RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 ZBTB48P10074 688 aaPredicted RBP21.66■■□□□ 1.06
TSC2-219ENST00000563346 TNNI2P48788 182 aa21.66■■□□□ 1.06
TSC2-219ENST00000563346 INHBEP58166 350 aa21.66■■□□□ 1.06
TSC2-219ENST00000563346 PUM3Q15397 648 aaKnown RBP21.66■■□□□ 1.06
TSC2-219ENST00000563346 WNK4Q96J92 1243 aa21.66■■□□□ 1.06
TSC2-219ENST00000563346 BCAMP50895 628 aa21.65■■□□□ 1.06
TSC2-219ENST00000563346 ANKRD13AQ8IZ07 590 aa21.65■■□□□ 1.06
TSC2-219ENST00000563346 TCP10L2B9ZVM9 353 aa21.64■■□□□ 1.05
TSC2-219ENST00000563346 EYA2O00167 538 aa21.64■■□□□ 1.05
TSC2-219ENST00000563346 USP2O75604 605 aaPredicted RBP21.64■■□□□ 1.05
TSC2-219ENST00000563346 CT47B1P0C2W7 299 aaPredicted RBP21.64■■□□□ 1.05
TSC2-219ENST00000563346 UBTFL1P0CB47 393 aaPredicted RBP21.64■■□□□ 1.05
TSC2-219ENST00000563346 PKN2Q16513 984 aaKnown RBP21.64■■□□□ 1.05
TSC2-219ENST00000563346 NOM1Q5C9Z4 860 aaKnown RBP21.64■■□□□ 1.05
TSC2-219ENST00000563346 TRMT2AQ8IZ69 625 aaKnown RBP21.64■■□□□ 1.05
TSC2-219ENST00000563346 TEKT1Q969V4 418 aa21.64■■□□□ 1.05
TSC2-219ENST00000563346 PCDH10Q9P2E7 1040 aa21.64■■□□□ 1.05
TSC2-219ENST00000563346 FKTNO75072 461 aa21.63■■□□□ 1.05
TSC2-219ENST00000563346 SLC5A1P13866 664 aa21.63■■□□□ 1.05
TSC2-219ENST00000563346 HDLBPQ00341 1268 aaKnown RBP21.63■■□□□ 1.05
TSC2-219ENST00000563346 GRIK5Q16478 980 aa21.63■■□□□ 1.05
TSC2-219ENST00000563346 IFNL1Q8IU54 200 aa21.63■■□□□ 1.05
TSC2-219ENST00000563346 CFHR5Q9BXR6 569 aa21.63■■□□□ 1.05
TSC2-219ENST00000563346 NOB1Q9ULX3 412 aaKnown RBP21.63■■□□□ 1.05
TSC2-219ENST00000563346 KIF16BQ96L93 1317 aa21.62■■□□□ 1.05
TSC2-219ENST00000563346 RFX5P48382 616 aaPredicted RBP21.62■■□□□ 1.05
TSC2-219ENST00000563346 API5Q9BZZ5 524 aaKnown RBP21.62■■□□□ 1.05
TSC2-219ENST00000563346 MAST3O60307 1309 aa21.61■■□□□ 1.05
TSC2-219ENST00000563346 FGFR2P21802 821 aa21.61■■□□□ 1.05
TSC2-219ENST00000563346 LPIN2Q92539 896 aa21.61■■□□□ 1.05
TSC2-219ENST00000563346 TMEM39BQ9GZU3 492 aa21.61■■□□□ 1.05
TSC2-219ENST00000563346 TMOD2Q9NZR1 351 aa21.61■■□□□ 1.05
TSC2-219ENST00000563346 HPS5Q9UPZ3 1129 aa21.61■■□□□ 1.05
TSC2-219ENST00000563346 HDAC5Q9UQL6 1122 aa21.61■■□□□ 1.05
TSC2-219ENST00000563346 CCER2I3L3R5 266 aa21.6■■□□□ 1.05
TSC2-219ENST00000563346 OTUD7BQ6GQQ9 843 aa21.6■■□□□ 1.05
TSC2-219ENST00000563346 SIL1Q9H173 461 aa21.6■■□□□ 1.05
TSC2-219ENST00000563346 R3HDMLQ9H3Y0 253 aa21.6■■□□□ 1.05
TSC2-219ENST00000563346 ELP3Q9H9T3 547 aa21.6■■□□□ 1.05
TSC2-219ENST00000563346 SUGT1Q9Y2Z0 365 aa21.6■■□□□ 1.05
TSC2-219ENST00000563346 CDAN1Q8IWY9 1227 aa21.59■■□□□ 1.05
TSC2-219ENST00000563346 TEPSINQ96N21 525 aa21.59■■□□□ 1.05
TSC2-219ENST00000563346 MYH13Q9UKX3 1938 aa21.59■■□□□ 1.05
TSC2-219ENST00000563346 OTOFQ9HC10 1997 aa21.58■■□□□ 1.05
TSC2-219ENST00000563346 IGF2BP3O00425 579 aaKnown RBP eCLIP21.58■■□□□ 1.05
TSC2-219ENST00000563346 CACNB3P54284 484 aa21.58■■□□□ 1.05
TSC2-219ENST00000563346 WDR66Q8TBY9 1149 aa21.58■■□□□ 1.05
TSC2-219ENST00000563346 OPTNQ96CV9 577 aa21.58■■□□□ 1.05
TSC2-219ENST00000563346 ZDHHC15Q96MV8 337 aa21.58■■□□□ 1.05
TSC2-219ENST00000563346 MRIQ9BWK5 157 aa21.58■■□□□ 1.05
TSC2-219ENST00000563346 FBXO3Q9UK99 471 aa21.58■■□□□ 1.05
TSC2-219ENST00000563346 LAMB1P07942 1786 aa21.58■■□□□ 1.04
TSC2-219ENST00000563346 GJA5P36382 358 aa21.57■■□□□ 1.04
TSC2-219ENST00000563346 FBXO46Q6PJ61 603 aaPredicted RBP21.57■■□□□ 1.04
TSC2-219ENST00000563346 ATG9AQ7Z3C6 839 aa21.57■■□□□ 1.04
TSC2-219ENST00000563346 CEP126Q9P2H0 1117 aa21.57■■□□□ 1.04
TSC2-219ENST00000563346 CSADQ9Y600 493 aa21.57■■□□□ 1.04
TSC2-219ENST00000563346 LRRFIP2Q9Y608 721 aaKnown RBP21.57■■□□□ 1.04
TSC2-219ENST00000563346 CIAO1O76071 339 aa21.56■■□□□ 1.04
TSC2-219ENST00000563346 MAP3K9P80192 1104 aa21.56■■□□□ 1.04
TSC2-219ENST00000563346 ATP2B3Q16720 1220 aa21.56■■□□□ 1.04
TSC2-219ENST00000563346 GNL3LQ9NVN8 582 aaKnown RBP21.56■■□□□ 1.04
TSC2-219ENST00000563346 APOBEC3HQ6NTF7 200 aaKnown RBP21.55■■□□□ 1.04
TSC2-219ENST00000563346 HHIPL2Q6UWX4 724 aa21.55■■□□□ 1.04
TSC2-219ENST00000563346 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.55■■□□□ 1.04
TSC2-219ENST00000563346 HOOK2Q96ED9 719 aa21.55■■□□□ 1.04
TSC2-219ENST00000563346 IL15P40933 162 aaPredicted RBP21.54■■□□□ 1.04
TSC2-219ENST00000563346 RARSP54136 660 aaKnown RBP21.54■■□□□ 1.04
TSC2-219ENST00000563346 VGLL4Q14135 290 aa21.54■■□□□ 1.04
TSC2-219ENST00000563346 FAM83AQ86UY5 434 aa21.54■■□□□ 1.04
TSC2-219ENST00000563346 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.54■■□□□ 1.04
TSC2-219ENST00000563346 TESPA1A2RU30 521 aaPredicted RBP21.53■■□□□ 1.04
TSC2-219ENST00000563346 CRHR2Q13324 411 aa21.53■■□□□ 1.04
TSC2-219ENST00000563346 PRPF38BQ5VTL8 546 aaKnown RBP21.53■■□□□ 1.04
TSC2-219ENST00000563346 FKBP1CQ5VVH2 108 aa21.53■■□□□ 1.04
TSC2-219ENST00000563346 MEIS3Q99687 375 aa21.53■■□□□ 1.04
TSC2-219ENST00000563346 TRIM17Q9Y577 477 aa21.53■■□□□ 1.04
TSC2-219ENST00000563346 CNKSR2Q8WXI2 1034 aa21.52■■□□□ 1.04
TSC2-219ENST00000563346 OTUD5Q96G74 571 aa21.52■■□□□ 1.04
TSC2-219ENST00000563346 PTPN18Q99952 460 aa21.52■■□□□ 1.04
TSC2-219ENST00000563346 PA2G4Q9UQ80 394 aaKnown RBP21.52■■□□□ 1.04
TSC2-219ENST00000563346 GTF2A2P52657 109 aa21.51■■□□□ 1.03
TSC2-219ENST00000563346 ARHGAP45Q92619 1136 aa21.51■■□□□ 1.03
TSC2-219ENST00000563346 ERO1AQ96HE7 468 aa21.51■■□□□ 1.03
TSC2-219ENST00000563346 WRNIP1Q96S55 665 aa21.51■■□□□ 1.03
TSC2-219ENST00000563346 COPRSQ9NQ92 184 aa21.51■■□□□ 1.03
TSC2-219ENST00000563346 CCL15-CCL14A0A0B4J2E2 113 aa21.5■■□□□ 1.03
TSC2-219ENST00000563346 LDHBP07195 334 aaKnown RBP21.5■■□□□ 1.03
TSC2-219ENST00000563346 GNAI3P08754 354 aa21.5■■□□□ 1.03
TSC2-219ENST00000563346 CCL15Q16663 113 aa21.5■■□□□ 1.03
TSC2-219ENST00000563346 DCAF15Q66K64 600 aa21.5■■□□□ 1.03
TSC2-219ENST00000563346 MS4A4AQ96JQ5 239 aa21.5■■□□□ 1.03
TSC2-219ENST00000563346 DENND2AQ9ULE3 1009 aa21.5■■□□□ 1.03
TSC2-219ENST00000563346 SEMA3EO15041 775 aa21.49■■□□□ 1.03
TSC2-219ENST00000563346 DIXDC1Q155Q3 683 aa21.49■■□□□ 1.03
TSC2-219ENST00000563346 INTS3Q68E01 1043 aaKnown RBP21.49■■□□□ 1.03
TSC2-219ENST00000563346 OTOP1Q7RTM1 612 aa21.49■■□□□ 1.03
TSC2-219ENST00000563346 DAGLAQ9Y4D2 1042 aa21.49■■□□□ 1.03
TSC2-219ENST00000563346 RPAP1Q9BWH6 1393 aaPredicted RBP21.48■■□□□ 1.03
TSC2-219ENST00000563346 SPDYE5A6NIY4 337 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms