RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 ADAM32Q8TC27 787 aa7.47□□□□□ -1.21
CDH13-206ENST00000562601 PHAXQ9H814 394 aaKnown RBP7.47□□□□□ -1.21
CDH13-206ENST00000562601 DBF4Q9UBU7 674 aaPredicted RBP7.47□□□□□ -1.21
CDH13-206ENST00000562601 IL16Q14005 1332 aa7.47□□□□□ -1.21
CDH13-206ENST00000562601 HOXB7P09629 217 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 YY1P25490 414 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 GTF2E1P29083 439 aaPredicted RBP7.46□□□□□ -1.22
CDH13-206ENST00000562601 MCCD1P59942 119 aaPredicted RBP7.46□□□□□ -1.22
CDH13-206ENST00000562601 ST5P78524 1137 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 TWISTNBQ3B726 338 aaPredicted RBP7.46□□□□□ -1.22
CDH13-206ENST00000562601 NBPF20Q3BBV1 942 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 SUSD4Q5VX71 490 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 ZNF34Q8IZ26 560 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 CRIPAKQ8N1N5 446 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 ZNF622Q969S3 477 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDH13-206ENST00000562601 HYPKQ9NX55 129 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 PIM2Q9P1W9 311 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 COL11A2P13942 1736 aaPredicted RBP7.46□□□□□ -1.22
CDH13-206ENST00000562601 UBN2Q6ZU65 1347 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 ANKRD36CQ5JPF3 1778 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 ARFGEF2Q9Y6D5 1785 aa7.46□□□□□ -1.22
CDH13-206ENST00000562601 ATP5J2-PTCD1G3V325 749 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 H0YIN7 160 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 GRIN3BO60391 1043 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 SMCPP49901 116 aaPredicted RBP7.45□□□□□ -1.22
CDH13-206ENST00000562601 NR1H3Q13133 447 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 NNTQ13423 1086 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 DALRD3Q5D0E6 543 aaKnown RBP7.45□□□□□ -1.22
CDH13-206ENST00000562601 CCDC30Q5VVM6 783 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 TPTE2Q6XPS3 522 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 ARHGAP27Q6ZUM4 889 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 G2E3Q7L622 706 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 SYNE4Q8N205 404 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 BRIP1Q9BX63 1249 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 DLEC1Q9Y238 1755 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 ZNF521Q96K83 1311 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 ARFGEF1Q9Y6D6 1849 aa7.45□□□□□ -1.22
CDH13-206ENST00000562601 TNRC6CQ9HCJ0 1690 aaKnown RBP7.44□□□□□ -1.22
CDH13-206ENST00000562601 SLX4Q8IY92 1834 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 AXIN1O15169 862 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 RAD21O60216 631 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 VAMP4O75379 141 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 PDE6BP35913 854 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 TCIRG1Q13488 830 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 PLBD2Q8NHP8 589 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 JARID2Q92833 1246 aaPredicted RBP7.44□□□□□ -1.22
CDH13-206ENST00000562601 OCSTAMPQ9BR26 566 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 STK31Q9BXU1 1019 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 MYH16Q9H6N6 1097 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 CCDC88AQ3V6T2 1871 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 ABCC12Q96J65 1359 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 ATP10DQ9P241 1426 aa7.44□□□□□ -1.22
CDH13-206ENST00000562601 TAF1P21675 1872 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 NTSR2O95665 410 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 FBXO45P0C2W1 286 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 HCLS1P14317 486 aaPredicted RBP7.43□□□□□ -1.22
CDH13-206ENST00000562601 FSHRP23945 695 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 PPP1R42Q7Z4L9 355 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 NLRP10Q86W26 655 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 TTLL6Q8N841 843 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 HPS1Q92902 700 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 MYD88Q99836 296 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 UTP14AQ9BVJ6 771 aaKnown RBP7.43□□□□□ -1.22
CDH13-206ENST00000562601 NYXQ9GZU5 481 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 TRMT112Q9UI30 125 aaKnown RBP7.43□□□□□ -1.22
CDH13-206ENST00000562601 LAMB2P55268 1798 aa7.43□□□□□ -1.22
CDH13-206ENST00000562601 CACNA1FO60840 1977 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 PI4KAP2A4QPH2 592 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 C21orf2O43822 256 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 SRGNP10124 158 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 ABL2P42684 1182 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 DHX9Q08211 1270 aaKnown RBP7.42□□□□□ -1.22
CDH13-206ENST00000562601 SLFN5Q08AF3 891 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 WASHC4Q2M389 1173 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 HSP90AB3PQ58FF7 597 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 OLFM4Q6UX06 510 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 SLC51AQ86UW1 340 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 PI4KAP1Q8N8J0 262 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 MASTLQ96GX5 879 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 KCTD15Q96SI1 283 aaPredicted RBP7.42□□□□□ -1.22
CDH13-206ENST00000562601 GDPD2Q9HCC8 539 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 MAP3K2Q9Y2U5 619 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 PCDHB9Q9Y5E1 797 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 SBF1O95248 1867 aa7.42□□□□□ -1.22
CDH13-206ENST00000562601 E9PSI1 815 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 GPR37L1O60883 481 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 GRM5P41594 1212 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
CDH13-206ENST00000562601 RASSF7Q02833 373 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 PARP10Q53GL7 1025 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 PRPF40BQ6NWY9 871 aaKnown RBP7.41□□□□□ -1.22
CDH13-206ENST00000562601 KSR2Q6VAB6 950 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 CCDC116Q8IYX3 515 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 FAM89AQ96GI7 184 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 ISCA1Q9BUE6 129 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 AAASQ9NRG9 546 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 ADCY9O60503 1353 aa7.41□□□□□ -1.22
CDH13-206ENST00000562601 DDX60Q8IY21 1712 aaKnown RBP7.41□□□□□ -1.22
CDH13-206ENST00000562601 KLRG2A4D1S0 409 aaPredicted RBP7.4□□□□□ -1.22
CDH13-206ENST00000562601 F6X3S4 739 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms