RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 PAG1Q9NWQ8 432 aa13.8□□□□□ -0.2
PCAT1-202ENST00000561978 RPAP1Q9BWH6 1393 aaPredicted RBP13.8□□□□□ -0.2
PCAT1-202ENST00000561978 LRRC24Q50LG9 513 aa13.8□□□□□ -0.2
PCAT1-202ENST00000561978 CCDC158Q5M9N0 1113 aa13.8□□□□□ -0.2
PCAT1-202ENST00000561978 ATP6V1DQ9Y5K8 247 aa13.8□□□□□ -0.2
PCAT1-202ENST00000561978 FER1L6Q2WGJ9 1857 aa13.79□□□□□ -0.2
PCAT1-202ENST00000561978 CCDC88AQ3V6T2 1871 aa13.79□□□□□ -0.2
PCAT1-202ENST00000561978 CHD4Q14839 1912 aa13.79□□□□□ -0.2
PCAT1-202ENST00000561978 A0A1B0GUL7 405 aa13.79□□□□□ -0.2
PCAT1-202ENST00000561978 NFKBIEO00221 500 aa13.79□□□□□ -0.2
PCAT1-202ENST00000561978 NCLP19338 710 aaKnown RBP13.79□□□□□ -0.2
PCAT1-202ENST00000561978 CCDC93Q567U6 631 aa13.79□□□□□ -0.2
PCAT1-202ENST00000561978 ANKRD18AQ8IVF6 992 aa13.79□□□□□ -0.2
PCAT1-202ENST00000561978 EDC3Q96F86 508 aaKnown RBP13.79□□□□□ -0.2
PCAT1-202ENST00000561978 ZNF594Q96JF6 807 aaPredicted RBP13.79□□□□□ -0.2
PCAT1-202ENST00000561978 ATP6V0A2Q9Y487 856 aa13.79□□□□□ -0.2
PCAT1-202ENST00000561978 IFIT1P09914 478 aaKnown RBP13.78□□□□□ -0.2
PCAT1-202ENST00000561978 RPS6KB1P23443 525 aa13.78□□□□□ -0.2
PCAT1-202ENST00000561978 ZNF589Q86UQ0 364 aaPredicted RBP13.78□□□□□ -0.2
PCAT1-202ENST00000561978 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
PCAT1-202ENST00000561978 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
PCAT1-202ENST00000561978 BCCIPQ9P287 314 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCAT1-202ENST00000561978 ZNF609O15014 1411 aa13.78□□□□□ -0.2
PCAT1-202ENST00000561978 ANKRD18BA2A2Z9 1011 aa13.78□□□□□ -0.2
PCAT1-202ENST00000561978 PRELPP51888 382 aa13.78□□□□□ -0.2
PCAT1-202ENST00000561978 ZNF445P59923 1031 aa13.78□□□□□ -0.2
PCAT1-202ENST00000561978 GORABQ5T7V8 394 aa13.78□□□□□ -0.2
PCAT1-202ENST00000561978 TMX4Q9H1E5 349 aaPredicted RBP13.78□□□□□ -0.2
PCAT1-202ENST00000561978 SBF1O95248 1867 aa13.78□□□□□ -0.2
PCAT1-202ENST00000561978 RTL9Q8NET4 1388 aa13.77□□□□□ -0.2
PCAT1-202ENST00000561978 GOLIM4O00461 696 aa13.77□□□□□ -0.21
PCAT1-202ENST00000561978 STX6O43752 255 aa13.77□□□□□ -0.21
PCAT1-202ENST00000561978 HMGB1P09429 215 aaKnown RBP13.77□□□□□ -0.21
PCAT1-202ENST00000561978 ZSCAN22P10073 491 aaPredicted RBP13.77□□□□□ -0.21
PCAT1-202ENST00000561978 CPA1P15085 419 aa13.77□□□□□ -0.21
PCAT1-202ENST00000561978 SOGA3Q5TF21 947 aa13.77□□□□□ -0.21
PCAT1-202ENST00000561978 SP8Q8IXZ3 490 aa13.77□□□□□ -0.21
PCAT1-202ENST00000561978 TAOK3Q9H2K8 898 aa13.77□□□□□ -0.21
PCAT1-202ENST00000561978 NSFL1CQ9UNZ2 370 aaKnown RBP13.77□□□□□ -0.21
PCAT1-202ENST00000561978 SNED1Q8TER0 1413 aa13.76□□□□□ -0.21
PCAT1-202ENST00000561978 IGHMBP2P38935 993 aaKnown RBP13.76□□□□□ -0.21
PCAT1-202ENST00000561978 FOXD4L5Q5VV16 416 aaPredicted RBP13.76□□□□□ -0.21
PCAT1-202ENST00000561978 FOXD4L4Q8WXT5 416 aaPredicted RBP13.76□□□□□ -0.21
PCAT1-202ENST00000561978 MPHOSPH8Q99549 860 aa13.76□□□□□ -0.21
PCAT1-202ENST00000561978 DSCC1Q9BVC3 393 aa13.76□□□□□ -0.21
PCAT1-202ENST00000561978 PUS3Q9BZE2 481 aaKnown RBP13.76□□□□□ -0.21
PCAT1-202ENST00000561978 ZNF277Q9NRM2 450 aaPredicted RBP13.76□□□□□ -0.21
PCAT1-202ENST00000561978 ZFYP08048 801 aaPredicted RBP13.76□□□□□ -0.21
PCAT1-202ENST00000561978 TTC39AQ5SRH9 613 aa13.76□□□□□ -0.21
PCAT1-202ENST00000561978 CAVIN1Q6NZI2 390 aaKnown RBP13.76□□□□□ -0.21
PCAT1-202ENST00000561978 DPP8Q6V1X1 898 aaPredicted RBP13.76□□□□□ -0.21
PCAT1-202ENST00000561978 CCDC83Q8IWF9 413 aa13.76□□□□□ -0.21
PCAT1-202ENST00000561978 RTKN2Q8IZC4 609 aa13.76□□□□□ -0.21
PCAT1-202ENST00000561978 NAP1L5Q96NT1 182 aaPredicted RBP13.76□□□□□ -0.21
PCAT1-202ENST00000561978 NEK1Q96PY6 1258 aa13.76□□□□□ -0.21
PCAT1-202ENST00000561978 BSDC1Q9NW68 430 aaPredicted RBP13.76□□□□□ -0.21
PCAT1-202ENST00000561978 LRRC37AA6NMS7 1700 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 RNF113AO15541 343 aaKnown RBP13.75□□□□□ -0.21
PCAT1-202ENST00000561978 PDCP20941 246 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 SYT1P21579 422 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 GJB2P29033 226 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 ME3Q16798 604 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 CSPP1Q1MSJ5 1256 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 TMEM132AQ24JP5 1023 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 MPNDQ8N594 471 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 SYAP1Q96A49 352 aaPredicted RBP13.75□□□□□ -0.21
PCAT1-202ENST00000561978 ANKIB1Q9P2G1 1089 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 MINPP1Q9UNW1 487 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 NDUFB9Q9Y6M9 179 aa13.75□□□□□ -0.21
PCAT1-202ENST00000561978 WTIPA6NIX2 430 aaPredicted RBP13.74□□□□□ -0.21
PCAT1-202ENST00000561978 GPSM2P81274 684 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 FKBP4Q02790 459 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCAT1-202ENST00000561978 ZSCAN23Q3MJ62 389 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 CC2D2BQ6DHV5 1058 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 LDHAL6AQ6ZMR3 332 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 PAXIP1Q6ZW49 1069 aaPredicted RBP13.74□□□□□ -0.21
PCAT1-202ENST00000561978 TMC4Q7Z404 712 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 GPT2Q8TD30 523 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 XAGE2Q96GT9 111 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 C9orf131Q5VYM1 1079 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 GAS2L3Q86XJ1 694 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 GPR101Q96P66 508 aaPredicted RBP13.74□□□□□ -0.21
PCAT1-202ENST00000561978 LARP6Q9BRS8 491 aaKnown RBP13.74□□□□□ -0.21
PCAT1-202ENST00000561978 RNF181Q9P0P0 153 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
PCAT1-202ENST00000561978 TPCN1Q9ULQ1 816 aa13.74□□□□□ -0.21
PCAT1-202ENST00000561978 LARGE1O95461 756 aa13.73□□□□□ -0.21
PCAT1-202ENST00000561978 LMNB1P20700 586 aa13.73□□□□□ -0.21
PCAT1-202ENST00000561978 METTL24Q5JXM2 366 aa13.73□□□□□ -0.21
PCAT1-202ENST00000561978 TMEM87AQ8NBN3 555 aa13.73□□□□□ -0.21
PCAT1-202ENST00000561978 HELBQ8NG08 1087 aaPredicted RBP13.73□□□□□ -0.21
PCAT1-202ENST00000561978 ANP32BQ92688 251 aaKnown RBP13.73□□□□□ -0.21
PCAT1-202ENST00000561978 PSMD1Q99460 953 aa13.73□□□□□ -0.21
PCAT1-202ENST00000561978 CNNM1Q9NRU3 951 aa13.73□□□□□ -0.21
PCAT1-202ENST00000561978 POLLQ9UGP5 575 aa13.73□□□□□ -0.21
PCAT1-202ENST00000561978 RIPOR2Q9Y4F9 1068 aa13.73□□□□□ -0.21
PCAT1-202ENST00000561978 F13A1P00488 732 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 CHRNDQ07001 517 aa13.72□□□□□ -0.21
PCAT1-202ENST00000561978 ATP2B3Q16720 1220 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms