RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 RRP12Q5JTH9 1297 aaKnown RBP13.65□□□□□ -0.22
ABCA3-203ENST00000563623 NBPF11Q86T75 865 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 NCOA7Q8NI08 942 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 CLIC6Q96NY7 704 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 IMPACTQ9P2X3 320 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 SH3TC1Q8TE82 1336 aa13.65□□□□□ -0.22
ABCA3-203ENST00000563623 EYA2O00167 538 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 PHKG2P15735 406 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 ADORA1P30542 326 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 TERF2Q15554 542 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 ADGRL3Q9HAR2 1447 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 FGAP02671 866 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 GNG11P61952 73 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 CNNM3Q8NE01 707 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 MYL10Q9BUA6 226 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 A0A0G2JS52 829 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 PLBD2Q8NHP8 589 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 EPC1Q9H2F5 836 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
ABCA3-203ENST00000563623 CBFA2T2O43439 604 aa13.63□□□□□ -0.23
ABCA3-203ENST00000563623 PROSER2Q86WR7 435 aaPredicted RBP13.63□□□□□ -0.23
ABCA3-203ENST00000563623 JMYQ8N9B5 988 aa13.63□□□□□ -0.23
ABCA3-203ENST00000563623 KIF28PB7ZC32 967 aa13.63□□□□□ -0.23
ABCA3-203ENST00000563623 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.23
ABCA3-203ENST00000563623 A0A1W2PQ27 194 aa13.63□□□□□ -0.23
ABCA3-203ENST00000563623 A0A1W2PQ64 194 aa13.63□□□□□ -0.23
ABCA3-203ENST00000563623 A0A1W2PQD8 194 aa13.63□□□□□ -0.23
ABCA3-203ENST00000563623 YEATS4O95619 227 aa13.63□□□□□ -0.23
ABCA3-203ENST00000563623 ZAP70P43403 619 aa13.63□□□□□ -0.23
ABCA3-203ENST00000563623 DPF2Q92785 391 aa13.63□□□□□ -0.23
ABCA3-203ENST00000563623 SEC31AO94979 1220 aaKnown RBP13.62□□□□□ -0.23
ABCA3-203ENST00000563623 CLCN6P51797 869 aa13.62□□□□□ -0.23
ABCA3-203ENST00000563623 ETF1P62495 437 aaKnown RBP13.62□□□□□ -0.23
ABCA3-203ENST00000563623 BRAPQ7Z569 592 aa13.62□□□□□ -0.23
ABCA3-203ENST00000563623 CPLX3Q8WVH0 158 aa13.62□□□□□ -0.23
ABCA3-203ENST00000563623 OSBPL5Q9H0X9 879 aaPredicted RBP13.62□□□□□ -0.23
ABCA3-203ENST00000563623 CCP110O43303 1012 aa13.62□□□□□ -0.23
ABCA3-203ENST00000563623 MYL5Q02045 173 aa13.62□□□□□ -0.23
ABCA3-203ENST00000563623 KARSQ15046 597 aaKnown RBP13.62□□□□□ -0.23
ABCA3-203ENST00000563623 ATG9AQ7Z3C6 839 aa13.62□□□□□ -0.23
ABCA3-203ENST00000563623 CCDC34Q96HJ3 373 aa13.62□□□□□ -0.23
ABCA3-203ENST00000563623 FANCLQ9NW38 375 aa13.62□□□□□ -0.23
ABCA3-203ENST00000563623 TMEM232C9JQI7 657 aa13.61□□□□□ -0.23
ABCA3-203ENST00000563623 KLHL10Q6JEL2 608 aa13.61□□□□□ -0.23
ABCA3-203ENST00000563623 XAGE2Q96GT9 111 aa13.61□□□□□ -0.23
ABCA3-203ENST00000563623 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
ABCA3-203ENST00000563623 GPAA1O43292 621 aa13.61□□□□□ -0.23
ABCA3-203ENST00000563623 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
ABCA3-203ENST00000563623 EVCP57679 992 aa13.61□□□□□ -0.23
ABCA3-203ENST00000563623 RABL6Q3YEC7 729 aaPredicted RBP13.61□□□□□ -0.23
ABCA3-203ENST00000563623 METTL24Q5JXM2 366 aa13.61□□□□□ -0.23
ABCA3-203ENST00000563623 KRT40Q6A162 431 aa13.61□□□□□ -0.23
ABCA3-203ENST00000563623 VPS37DQ86XT2 251 aa13.61□□□□□ -0.23
ABCA3-203ENST00000563623 SLC26A6Q9BXS9 759 aa13.61□□□□□ -0.23
ABCA3-203ENST00000563623 B4E1Z4 1266 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 CASQ1P31415 396 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 KIF23Q02241 960 aaPredicted RBP13.6□□□□□ -0.23
ABCA3-203ENST00000563623 CCDC102BQ68D86 513 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 TRMT44Q8IYL2 757 aaKnown RBP13.6□□□□□ -0.23
ABCA3-203ENST00000563623 PUS7LQ9H0K6 701 aaKnown RBP13.6□□□□□ -0.23
ABCA3-203ENST00000563623 POLR3EQ9NVU0 708 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 DENND2AQ9ULE3 1009 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 PSDA5PKW4 1024 aaPredicted RBP13.6□□□□□ -0.23
ABCA3-203ENST00000563623 IARSP41252 1262 aaKnown RBP13.6□□□□□ -0.23
ABCA3-203ENST00000563623 ZNF827Q17R98 1081 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 ERBB3P21860 1342 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 GOLGA8AA7E2F4 631 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 ZSCAN12O43309 604 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 CMA1P23946 247 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 GPTP24298 496 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 ADKP55263 362 aaKnown RBP13.6□□□□□ -0.23
ABCA3-203ENST00000563623 FOXO4P98177 505 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 FAM89AQ96GI7 184 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 CNNM1Q9NRU3 951 aa13.6□□□□□ -0.23
ABCA3-203ENST00000563623 SCARF1Q14162 830 aa13.59□□□□□ -0.23
ABCA3-203ENST00000563623 SLC9C2Q5TAH2 1124 aa13.59□□□□□ -0.23
ABCA3-203ENST00000563623 DCAF5Q96JK2 942 aa13.59□□□□□ -0.23
ABCA3-203ENST00000563623 NCAPD2Q15021 1401 aa13.59□□□□□ -0.23
ABCA3-203ENST00000563623 SAFBQ15424 915 aaKnown RBP eCLIP13.59□□□□□ -0.23
ABCA3-203ENST00000563623 DESI2Q9BSY9 194 aa13.59□□□□□ -0.23
ABCA3-203ENST00000563623 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.59□□□□□ -0.23
ABCA3-203ENST00000563623 ZNF446Q9NWS9 450 aa13.59□□□□□ -0.23
ABCA3-203ENST00000563623 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.23
ABCA3-203ENST00000563623 CYP27B1O15528 508 aa13.58□□□□□ -0.23
ABCA3-203ENST00000563623 TMEM67Q5HYA8 995 aa13.58□□□□□ -0.23
ABCA3-203ENST00000563623 NUP133Q8WUM0 1156 aa13.58□□□□□ -0.23
ABCA3-203ENST00000563623 AKAP2Q9Y2D5 859 aa13.58□□□□□ -0.23
ABCA3-203ENST00000563623 PCDHA5Q9Y5H7 936 aa13.58□□□□□ -0.23
ABCA3-203ENST00000563623 MROH7-TTC4A0A0A0MT08 1334 aa13.58□□□□□ -0.24
ABCA3-203ENST00000563623 CDKL5O76039 1030 aa13.58□□□□□ -0.24
ABCA3-203ENST00000563623 PNMA6AP0CW24 399 aaPredicted RBP13.58□□□□□ -0.24
ABCA3-203ENST00000563623 SLC39A14Q15043 492 aa13.58□□□□□ -0.24
ABCA3-203ENST00000563623 TIGD1Q96MW7 591 aa13.58□□□□□ -0.24
ABCA3-203ENST00000563623 INCENPQ9NQS7 918 aa13.58□□□□□ -0.24
ABCA3-203ENST00000563623 HOOK1Q9UJC3 728 aaKnown RBP13.58□□□□□ -0.24
ABCA3-203ENST00000563623 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
ABCA3-203ENST00000563623 FOXN1O15353 648 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms