
SPG7-208ENST00000563783 SPRYD7Q5W111 196 aa31.36■■■□□ 2.61
SPG7-208ENST00000563783 WDR66Q8TBY9 1149 aa31.36■■■□□ 2.61
SPG7-208ENST00000563783 TEKT1Q969V4 418 aa31.36■■■□□ 2.61
SPG7-208ENST00000563783 IQSEC3Q9UPP2 1182 aaPredicted RBP31.36■■■□□ 2.61
SPG7-208ENST00000563783 IREB2P48200 963 aaKnown RBP31.35■■■□□ 2.61
SPG7-208ENST00000563783 TNNI2P48788 182 aa31.35■■■□□ 2.61
SPG7-208ENST00000563783 INHBEP58166 350 aa31.35■■■□□ 2.61
SPG7-208ENST00000563783 CHAF1AQ13111 956 aaPredicted RBP31.35■■■□□ 2.61
SPG7-208ENST00000563783 ZDHHC15Q96MV8 337 aa31.35■■■□□ 2.61
SPG7-208ENST00000563783 MEIS3Q99687 375 aa31.35■■■□□ 2.61
SPG7-208ENST00000563783 MCOLN1Q9GZU1 580 aa31.35■■■□□ 2.61
SPG7-208ENST00000563783 OTOFQ9HC10 1997 aa31.35■■■□□ 2.61
SPG7-208ENST00000563783 FKBP1CQ5VVH2 108 aa31.34■■■□□ 2.61
SPG7-208ENST00000563783 TDRD3Q9H7E2 651 aaKnown RBP31.34■■■□□ 2.61
SPG7-208ENST00000563783 PRKG1Q13976 671 aa31.33■■■□□ 2.61
SPG7-208ENST00000563783 ATP2B3Q16720 1220 aa31.33■■■□□ 2.61
SPG7-208ENST00000563783 NBPF12Q5TAG4 269 aaPredicted RBP31.33■■■□□ 2.61
SPG7-208ENST00000563783 HHIPL2Q6UWX4 724 aa31.33■■■□□ 2.61
SPG7-208ENST00000563783 ATF7IPQ6VMQ6 1270 aa31.33■■■□□ 2.61
SPG7-208ENST00000563783 SLC10A4Q96EP9 437 aa31.33■■■□□ 2.61
SPG7-208ENST00000563783 GNL3LQ9NVN8 582 aaKnown RBP31.33■■■□□ 2.61
SPG7-208ENST00000563783 SEMA3EO15041 775 aa31.32■■■□□ 2.6
SPG7-208ENST00000563783 MANSC4A6NHS7 340 aaPredicted RBP31.31■■■□□ 2.6
SPG7-208ENST00000563783 ALDH1A1P00352 501 aa31.31■■■□□ 2.6
SPG7-208ENST00000563783 TRIM27P14373 513 aa31.31■■■□□ 2.6
SPG7-208ENST00000563783 DGKZQ13574 1117 aa31.31■■■□□ 2.6
SPG7-208ENST00000563783 GRIK5Q16478 980 aa31.31■■■□□ 2.6
SPG7-208ENST00000563783 ANKRD13AQ8IZ07 590 aa31.31■■■□□ 2.6
SPG7-208ENST00000563783 TEPSINQ96N21 525 aa31.31■■■□□ 2.6
SPG7-208ENST00000563783 SIL1Q9H173 461 aa31.3■■■□□ 2.6
SPG7-208ENST00000563783 SALL1Q9NSC2 1324 aa31.29■■■□□ 2.6
SPG7-208ENST00000563783 USP2O75604 605 aaPredicted RBP31.29■■■□□ 2.6
SPG7-208ENST00000563783 DIEXFQ68CQ4 756 aaKnown RBP31.29■■■□□ 2.6
SPG7-208ENST00000563783 FAM83AQ86UY5 434 aa31.29■■■□□ 2.6
SPG7-208ENST00000563783 WNK4Q96J92 1243 aa31.28■■■□□ 2.6
SPG7-208ENST00000563783 TMOD2Q9NZR1 351 aa31.28■■■□□ 2.6
SPG7-208ENST00000563783 RPAP1Q9BWH6 1393 aaPredicted RBP31.28■■■□□ 2.6
SPG7-208ENST00000563783 PDS5AQ29RF7 1337 aaKnown RBP31.26■■■□□ 2.6
SPG7-208ENST00000563783 APOBEC3HQ6NTF7 200 aaKnown RBP31.26■■■□□ 2.59
SPG7-208ENST00000563783 CTU1Q7Z7A3 348 aaKnown RBP31.26■■■□□ 2.59
SPG7-208ENST00000563783 MIER1Q8N108 512 aa31.26■■■□□ 2.59
SPG7-208ENST00000563783 HOOK2Q96ED9 719 aa31.26■■■□□ 2.59
SPG7-208ENST00000563783 DENND2AQ9ULE3 1009 aa31.26■■■□□ 2.59
SPG7-208ENST00000563783 CLMNQ96JQ2 1002 aa31.25■■■□□ 2.59
SPG7-208ENST00000563783 FZD1Q9UP38 647 aa31.25■■■□□ 2.59
SPG7-208ENST00000563783 PA2G4Q9UQ80 394 aaKnown RBP31.25■■■□□ 2.59
SPG7-208ENST00000563783 TCP10L2B9ZVM9 353 aa31.24■■■□□ 2.59
SPG7-208ENST00000563783 SRGAP3O43295 1099 aa31.24■■■□□ 2.59
SPG7-208ENST00000563783 BCAR3O75815 825 aa31.24■■■□□ 2.59
SPG7-208ENST00000563783 AKAP2Q9Y2D5 859 aa31.24■■■□□ 2.59
SPG7-208ENST00000563783 GNAI2P04899 355 aa31.23■■■□□ 2.59
SPG7-208ENST00000563783 HNRNPUQ00839 825 aaKnown RBP eCLIP31.23■■■□□ 2.59
SPG7-208ENST00000563783 PKN2Q16513 984 aaKnown RBP31.23■■■□□ 2.59
SPG7-208ENST00000563783 TMEM39BQ9GZU3 492 aa31.23■■■□□ 2.59
SPG7-208ENST00000563783 RGS19P49795 217 aa31.22■■■□□ 2.59
SPG7-208ENST00000563783 MKRN3Q13064 507 aaKnown RBP31.22■■■□□ 2.59
SPG7-208ENST00000563783 ZKSCAN2Q63HK3 967 aa31.22■■■□□ 2.59
SPG7-208ENST00000563783 ZGPATQ8N5A5 531 aaKnown RBP31.22■■■□□ 2.59
SPG7-208ENST00000563783 CCDC85CA6NKD9 419 aa31.21■■■□□ 2.59
SPG7-208ENST00000563783 GPR25O00155 361 aa31.21■■■□□ 2.59
SPG7-208ENST00000563783 IFNL1Q8IU54 200 aa31.21■■■□□ 2.59
SPG7-208ENST00000563783 FRAT1Q92837 279 aaPredicted RBP31.21■■■□□ 2.59
SPG7-208ENST00000563783 MYH2Q9UKX2 1941 aa31.21■■■□□ 2.59
SPG7-208ENST00000563783 TBC1D8O95759 1140 aa31.2■■■□□ 2.59
SPG7-208ENST00000563783 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.2■■■□□ 2.59
SPG7-208ENST00000563783 ZNF296Q8WUU4 475 aaPredicted RBP31.2■■■□□ 2.59
SPG7-208ENST00000563783 TESPA1A2RU30 521 aaPredicted RBP31.19■■■□□ 2.58
SPG7-208ENST00000563783 LDHBP07195 334 aaKnown RBP31.19■■■□□ 2.58
SPG7-208ENST00000563783 PHKA1P46020 1223 aa31.19■■■□□ 2.58
SPG7-208ENST00000563783 CCDC102BQ68D86 513 aa31.19■■■□□ 2.58
SPG7-208ENST00000563783 OTUD7BQ6GQQ9 843 aa31.19■■■□□ 2.58
SPG7-208ENST00000563783 MAP3K9P80192 1104 aa31.18■■■□□ 2.58
SPG7-208ENST00000563783 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.18■■■□□ 2.58
SPG7-208ENST00000563783 DAGLAQ9Y4D2 1042 aa31.18■■■□□ 2.58
SPG7-208ENST00000563783 ZBED9Q6R2W3 1325 aa31.18■■■□□ 2.58
SPG7-208ENST00000563783 PRDX5P30044 214 aa31.17■■■□□ 2.58
SPG7-208ENST00000563783 MVPQ14764 893 aaKnown RBP31.17■■■□□ 2.58
SPG7-208ENST00000563783 CDAN1Q8IWY9 1227 aa31.17■■■□□ 2.58
SPG7-208ENST00000563783 GJA5P36382 358 aa31.16■■■□□ 2.58
SPG7-208ENST00000563783 CSADQ9Y600 493 aa31.16■■■□□ 2.58
SPG7-208ENST00000563783 AK9Q5TCS8 1911 aa31.16■■■□□ 2.58
SPG7-208ENST00000563783 A0A1B0GUL7 405 aa31.15■■■□□ 2.58
SPG7-208ENST00000563783 FKTNO75072 461 aa31.15■■■□□ 2.58
SPG7-208ENST00000563783 DCAF15Q66K64 600 aa31.15■■■□□ 2.58
SPG7-208ENST00000563783 CLUAP1Q96AJ1 413 aa31.15■■■□□ 2.58
SPG7-208ENST00000563783 ADORA1P30542 326 aa31.14■■■□□ 2.58
SPG7-208ENST00000563783 CACNB3P54284 484 aa31.14■■■□□ 2.58
SPG7-208ENST00000563783 VGLL4Q14135 290 aa31.14■■■□□ 2.58
SPG7-208ENST00000563783 FAM151AQ8WW52 585 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms