RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 BCL2L13Q9BXK5 485 aa5.14□□□□□ -1.59
CHD9-207ENST00000562806 EMILIN2Q9BXX0 1053 aa5.14□□□□□ -1.59
CHD9-207ENST00000562806 CYP4F12Q9HCS2 524 aa5.14□□□□□ -1.59
CHD9-207ENST00000562806 MRS2Q9HD23 443 aa5.14□□□□□ -1.59
CHD9-207ENST00000562806 WWC3Q9ULE0 1092 aa5.14□□□□□ -1.59
CHD9-207ENST00000562806 AKAP2Q9Y2D5 859 aa5.14□□□□□ -1.59
CHD9-207ENST00000562806 SYNGAP1Q96PV0 1343 aa5.14□□□□□ -1.59
CHD9-207ENST00000562806 TM4SF5O14894 197 aa5.13□□□□□ -1.59
CHD9-207ENST00000562806 RLBP1P12271 317 aa5.13□□□□□ -1.59
CHD9-207ENST00000562806 IREB2P48200 963 aaKnown RBP5.13□□□□□ -1.59
CHD9-207ENST00000562806 NLRP12P59046 1061 aa5.13□□□□□ -1.59
CHD9-207ENST00000562806 POU4F3Q15319 338 aa5.13□□□□□ -1.59
CHD9-207ENST00000562806 NUTM2GQ5VZR2 741 aa5.13□□□□□ -1.59
CHD9-207ENST00000562806 DIEXFQ68CQ4 756 aaKnown RBP5.13□□□□□ -1.59
CHD9-207ENST00000562806 PI16Q6UXB8 463 aa5.13□□□□□ -1.59
CHD9-207ENST00000562806 Q6ZS46 218 aa5.13□□□□□ -1.59
CHD9-207ENST00000562806 SUGCTQ9HAC7 445 aa5.13□□□□□ -1.59
CHD9-207ENST00000562806 GPN3Q9UHW5 284 aaPredicted RBP5.13□□□□□ -1.59
CHD9-207ENST00000562806 SART1O43290 800 aaKnown RBP5.12□□□□□ -1.59
CHD9-207ENST00000562806 SORBS3O60504 671 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 PROCP04070 461 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 H2AFB1P0C5Y9 115 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 H2AFB2P0C5Z0 115 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 USP17L7P0C7H9 530 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 GLB1P16278 677 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 NOS3P29474 1203 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 TRIM26Q12899 539 aaPredicted RBP5.12□□□□□ -1.59
CHD9-207ENST00000562806 LRRC14Q15048 493 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 FDX2Q6P4F2 183 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 SV2BQ7L1I2 683 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 DZIP1LQ8IYY4 767 aaKnown RBP5.12□□□□□ -1.59
CHD9-207ENST00000562806 SMG8Q8ND04 991 aaKnown RBP5.12□□□□□ -1.59
CHD9-207ENST00000562806 C3orf58Q8NDZ4 430 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 FOXD4L4Q8WXT5 416 aaPredicted RBP5.12□□□□□ -1.59
CHD9-207ENST00000562806 USP26Q9BXU7 913 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 OSBPL7Q9BZF2 842 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 KRT82Q9NSB4 513 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 PARP2Q9UGN5 583 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 HIF3AQ9Y2N7 669 aa5.12□□□□□ -1.59
CHD9-207ENST00000562806 CCDC9Q9Y3X0 531 aaKnown RBP5.12□□□□□ -1.59
CHD9-207ENST00000562806 LOC100289279A0A1B0GTE1 492 aa5.11□□□□□ -1.59
CHD9-207ENST00000562806 ADAM11O75078 769 aa5.11□□□□□ -1.59
CHD9-207ENST00000562806 ITGB2P05107 769 aa5.11□□□□□ -1.59
CHD9-207ENST00000562806 SLFN14P0C7P3 912 aa5.11□□□□□ -1.59
CHD9-207ENST00000562806 NME2P22392 152 aa5.11□□□□□ -1.59
CHD9-207ENST00000562806 MAOBP27338 520 aa5.11□□□□□ -1.59
CHD9-207ENST00000562806 ST13P50502 369 aaKnown RBP5.11□□□□□ -1.59
CHD9-207ENST00000562806 KIAA1211Q6ZU35 1233 aa5.11□□□□□ -1.59
CHD9-207ENST00000562806 NECAB3Q96P71 396 aaPredicted RBP5.11□□□□□ -1.59
CHD9-207ENST00000562806 TMPRSS13Q9BYE2 586 aa5.11□□□□□ -1.59
CHD9-207ENST00000562806 KCNK4Q9NYG8 393 aa5.11□□□□□ -1.59
CHD9-207ENST00000562806 DDX3YO15523 660 aaKnown RBP5.1□□□□□ -1.59
CHD9-207ENST00000562806 DHX15O43143 795 aaKnown RBP5.1□□□□□ -1.59
CHD9-207ENST00000562806 ARNTP27540 789 aa5.1□□□□□ -1.59
CHD9-207ENST00000562806 UBASH3BQ8TF42 649 aa5.1□□□□□ -1.59
CHD9-207ENST00000562806 SETDB2Q96T68 719 aa5.1□□□□□ -1.59
CHD9-207ENST00000562806 SSBP4Q9BWG4 385 aaPredicted RBP5.1□□□□□ -1.59
CHD9-207ENST00000562806 YIPF2Q9BWQ6 316 aa5.1□□□□□ -1.59
CHD9-207ENST00000562806 NRSN2Q9GZP1 204 aa5.1□□□□□ -1.59
CHD9-207ENST00000562806 RAD18Q9NS91 495 aa5.1□□□□□ -1.59
CHD9-207ENST00000562806 CYP8B1Q9UNU6 501 aa5.1□□□□□ -1.59
CHD9-207ENST00000562806 TTF2Q9UNY4 1162 aaKnown RBP5.1□□□□□ -1.59
CHD9-207ENST00000562806 GSC2O15499 205 aa5.09□□□□□ -1.59
CHD9-207ENST00000562806 WISP1O95388 367 aa5.09□□□□□ -1.59
CHD9-207ENST00000562806 GSTP1P09211 210 aaKnown RBP5.09□□□□□ -1.59
CHD9-207ENST00000562806 FAAP100Q0VG06 881 aa5.09□□□□□ -1.59
CHD9-207ENST00000562806 SULF2Q8IWU5 870 aa5.09□□□□□ -1.59
CHD9-207ENST00000562806 C12orf50Q8NA57 414 aaPredicted RBP5.09□□□□□ -1.59
CHD9-207ENST00000562806 GIPC2Q8TF65 315 aa5.09□□□□□ -1.59
CHD9-207ENST00000562806 TP53INP1Q96A56 240 aa5.09□□□□□ -1.59
CHD9-207ENST00000562806 CRELD1Q96HD1 420 aa5.09□□□□□ -1.59
CHD9-207ENST00000562806 TRIM56Q9BRZ2 755 aaKnown RBP5.09□□□□□ -1.59
CHD9-207ENST00000562806 NOC4LQ9BVI4 516 aaKnown RBP5.09□□□□□ -1.59
CHD9-207ENST00000562806 RBM47A0AV96 593 aaKnown RBP5.08□□□□□ -1.6
CHD9-207ENST00000562806 GAS2O43903 313 aaKnown RBP5.08□□□□□ -1.6
CHD9-207ENST00000562806 ALX3O95076 343 aa5.08□□□□□ -1.6
CHD9-207ENST00000562806 LMNB1P20700 586 aa5.08□□□□□ -1.6
CHD9-207ENST00000562806 RPS26P62854 115 aaKnown RBP5.08□□□□□ -1.6
CHD9-207ENST00000562806 PDE3AQ14432 1141 aa5.08□□□□□ -1.6
CHD9-207ENST00000562806 TAF1CQ15572 869 aaPredicted RBP5.08□□□□□ -1.6
CHD9-207ENST00000562806 HGSNATQ68CP4 663 aa5.08□□□□□ -1.6
CHD9-207ENST00000562806 TPTE2Q6XPS3 522 aa5.08□□□□□ -1.6
CHD9-207ENST00000562806 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.08□□□□□ -1.6
CHD9-207ENST00000562806 AGGF1Q8N302 714 aaeCLIP5.08□□□□□ -1.6
CHD9-207ENST00000562806 FAM46AQ96IP4 442 aaKnown RBP5.08□□□□□ -1.6
CHD9-207ENST00000562806 MEGF10Q96KG7 1140 aa5.08□□□□□ -1.6
CHD9-207ENST00000562806 TPSG1Q9NRR2 321 aa5.08□□□□□ -1.6
CHD9-207ENST00000562806 VTI1BQ9UEU0 232 aa5.08□□□□□ -1.6
CHD9-207ENST00000562806 TRIM37O94972 964 aa5.07□□□□□ -1.6
CHD9-207ENST00000562806 TIAF1O95411 115 aa5.07□□□□□ -1.6
CHD9-207ENST00000562806 ZNF157P51786 506 aaPredicted RBP5.07□□□□□ -1.6
CHD9-207ENST00000562806 SOX4Q06945 474 aaPredicted RBP5.07□□□□□ -1.6
CHD9-207ENST00000562806 PWP1Q13610 501 aa5.07□□□□□ -1.6
CHD9-207ENST00000562806 DOC2BQ14184 412 aa5.07□□□□□ -1.6
CHD9-207ENST00000562806 CCDC85BQ15834 202 aaPredicted RBP5.07□□□□□ -1.6
CHD9-207ENST00000562806 CLEC10AQ8IUN9 316 aa5.07□□□□□ -1.6
CHD9-207ENST00000562806 UTP4Q969X6 686 aaKnown RBP5.07□□□□□ -1.6
CHD9-207ENST00000562806 MYRFLQ96LU7 910 aa5.07□□□□□ -1.6
CHD9-207ENST00000562806 USP31Q70CQ4 1352 aa5.06□□□□□ -1.6
CHD9-207ENST00000562806 ENC1O14682 589 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms