RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 SPATA5Q8NB90 893 aa20.5■□□□□ 0.87
CLK3-207ENST00000562389 MRIQ9BWK5 157 aa20.5■□□□□ 0.87
CLK3-207ENST00000562389 SPDYE2BA6NHP3 402 aa20.49■□□□□ 0.87
CLK3-207ENST00000562389 SPDYE6P0CI01 402 aa20.49■□□□□ 0.87
CLK3-207ENST00000562389 PRDX5P30044 214 aa20.49■□□□□ 0.87
CLK3-207ENST00000562389 CRKP46108 304 aa20.49■□□□□ 0.87
CLK3-207ENST00000562389 GLIS2Q9BZE0 524 aaPredicted RBP20.49■□□□□ 0.87
CLK3-207ENST00000562389 LDHBP07195 334 aaKnown RBP20.48■□□□□ 0.87
CLK3-207ENST00000562389 IFIT2P09913 472 aaKnown RBP20.48■□□□□ 0.87
CLK3-207ENST00000562389 RBM5P52756 815 aaKnown RBP eCLIP20.48■□□□□ 0.87
CLK3-207ENST00000562389 PI16Q6UXB8 463 aa20.48■□□□□ 0.87
CLK3-207ENST00000562389 KRT26Q7Z3Y9 468 aa20.48■□□□□ 0.87
CLK3-207ENST00000562389 TEKT1Q969V4 418 aa20.48■□□□□ 0.87
CLK3-207ENST00000562389 PCDHAC2Q9Y5I4 1007 aa20.48■□□□□ 0.87
CLK3-207ENST00000562389 MAST2Q6P0Q8 1798 aa20.47■□□□□ 0.87
CLK3-207ENST00000562389 SULF1Q8IWU6 871 aa20.47■□□□□ 0.87
CLK3-207ENST00000562389 PRMT6Q96LA8 375 aaPredicted RBP20.47■□□□□ 0.87
CLK3-207ENST00000562389 MYH2Q9UKX2 1941 aa20.47■□□□□ 0.87
CLK3-207ENST00000562389 TRAF5O00463 557 aa20.46■□□□□ 0.87
CLK3-207ENST00000562389 MYO1BO43795 1136 aa20.46■□□□□ 0.87
CLK3-207ENST00000562389 SPTY2D1Q68D10 685 aaPredicted RBP20.46■□□□□ 0.87
CLK3-207ENST00000562389 HHIPL2Q6UWX4 724 aa20.46■□□□□ 0.87
CLK3-207ENST00000562389 USP48Q86UV5 1035 aa20.46■□□□□ 0.87
CLK3-207ENST00000562389 ZDHHC15Q96MV8 337 aa20.46■□□□□ 0.87
CLK3-207ENST00000562389 ADM5C9JUS6 153 aa20.45■□□□□ 0.86
CLK3-207ENST00000562389 SMARCA5O60264 1052 aaPredicted RBP20.45■□□□□ 0.86
CLK3-207ENST00000562389 IRX6P78412 446 aaPredicted RBP20.45■□□□□ 0.86
CLK3-207ENST00000562389 APOBEC3FQ8IUX4 373 aaKnown RBP20.45■□□□□ 0.86
CLK3-207ENST00000562389 ABCF2Q9UG63 623 aa20.45■□□□□ 0.86
CLK3-207ENST00000562389 DOCK2Q92608 1830 aa20.44■□□□□ 0.86
CLK3-207ENST00000562389 MYO5AQ9Y4I1 1855 aaKnown RBP20.44■□□□□ 0.86
CLK3-207ENST00000562389 FMR1Q06787 632 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLK3-207ENST00000562389 ERICH6Q7L0X2 663 aa20.44■□□□□ 0.86
CLK3-207ENST00000562389 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLK3-207ENST00000562389 GCC1Q96CN9 775 aa20.44■□□□□ 0.86
CLK3-207ENST00000562389 SNRKQ9NRH2 765 aa20.44■□□□□ 0.86
CLK3-207ENST00000562389 CREBZFQ9NS37 354 aa20.44■□□□□ 0.86
CLK3-207ENST00000562389 AOX1Q06278 1338 aa20.44■□□□□ 0.86
CLK3-207ENST00000562389 ZAP70P43403 619 aa20.43■□□□□ 0.86
CLK3-207ENST00000562389 DIXDC1Q155Q3 683 aa20.43■□□□□ 0.86
CLK3-207ENST00000562389 SPDYE2Q495Y8 402 aa20.43■□□□□ 0.86
CLK3-207ENST00000562389 DZIP1Q86YF9 867 aaKnown RBP20.43■□□□□ 0.86
CLK3-207ENST00000562389 RWDD1Q9H446 243 aaPredicted RBP20.43■□□□□ 0.86
CLK3-207ENST00000562389 CLRN2A0PK11 232 aa20.42■□□□□ 0.86
CLK3-207ENST00000562389 TMEM88BA6NKF7 163 aa20.42■□□□□ 0.86
CLK3-207ENST00000562389 IGSF3O75054 1194 aa20.42■□□□□ 0.86
CLK3-207ENST00000562389 CYP2E1P05181 493 aaPredicted RBP20.42■□□□□ 0.86
CLK3-207ENST00000562389 APOBEC3HQ6NTF7 200 aaKnown RBP20.42■□□□□ 0.86
CLK3-207ENST00000562389 TBC1D9Q6ZT07 1266 aa20.42■□□□□ 0.86
CLK3-207ENST00000562389 SLF2Q8IX21 1173 aa20.42■□□□□ 0.86
CLK3-207ENST00000562389 BCL11AQ9H165 835 aa20.42■□□□□ 0.86
CLK3-207ENST00000562389 ZNF70Q9UC06 446 aaPredicted RBP20.42■□□□□ 0.86
CLK3-207ENST00000562389 DAGLAQ9Y4D2 1042 aa20.42■□□□□ 0.86
CLK3-207ENST00000562389 TDRD3Q9H7E2 651 aaKnown RBP20.41■□□□□ 0.86
CLK3-207ENST00000562389 GAKO14976 1311 aa20.41■□□□□ 0.86
CLK3-207ENST00000562389 CELF2O95319 508 aaKnown RBP20.4■□□□□ 0.86
CLK3-207ENST00000562389 MECOMQ03112 1051 aa20.4■□□□□ 0.86
CLK3-207ENST00000562389 CST9Q5W186 159 aa20.4■□□□□ 0.86
CLK3-207ENST00000562389 DLK2Q6UY11 383 aa20.4■□□□□ 0.86
CLK3-207ENST00000562389 NSUN4Q96CB9 384 aaKnown RBP20.4■□□□□ 0.86
CLK3-207ENST00000562389 CDCA5Q96FF9 252 aa20.4■□□□□ 0.86
CLK3-207ENST00000562389 FAM163AQ96GL9 167 aaPredicted RBP20.4■□□□□ 0.86
CLK3-207ENST00000562389 VEZTQ9HBM0 779 aa20.4■□□□□ 0.86
CLK3-207ENST00000562389 LRP2BPQ9P2M1 347 aa20.4■□□□□ 0.86
CLK3-207ENST00000562389 SCAF8Q9UPN6 1271 aaKnown RBP20.4■□□□□ 0.86
CLK3-207ENST00000562389 PPP2R3BQ9Y5P8 575 aa20.4■□□□□ 0.86
CLK3-207ENST00000562389 MROH7-TTC4A0A0A0MT08 1334 aa20.39■□□□□ 0.85
CLK3-207ENST00000562389 ATP5JP18859 108 aa20.39■□□□□ 0.85
CLK3-207ENST00000562389 GSTO1P78417 241 aa20.39■□□□□ 0.85
CLK3-207ENST00000562389 TNFAIP1Q13829 316 aa20.39■□□□□ 0.85
CLK3-207ENST00000562389 SMC5Q8IY18 1101 aa20.39■□□□□ 0.85
CLK3-207ENST00000562389 ZNF384Q8TF68 577 aa20.39■□□□□ 0.85
CLK3-207ENST00000562389 RAI14Q9P0K7 980 aa20.39■□□□□ 0.85
CLK3-207ENST00000562389 IGHDP01880 384 aa20.38■□□□□ 0.85
CLK3-207ENST00000562389 HTRA3P83110 453 aa20.38■□□□□ 0.85
CLK3-207ENST00000562389 ZNF408Q9H9D4 720 aa20.38■□□□□ 0.85
CLK3-207ENST00000562389 PIH1D3Q9NQM4 214 aaKnown RBP20.38■□□□□ 0.85
CLK3-207ENST00000562389 NDUFB9Q9Y6M9 179 aa20.38■□□□□ 0.85
CLK3-207ENST00000562389 PAPPA2Q9BXP8 1791 aa20.37■□□□□ 0.85
CLK3-207ENST00000562389 LDHCP07864 332 aa20.37■□□□□ 0.85
CLK3-207ENST00000562389 TTF1Q15361 905 aaPredicted RBP20.37■□□□□ 0.85
CLK3-207ENST00000562389 ANKRD45Q5TZF3 282 aa20.37■□□□□ 0.85
CLK3-207ENST00000562389 GPATCH3Q96I76 525 aa20.37■□□□□ 0.85
CLK3-207ENST00000562389 DEFB129Q9H1M3 183 aa20.37■□□□□ 0.85
CLK3-207ENST00000562389 ECHDC1Q9NTX5 307 aa20.37■□□□□ 0.85
CLK3-207ENST00000562389 TMOD2Q9NZR1 351 aa20.37■□□□□ 0.85
CLK3-207ENST00000562389 ZBTB47Q9UFB7 747 aaPredicted RBP20.37■□□□□ 0.85
CLK3-207ENST00000562389 FKBP1CQ5VVH2 108 aa20.36■□□□□ 0.85
CLK3-207ENST00000562389 BOLA2Q9H3K6 86 aa20.36■□□□□ 0.85
CLK3-207ENST00000562389 ANTXR1Q9H6X2 564 aa20.36■□□□□ 0.85
CLK3-207ENST00000562389 TLL2Q9Y6L7 1015 aa20.36■□□□□ 0.85
CLK3-207ENST00000562389 GPR75-ASB3A0A0A6YYF3 556 aa20.35■□□□□ 0.85
CLK3-207ENST00000562389 TNNI2P48788 182 aa20.35■□□□□ 0.85
CLK3-207ENST00000562389 RASA3Q14644 834 aa20.35■□□□□ 0.85
CLK3-207ENST00000562389 CDC42EP5Q6NZY7 148 aa20.35■□□□□ 0.85
CLK3-207ENST00000562389 DNAJC2Q99543 621 aaKnown RBP20.35■□□□□ 0.85
CLK3-207ENST00000562389 HAUS7Q99871 368 aa20.35■□□□□ 0.85
CLK3-207ENST00000562389 GBA2Q9HCG7 927 aaPredicted RBP20.35■□□□□ 0.85
CLK3-207ENST00000562389 TTC41PQ6P2S7 1318 aa20.34■□□□□ 0.85
CLK3-207ENST00000562389 MYH7P12883 1935 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms