RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 GSTTP1A0A1W2PQM5 241 aa7.03□□□□□ -1.28
CLK3-212ENST00000563418 STX10O60499 249 aa7.03□□□□□ -1.28
CLK3-212ENST00000563418 CLTAP09496 248 aa7.03□□□□□ -1.28
CLK3-212ENST00000563418 STMN1P16949 149 aa7.03□□□□□ -1.28
CLK3-212ENST00000563418 CCDC26Q8TAB7 109 aa7.03□□□□□ -1.28
CLK3-212ENST00000563418 BCAP29Q9UHQ4 241 aa7.03□□□□□ -1.28
CLK3-212ENST00000563418 USP16Q9Y5T5 823 aa7.03□□□□□ -1.28
CLK3-212ENST00000563418 SDSP20132 328 aa7.02□□□□□ -1.28
CLK3-212ENST00000563418 YY1P25490 414 aa7.02□□□□□ -1.28
CLK3-212ENST00000563418 MATR3P43243 847 aaKnown RBP eCLIP7.02□□□□□ -1.28
CLK3-212ENST00000563418 PLEKHG2Q9H7P9 1386 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 CARMIL2Q6F5E8 1435 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 IDEP14735 1019 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 CCDC62Q6P9F0 684 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 JAKMIP2Q96AA8 810 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 MAML3Q96JK9 1138 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 FGD4Q96M96 766 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 KLHL14Q9P2G3 628 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 SCAF11Q99590 1463 aaKnown RBP7.02□□□□□ -1.29
CLK3-212ENST00000563418 GCC2Q8IWJ2 1684 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 CCDC80Q76M96 950 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 ITFG2Q969R8 447 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 DAPK1P53355 1430 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 PRPF40BQ6NWY9 871 aaKnown RBP7.02□□□□□ -1.29
CLK3-212ENST00000563418 MTHFSP49914 203 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 EPHB4P54760 987 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 CASP8Q14790 479 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 ZNF653Q96CK0 615 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 GUCA1BQ9UMX6 200 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 PPP2R2CQ9Y2T4 447 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 SAR1BQ9Y6B6 198 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 RNASELQ05823 741 aaKnown RBP7.02□□□□□ -1.29
CLK3-212ENST00000563418 BRAPQ7Z569 592 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 EID1Q9Y6B2 187 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 VIMP08670 466 aaKnown RBP7.02□□□□□ -1.29
CLK3-212ENST00000563418 TRPC3Q13507 836 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 SARM1Q6SZW1 724 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 POLE2P56282 527 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 MRPS35P82673 323 aaKnown RBP7.02□□□□□ -1.29
CLK3-212ENST00000563418 PPP2R5EQ16537 467 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 CCDC122Q5T0U0 273 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 ST13P4Q8IZP2 240 aaPredicted RBP7.02□□□□□ -1.29
CLK3-212ENST00000563418 POLKQ9UBT6 870 aa7.02□□□□□ -1.29
CLK3-212ENST00000563418 LMOD1P29536 600 aaPredicted RBP7.01□□□□□ -1.29
CLK3-212ENST00000563418 NUP160Q12769 1436 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 MFN1Q8IWA4 741 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 ZNF710Q8N1W2 664 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 IQUBQ8NA54 791 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 TANGO6Q9C0B7 1094 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 AOX1Q06278 1338 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 GMNNO75496 209 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 TMCC1O94876 653 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 FERP16591 822 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 ABCD1P33897 745 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 TUBA8Q9NY65 449 aaPredicted RBP7.01□□□□□ -1.29
CLK3-212ENST00000563418 VSIG1Q86XK7 387 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 PARD6BQ9BYG5 372 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 PCYT1AP49585 367 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 FANCCQ00597 558 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 KARSQ15046 597 aaKnown RBP7.01□□□□□ -1.29
CLK3-212ENST00000563418 YIPF3Q9GZM5 350 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 FAM135BQ49AJ0 1406 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 ZBTB16Q05516 673 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 CFAP221Q4G0U5 840 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 C3orf20Q8ND61 904 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 ZNF280CQ8ND82 737 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 TSG101Q99816 390 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 ACTN4O43707 911 aaKnown RBP7.01□□□□□ -1.29
CLK3-212ENST00000563418 AKR1B10O60218 316 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 FCHSD2O94868 740 aa7.01□□□□□ -1.29
CLK3-212ENST00000563418 SREK1Q8WXA9 508 aaKnown RBP7.01□□□□□ -1.29
CLK3-212ENST00000563418 BIN1O00499 593 aa7□□□□□ -1.29
CLK3-212ENST00000563418 PRC1O43663 620 aa7□□□□□ -1.29
CLK3-212ENST00000563418 SUN1O94901 812 aa7□□□□□ -1.29
CLK3-212ENST00000563418 RBM6P78332 1123 aaKnown RBP7□□□□□ -1.29
CLK3-212ENST00000563418 ADCY2Q08462 1091 aa7□□□□□ -1.29
CLK3-212ENST00000563418 EMBQ6PCB8 327 aa7□□□□□ -1.29
CLK3-212ENST00000563418 FAM212AQ96EL1 285 aa7□□□□□ -1.29
CLK3-212ENST00000563418 CAPZA3Q96KX2 299 aa7□□□□□ -1.29
CLK3-212ENST00000563418 THUMPD2Q9BTF0 503 aaKnown RBP7□□□□□ -1.29
CLK3-212ENST00000563418 GNL3Q9BVP2 549 aaKnown RBP eCLIP7□□□□□ -1.29
CLK3-212ENST00000563418 ATP5HO75947 161 aa7□□□□□ -1.29
CLK3-212ENST00000563418 SEC31AO94979 1220 aaKnown RBP7□□□□□ -1.29
CLK3-212ENST00000563418 DEUP1Q05D60 604 aa7□□□□□ -1.29
CLK3-212ENST00000563418 PPP1R21Q6ZMI0 780 aa7□□□□□ -1.29
CLK3-212ENST00000563418 CPLX3Q8WVH0 158 aa7□□□□□ -1.29
CLK3-212ENST00000563418 RMI1Q9H9A7 625 aa7□□□□□ -1.29
CLK3-212ENST00000563418 MEFVO15553 781 aaPredicted RBP7□□□□□ -1.29
CLK3-212ENST00000563418 RFC1P35251 1148 aaPredicted RBP7□□□□□ -1.29
CLK3-212ENST00000563418 LRMPQ12912 555 aa7□□□□□ -1.29
CLK3-212ENST00000563418 E2F5Q15329 346 aa7□□□□□ -1.29
CLK3-212ENST00000563418 UBLCP1Q8WVY7 318 aaPredicted RBP7□□□□□ -1.29
CLK3-212ENST00000563418 NAIF1Q69YI7 327 aaPredicted RBP7□□□□□ -1.29
CLK3-212ENST00000563418 ATP6V0A4Q9HBG4 840 aa7□□□□□ -1.29
CLK3-212ENST00000563418 TMEM232C9JQI7 657 aa7□□□□□ -1.29
CLK3-212ENST00000563418 SND1Q7KZF4 910 aaKnown RBP eCLIP7□□□□□ -1.29
CLK3-212ENST00000563418 EVI5LQ96CN4 794 aa7□□□□□ -1.29
CLK3-212ENST00000563418 IFT81Q8WYA0 676 aa7□□□□□ -1.29
CLK3-212ENST00000563418 CCDC42Q96M95 316 aa7□□□□□ -1.29
CLK3-212ENST00000563418 COG3Q96JB2 828 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms