RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 ZFAND3Q9H8U3 227 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 DDX21Q9NR30 783 aaKnown RBP eCLIP6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 CCDC87Q9NVE4 849 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 CHPF2Q9P2E5 772 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 COL5A3P25940 1745 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 C4BP0C0L5 1744 aa6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 NUP188Q5SRE5 1749 aa6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 LAMB4A4D0S4 1761 aa6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 RPS6KA4O75676 772 aa6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 HSP90B1P14625 803 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 ADD1P35611 737 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 EIF5P55010 431 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 ERVK-9P63128 1117 aa6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 ALDH1L2Q3SY69 923 aa6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 CCDC30Q5VVM6 783 aa6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 IGSF5Q9NSI5 407 aa6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 TFIP11Q9UBB9 837 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 DOLKQ9UPQ8 538 aa6.65□□□□□ -1.34
HERPUD1-207ENST00000563781 KAT6BQ8WYB5 2073 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 AXIN1O15169 862 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 ATP9BO43861 1147 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 CANXP27824 592 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 IL6STP40189 918 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 SCTRP47872 440 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 Q6ZNB5 142 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 TTLL7Q6ZT98 887 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 Q6ZVU0 165 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 G2E3Q7L622 706 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 BCL2L13Q9BXK5 485 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 PPP1R12CQ9BZL4 782 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 PHAXQ9H814 394 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 CYLDQ9NQC7 956 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 AAASQ9NRG9 546 aa6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 DBF4Q9UBU7 674 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-207ENST00000563781 PALM3A6NDB9 673 aaPredicted RBP6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 LCE2BO14633 110 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 LZTS3O60299 673 aaPredicted RBP6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 BCAR3O75815 825 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 MYL6BP14649 208 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 SSFA2P28290 1259 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 COL15A1P39059 1388 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 USP4Q13107 963 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 CBLBQ13191 982 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 SLC15A2Q16348 729 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 CC2D2BQ6DHV5 1058 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 PNPLA7Q6ZV29 1317 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 MYH14Q7Z406 1995 aaKnown RBP6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 TAF1LQ8IZX4 1826 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 XAGE3Q8WTP9 111 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 STK31Q9BXU1 1019 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 CHMP4AQ9BY43 222 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 SMC4Q9NTJ3 1288 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 HYPKQ9NX55 129 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 RCAN3Q9UKA8 241 aa6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 GNEQ9Y223 722 aaKnown RBP6.63□□□□□ -1.35
HERPUD1-207ENST00000563781 ADCY9O60503 1353 aa6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 ST8SIA5O15466 376 aa6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 CAMTA2O94983 1202 aa6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 HMGB2P26583 209 aaKnown RBP6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 COPS6Q7L5N1 327 aa6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 COL23A1Q86Y22 540 aaPredicted RBP6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 PLEKHM2Q8IWE5 1019 aa6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 STK32BQ9NY57 414 aa6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 SRP68Q9UHB9 627 aaKnown RBP6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 TNNQ9UQP3 1299 aa6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 RTCBQ9Y3I0 505 aaKnown RBP6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 IVNS1ABPQ9Y6Y0 642 aa6.62□□□□□ -1.35
HERPUD1-207ENST00000563781 MAP3K15Q6ZN16 1313 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 USP42Q9H9J4 1324 aaKnown RBP6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 RBM47A0AV96 593 aaKnown RBP6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 USP17L5A8MUK1 530 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 AIMP1Q12904 312 aaKnown RBP6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 NCOA4Q13772 614 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 OXLD1Q5BKU9 147 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 MEIOBQ8N635 442 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 KDF1Q8NAX2 398 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 PDGFDQ9GZP0 370 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 OSBPL3Q9H4L5 887 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 TFCP2L1Q9NZI6 479 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 NARFQ9UHQ1 456 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 DACH1Q9UI36 760 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 NOB1Q9ULX3 412 aaKnown RBP6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 MAFBQ9Y5Q3 323 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 UBR3Q6ZT12 1888 aa6.61□□□□□ -1.35
HERPUD1-207ENST00000563781 TUBGCP6Q96RT7 1819 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 RNF123Q5XPI4 1314 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 KIF16BQ96L93 1317 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 A0A087WZG4 1122 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 PI4KAP2A4QPH2 592 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 USP17L3A6NCW0 530 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 USP17L4A6NCW7 530 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 ERVV-1B6SEH8 477 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 GYS1P13807 737 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 FKBP5Q13451 457 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 R3HDM1Q15032 1099 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 HLFQ16534 295 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 EML3Q32P44 896 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 TRAPPC3LQ5T215 181 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms