RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 MYL6BP14649 208 aa8.8□□□□□ -1
CFDP1-202ENST00000562602 XPCQ01831 940 aaPredicted RBP8.8□□□□□ -1
CFDP1-202ENST00000562602 TOB2Q14106 344 aaPredicted RBP8.8□□□□□ -1
CFDP1-202ENST00000562602 FOXD4L6Q3SYB3 417 aaPredicted RBP8.8□□□□□ -1
CFDP1-202ENST00000562602 DNTTIP2Q5QJE6 756 aaKnown RBP8.8□□□□□ -1
CFDP1-202ENST00000562602 FOXD4L3Q6VB84 417 aaPredicted RBP8.8□□□□□ -1
CFDP1-202ENST00000562602 TRIM67Q6ZTA4 783 aa8.8□□□□□ -1
CFDP1-202ENST00000562602 LRP10Q7Z4F1 713 aa8.8□□□□□ -1
CFDP1-202ENST00000562602 ZNF274Q96GC6 653 aaPredicted RBP8.8□□□□□ -1
CFDP1-202ENST00000562602 TEX13AQ9BXU3 409 aaPredicted RBP8.8□□□□□ -1
CFDP1-202ENST00000562602 SIL1Q9H173 461 aa8.8□□□□□ -1
CFDP1-202ENST00000562602 TNMDQ9H2S6 317 aa8.8□□□□□ -1
CFDP1-202ENST00000562602 CLSTN2Q9H4D0 955 aa8.8□□□□□ -1
CFDP1-202ENST00000562602 CWC25Q9NXE8 425 aaPredicted RBP8.8□□□□□ -1
CFDP1-202ENST00000562602 DBNLQ9UJU6 430 aaKnown RBP8.8□□□□□ -1
CFDP1-202ENST00000562602 KDM6AO15550 1401 aaPredicted RBP8.8□□□□□ -1
CFDP1-202ENST00000562602 PCDH11XQ9BZA7 1347 aa8.8□□□□□ -1
CFDP1-202ENST00000562602 PCDH11YQ9BZA8 1340 aa8.8□□□□□ -1
CFDP1-202ENST00000562602 UQCRHLA0A096LP55 91 aa8.79□□□□□ -1
CFDP1-202ENST00000562602 NRG2O14511 850 aaPredicted RBP8.79□□□□□ -1
CFDP1-202ENST00000562602 UQCRHP07919 91 aa8.79□□□□□ -1
CFDP1-202ENST00000562602 HSP90B1P14625 803 aaKnown RBP8.79□□□□□ -1
CFDP1-202ENST00000562602 CDC25BP30305 580 aa8.79□□□□□ -1
CFDP1-202ENST00000562602 GGCXP38435 758 aa8.79□□□□□ -1
CFDP1-202ENST00000562602 TYRO3Q06418 890 aa8.79□□□□□ -1
CFDP1-202ENST00000562602 TFCP2Q12800 502 aa8.79□□□□□ -1
CFDP1-202ENST00000562602 NECAB1Q8N987 351 aa8.79□□□□□ -1
CFDP1-202ENST00000562602 MYRIPQ8NFW9 859 aa8.79□□□□□ -1
CFDP1-202ENST00000562602 SMARCC2Q8TAQ2 1214 aa8.79□□□□□ -1
CFDP1-202ENST00000562602 LEO1Q8WVC0 666 aaPredicted RBP8.79□□□□□ -1
CFDP1-202ENST00000562602 WDR19Q8NEZ3 1342 aa8.79□□□□□ -1
CFDP1-202ENST00000562602 PRAMEF22A3QJZ6 481 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 S1PR4O95977 384 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 CPA1P15085 419 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 GTF2F1P35269 517 aaKnown RBP eCLIP8.78□□□□□ -1
CFDP1-202ENST00000562602 CASP7P55210 303 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 ZC3H6P61129 1189 aaKnown RBP8.78□□□□□ -1
CFDP1-202ENST00000562602 ST3GAL1Q11201 340 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 TRIM28Q13263 835 aaKnown RBP8.78□□□□□ -1
CFDP1-202ENST00000562602 SLC39A6Q13433 755 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 PUS10Q3MIT2 529 aaKnown RBP8.78□□□□□ -1
CFDP1-202ENST00000562602 ZMYM1Q5SVZ6 1142 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 ZSCAN25Q6NSZ9 544 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 GIMAP6Q6P9H5 292 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 TRAF7Q6Q0C0 670 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 Q6ZUG5 572 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 UBE3BQ7Z3V4 1068 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 TTC6Q86TZ1 520 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 SCUBE3Q8IX30 993 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 AGXT2Q9BYV1 514 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 NAT10Q9H0A0 1025 aaKnown RBP8.78□□□□□ -1
CFDP1-202ENST00000562602 PAG1Q9NWQ8 432 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 TLR7Q9NYK1 1049 aaKnown RBP8.78□□□□□ -1
CFDP1-202ENST00000562602 SCN11AQ9UI33 1791 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 TNS3Q68CZ2 1445 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 ALS2Q96Q42 1657 aa8.78□□□□□ -1
CFDP1-202ENST00000562602 EYA2O00167 538 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 RNF113AO15541 343 aaKnown RBP8.77□□□□□ -1.01
CFDP1-202ENST00000562602 RESTQ13127 1097 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 EPHA10Q5JZY3 1008 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 CCDC158Q5M9N0 1113 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 LMBR1LQ6UX01 489 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 CCDC73Q6ZRK6 1079 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 CDC37L1Q7L3B6 337 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 ZNF589Q86UQ0 364 aaPredicted RBP8.77□□□□□ -1.01
CFDP1-202ENST00000562602 TDRD7Q8NHU6 1098 aaKnown RBP8.77□□□□□ -1.01
CFDP1-202ENST00000562602 BICD2Q8TD16 824 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 DNAJC2Q99543 621 aaKnown RBP8.77□□□□□ -1.01
CFDP1-202ENST00000562602 CEP126Q9P2H0 1117 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 RCOR1Q9UKL0 485 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 USP16Q9Y5T5 823 aa8.77□□□□□ -1.01
CFDP1-202ENST00000562602 GOLGA6L19H0YKK7 550 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 SOCS7O14512 581 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 CYP27B1O15528 508 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 CYP21A2P08686 494 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 EVCP57679 992 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 FOXO4P98177 505 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 EXOSC10Q01780 885 aaKnown RBP8.76□□□□□ -1.01
CFDP1-202ENST00000562602 SARM1Q6SZW1 724 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 LIAT1Q6ZQX7 453 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 ZCRB1Q8TBF4 217 aaKnown RBP8.76□□□□□ -1.01
CFDP1-202ENST00000562602 KIAA1524Q8TCG1 905 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 BRF1Q92994 677 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 DBNDD2Q9BQY9 259 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 PLA2G12BQ9BX93 195 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 DACT1Q9NYF0 836 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 SPATA31A3Q5VYP0 1347 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 RGPD2P0DJD1 1756 aa8.76□□□□□ -1.01
CFDP1-202ENST00000562602 SPEF2Q9C093 1822 aa8.75□□□□□ -1.01
CFDP1-202ENST00000562602 MEGF6O75095 1541 aa8.75□□□□□ -1.01
CFDP1-202ENST00000562602 PARP4Q9UKK3 1724 aaKnown RBP8.75□□□□□ -1.01
CFDP1-202ENST00000562602 ZNF609O15014 1411 aa8.75□□□□□ -1.01
CFDP1-202ENST00000562602 A0A1W2PQ27 194 aa8.75□□□□□ -1.01
CFDP1-202ENST00000562602 A0A1W2PQ64 194 aa8.75□□□□□ -1.01
CFDP1-202ENST00000562602 A0A1W2PQD8 194 aa8.75□□□□□ -1.01
CFDP1-202ENST00000562602 KINO60870 393 aaKnown RBP8.75□□□□□ -1.01
CFDP1-202ENST00000562602 ADH1BP00325 375 aa8.75□□□□□ -1.01
CFDP1-202ENST00000562602 TUBB4AP04350 444 aa8.75□□□□□ -1.01
CFDP1-202ENST00000562602 IFIT1P09914 478 aaKnown RBP8.75□□□□□ -1.01
CFDP1-202ENST00000562602 SLC19A1P41440 591 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms