RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 BCAMP50895 628 aa11.92□□□□□ -0.5
NIP7-203ENST00000562131 PTPN12Q05209 780 aaKnown RBP11.92□□□□□ -0.5
NIP7-203ENST00000562131 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
NIP7-203ENST00000562131 VGLL2Q8N8G2 317 aa11.92□□□□□ -0.5
NIP7-203ENST00000562131 SIL1Q9H173 461 aa11.92□□□□□ -0.5
NIP7-203ENST00000562131 ANGEL1Q9UNK9 670 aaKnown RBP11.92□□□□□ -0.5
NIP7-203ENST00000562131 LRRFIP2Q9Y608 721 aaKnown RBP11.92□□□□□ -0.5
NIP7-203ENST00000562131 IFIT1P09914 478 aaKnown RBP11.91□□□□□ -0.5
NIP7-203ENST00000562131 PUM3Q15397 648 aaKnown RBP11.91□□□□□ -0.5
NIP7-203ENST00000562131 GRIK5Q16478 980 aa11.91□□□□□ -0.5
NIP7-203ENST00000562131 ABHD8Q96I13 439 aa11.91□□□□□ -0.5
NIP7-203ENST00000562131 TDRD3Q9H7E2 651 aaKnown RBP11.91□□□□□ -0.5
NIP7-203ENST00000562131 PAPPA2Q9BXP8 1791 aa11.91□□□□□ -0.5
NIP7-203ENST00000562131 FGFR2P21802 821 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 CRKP46108 304 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 RASA3Q14644 834 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 SUPT20HL1Q3ZLR7 823 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 ATG9AQ7Z3C6 839 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 REM2Q8IYK8 340 aaPredicted RBP11.9□□□□□ -0.5
NIP7-203ENST00000562131 MEIS3Q99687 375 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 SAGE1Q9NXZ1 904 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 ZNF70Q9UC06 446 aaPredicted RBP11.9□□□□□ -0.5
NIP7-203ENST00000562131 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 HDAC5Q9UQL6 1122 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 PPP2R3BQ9Y5P8 575 aa11.9□□□□□ -0.5
NIP7-203ENST00000562131 CCDC85CA6NKD9 419 aa11.89□□□□□ -0.51
NIP7-203ENST00000562131 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
NIP7-203ENST00000562131 SLC5A1P13866 664 aa11.89□□□□□ -0.51
NIP7-203ENST00000562131 DGKZQ13574 1117 aa11.89□□□□□ -0.51
NIP7-203ENST00000562131 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
NIP7-203ENST00000562131 LDLRAD1Q5T700 205 aa11.89□□□□□ -0.51
NIP7-203ENST00000562131 NBPF12Q5TAG4 269 aaPredicted RBP11.89□□□□□ -0.51
NIP7-203ENST00000562131 TBC1D22AQ8WUA7 517 aa11.89□□□□□ -0.51
NIP7-203ENST00000562131 LPIN2Q92539 896 aa11.89□□□□□ -0.51
NIP7-203ENST00000562131 SLC10A4Q96EP9 437 aa11.89□□□□□ -0.51
NIP7-203ENST00000562131 CEP126Q9P2H0 1117 aa11.89□□□□□ -0.51
NIP7-203ENST00000562131 PA2G4Q9UQ80 394 aaKnown RBP11.89□□□□□ -0.51
NIP7-203ENST00000562131 TCP10L2B9ZVM9 353 aa11.88□□□□□ -0.51
NIP7-203ENST00000562131 GNAI3P08754 354 aa11.88□□□□□ -0.51
NIP7-203ENST00000562131 MCOLN1Q9GZU1 580 aa11.88□□□□□ -0.51
NIP7-203ENST00000562131 COL1A1P02452 1464 aaPredicted RBP11.88□□□□□ -0.51
NIP7-203ENST00000562131 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
NIP7-203ENST00000562131 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
NIP7-203ENST00000562131 CIAO1O76071 339 aa11.87□□□□□ -0.51
NIP7-203ENST00000562131 TBC1D8O95759 1140 aa11.87□□□□□ -0.51
NIP7-203ENST00000562131 TNFAIP1Q13829 316 aa11.87□□□□□ -0.51
NIP7-203ENST00000562131 ATP2B3Q16720 1220 aa11.87□□□□□ -0.51
NIP7-203ENST00000562131 TEKT1Q969V4 418 aa11.87□□□□□ -0.51
NIP7-203ENST00000562131 CLMNQ96JQ2 1002 aa11.87□□□□□ -0.51
NIP7-203ENST00000562131 ZBTB40Q9NUA8 1239 aa11.87□□□□□ -0.51
NIP7-203ENST00000562131 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
NIP7-203ENST00000562131 SRGAP3O43295 1099 aa11.86□□□□□ -0.51
NIP7-203ENST00000562131 USP2O75604 605 aaPredicted RBP11.86□□□□□ -0.51
NIP7-203ENST00000562131 IL15P40933 162 aaPredicted RBP11.86□□□□□ -0.51
NIP7-203ENST00000562131 IREB2P48200 963 aaKnown RBP11.86□□□□□ -0.51
NIP7-203ENST00000562131 TM4SF4P48230 202 aa11.86□□□□□ -0.51
NIP7-203ENST00000562131 TNNI2P48788 182 aa11.86□□□□□ -0.51
NIP7-203ENST00000562131 CACNB3P54284 484 aa11.86□□□□□ -0.51
NIP7-203ENST00000562131 MAP3K11Q16584 847 aa11.86□□□□□ -0.51
NIP7-203ENST00000562131 SPRYD7Q5W111 196 aa11.86□□□□□ -0.51
NIP7-203ENST00000562131 COPRSQ9NQ92 184 aa11.86□□□□□ -0.51
NIP7-203ENST00000562131 GNL3LQ9NVN8 582 aaKnown RBP11.86□□□□□ -0.51
NIP7-203ENST00000562131 SSC5DA1L4H1 1573 aa11.85□□□□□ -0.51
NIP7-203ENST00000562131 HDLBPQ00341 1268 aaKnown RBP11.85□□□□□ -0.51
NIP7-203ENST00000562131 SREBF2Q12772 1141 aa11.85□□□□□ -0.51
NIP7-203ENST00000562131 CDAN1Q8IWY9 1227 aa11.85□□□□□ -0.51
NIP7-203ENST00000562131 WDR66Q8TBY9 1149 aa11.85□□□□□ -0.51
NIP7-203ENST00000562131 MRIQ9BWK5 157 aa11.85□□□□□ -0.51
NIP7-203ENST00000562131 TMEM39BQ9GZU3 492 aa11.85□□□□□ -0.51
NIP7-203ENST00000562131 C1orf115Q9H7X2 142 aa11.85□□□□□ -0.51
NIP7-203ENST00000562131 AKAP11Q9UKA4 1901 aa11.84□□□□□ -0.51
NIP7-203ENST00000562131 GNAI2P04899 355 aa11.84□□□□□ -0.51
NIP7-203ENST00000562131 ADORA1P30542 326 aa11.84□□□□□ -0.51
NIP7-203ENST00000562131 PHKA1P46020 1223 aa11.84□□□□□ -0.51
NIP7-203ENST00000562131 TIMM10P62072 90 aa11.84□□□□□ -0.51
NIP7-203ENST00000562131 APOBEC3HQ6NTF7 200 aaKnown RBP11.84□□□□□ -0.51
NIP7-203ENST00000562131 CENPQQ7L2Z9 268 aaPredicted RBP11.84□□□□□ -0.51
NIP7-203ENST00000562131 WNK4Q96J92 1243 aa11.84□□□□□ -0.51
NIP7-203ENST00000562131 ZDHHC15Q96MV8 337 aa11.84□□□□□ -0.51
NIP7-203ENST00000562131 TEPSINQ96N21 525 aa11.84□□□□□ -0.51
NIP7-203ENST00000562131 SUGT1Q9Y2Z0 365 aa11.84□□□□□ -0.51
NIP7-203ENST00000562131 MAST3O60307 1309 aa11.84□□□□□ -0.51
NIP7-203ENST00000562131 ECM29Q5VYK3 1845 aa11.83□□□□□ -0.51
NIP7-203ENST00000562131 MANSC4A6NHS7 340 aaPredicted RBP11.83□□□□□ -0.52
NIP7-203ENST00000562131 TFCP2Q12800 502 aa11.83□□□□□ -0.52
NIP7-203ENST00000562131 HHIPL2Q6UWX4 724 aa11.83□□□□□ -0.52
NIP7-203ENST00000562131 ANKRD13AQ8IZ07 590 aa11.83□□□□□ -0.52
NIP7-203ENST00000562131 RWDD1Q9H446 243 aaPredicted RBP11.83□□□□□ -0.52
NIP7-203ENST00000562131 ELP3Q9H9T3 547 aa11.83□□□□□ -0.52
NIP7-203ENST00000562131 TMOD2Q9NZR1 351 aa11.83□□□□□ -0.52
NIP7-203ENST00000562131 DENND2AQ9ULE3 1009 aa11.83□□□□□ -0.52
NIP7-203ENST00000562131 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
NIP7-203ENST00000562131 UNCXA6NJT0 531 aa11.82□□□□□ -0.52
NIP7-203ENST00000562131 LDHBP07195 334 aaKnown RBP11.82□□□□□ -0.52
NIP7-203ENST00000562131 ZBTB48P10074 688 aaPredicted RBP11.82□□□□□ -0.52
NIP7-203ENST00000562131 PRDX5P30044 214 aa11.82□□□□□ -0.52
NIP7-203ENST00000562131 INHBEP58166 350 aa11.82□□□□□ -0.52
NIP7-203ENST00000562131 DIXDC1Q155Q3 683 aa11.82□□□□□ -0.52
NIP7-203ENST00000562131 CCDC102BQ68D86 513 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms