RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 PDE8BO95263 885 aa18.33■□□□□ 0.52
SPG7-205ENST00000561945 IREB2P48200 963 aaKnown RBP18.33■□□□□ 0.52
SPG7-205ENST00000561945 VEZTQ9HBM0 779 aa18.33■□□□□ 0.52
SPG7-205ENST00000561945 E9PSI1 815 aa18.32■□□□□ 0.52
SPG7-205ENST00000561945 GJA5P36382 358 aa18.32■□□□□ 0.52
SPG7-205ENST00000561945 LRRC24Q50LG9 513 aa18.32■□□□□ 0.52
SPG7-205ENST00000561945 DZIP1LQ8IYY4 767 aaKnown RBP18.32■□□□□ 0.52
SPG7-205ENST00000561945 USP44Q9H0E7 712 aa18.32■□□□□ 0.52
SPG7-205ENST00000561945 RBBP6Q7Z6E9 1792 aaKnown RBP18.32■□□□□ 0.52
SPG7-205ENST00000561945 FGFR2P21802 821 aa18.31■□□□□ 0.52
SPG7-205ENST00000561945 CRKP46108 304 aa18.31■□□□□ 0.52
SPG7-205ENST00000561945 RBM5P52756 815 aaKnown RBP eCLIP18.31■□□□□ 0.52
SPG7-205ENST00000561945 TBC1D22AQ8WUA7 517 aa18.31■□□□□ 0.52
SPG7-205ENST00000561945 TDRD3Q9H7E2 651 aaKnown RBP18.31■□□□□ 0.52
SPG7-205ENST00000561945 GRIK5Q16478 980 aa18.3■□□□□ 0.52
SPG7-205ENST00000561945 SSH1Q8WYL5 1049 aa18.3■□□□□ 0.52
SPG7-205ENST00000561945 MYH13Q9UKX3 1938 aa18.29■□□□□ 0.52
SPG7-205ENST00000561945 SLFN5Q08AF3 891 aa18.29■□□□□ 0.52
SPG7-205ENST00000561945 ALDH1L2Q3SY69 923 aa18.29■□□□□ 0.52
SPG7-205ENST00000561945 CAVIN4Q5BKX8 364 aa18.29■□□□□ 0.52
SPG7-205ENST00000561945 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.29■□□□□ 0.52
SPG7-205ENST00000561945 MS4A4AQ96JQ5 239 aa18.29■□□□□ 0.52
SPG7-205ENST00000561945 PTPN18Q99952 460 aa18.29■□□□□ 0.52
SPG7-205ENST00000561945 SUGT1Q9Y2Z0 365 aa18.29■□□□□ 0.52
SPG7-205ENST00000561945 RFX5P48382 616 aaPredicted RBP18.28■□□□□ 0.52
SPG7-205ENST00000561945 METTL24Q5JXM2 366 aa18.28■□□□□ 0.52
SPG7-205ENST00000561945 FKBP1CQ5VVH2 108 aa18.28■□□□□ 0.52
SPG7-205ENST00000561945 CDAN1Q8IWY9 1227 aa18.28■□□□□ 0.52
SPG7-205ENST00000561945 TRMT2AQ8IZ69 625 aaKnown RBP18.28■□□□□ 0.52
SPG7-205ENST00000561945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.28■□□□□ 0.52
SPG7-205ENST00000561945 ZDHHC15Q96MV8 337 aa18.28■□□□□ 0.52
SPG7-205ENST00000561945 ZBTB22O15209 634 aa18.27■□□□□ 0.52
SPG7-205ENST00000561945 TNNI2P48788 182 aa18.27■□□□□ 0.52
SPG7-205ENST00000561945 OTUD7BQ6GQQ9 843 aa18.27■□□□□ 0.52
SPG7-205ENST00000561945 RPAP1Q9BWH6 1393 aaPredicted RBP18.27■□□□□ 0.51
SPG7-205ENST00000561945 CRHR2Q13324 411 aa18.26■□□□□ 0.51
SPG7-205ENST00000561945 PUM3Q15397 648 aaKnown RBP18.26■□□□□ 0.51
SPG7-205ENST00000561945 OTOP1Q7RTM1 612 aa18.26■□□□□ 0.51
SPG7-205ENST00000561945 FAM83AQ86UY5 434 aa18.26■□□□□ 0.51
SPG7-205ENST00000561945 VPS37DQ86XT2 251 aa18.26■□□□□ 0.51
SPG7-205ENST00000561945 KLHDC4Q8TBB5 520 aa18.26■□□□□ 0.51
SPG7-205ENST00000561945 TEKT1Q969V4 418 aa18.26■□□□□ 0.51
SPG7-205ENST00000561945 OPTNQ96CV9 577 aa18.26■□□□□ 0.51
SPG7-205ENST00000561945 TMEM39BQ9GZU3 492 aa18.26■□□□□ 0.51
SPG7-205ENST00000561945 MAST3O60307 1309 aa18.25■□□□□ 0.51
SPG7-205ENST00000561945 TCP10L2B9ZVM9 353 aa18.25■□□□□ 0.51
SPG7-205ENST00000561945 EYA2O00167 538 aa18.25■□□□□ 0.51
SPG7-205ENST00000561945 BCAMP50895 628 aa18.25■□□□□ 0.51
SPG7-205ENST00000561945 MAP3K9P80192 1104 aa18.25■□□□□ 0.51
SPG7-205ENST00000561945 VGLL4Q14135 290 aa18.25■□□□□ 0.51
SPG7-205ENST00000561945 APOBEC3HQ6NTF7 200 aaKnown RBP18.25■□□□□ 0.51
SPG7-205ENST00000561945 HHIPL2Q6UWX4 724 aa18.25■□□□□ 0.51
SPG7-205ENST00000561945 ERO1AQ96HE7 468 aa18.25■□□□□ 0.51
SPG7-205ENST00000561945 ELP3Q9H9T3 547 aa18.25■□□□□ 0.51
SPG7-205ENST00000561945 FBXO3Q9UK99 471 aa18.25■□□□□ 0.51
SPG7-205ENST00000561945 IQSEC3Q9UPP2 1182 aaPredicted RBP18.25■□□□□ 0.51
SPG7-205ENST00000561945 IFIT1P09914 478 aaKnown RBP18.23■□□□□ 0.51
SPG7-205ENST00000561945 CT47B1P0C2W7 299 aaPredicted RBP18.23■□□□□ 0.51
SPG7-205ENST00000561945 PRPF38BQ5VTL8 546 aaKnown RBP18.23■□□□□ 0.51
SPG7-205ENST00000561945 INTS3Q68E01 1043 aaKnown RBP18.23■□□□□ 0.51
SPG7-205ENST00000561945 ATG9AQ7Z3C6 839 aa18.23■□□□□ 0.51
SPG7-205ENST00000561945 BRI3BPQ8WY22 251 aa18.23■□□□□ 0.51
SPG7-205ENST00000561945 LPIN2Q92539 896 aa18.23■□□□□ 0.51
SPG7-205ENST00000561945 PTPN22Q9Y2R2 807 aa18.23■□□□□ 0.51
SPG7-205ENST00000561945 TRIM17Q9Y577 477 aa18.23■□□□□ 0.51
SPG7-205ENST00000561945 SPDYE5A6NIY4 337 aa18.22■□□□□ 0.51
SPG7-205ENST00000561945 CIAO1O76071 339 aa18.22■□□□□ 0.51
SPG7-205ENST00000561945 GTF2A2P52657 109 aa18.22■□□□□ 0.51
SPG7-205ENST00000561945 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
SPG7-205ENST00000561945 ZCCHC17Q9NP64 241 aaKnown RBP18.22■□□□□ 0.51
SPG7-205ENST00000561945 FRAT2O75474 233 aaPredicted RBP18.21■□□□□ 0.51
SPG7-205ENST00000561945 CAP1Q01518 475 aa18.21■□□□□ 0.51
SPG7-205ENST00000561945 SP3Q02447 781 aa18.21■□□□□ 0.51
SPG7-205ENST00000561945 WDR66Q8TBY9 1149 aa18.21■□□□□ 0.51
SPG7-205ENST00000561945 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
SPG7-205ENST00000561945 ARMC5Q96C12 935 aa18.21■□□□□ 0.51
SPG7-205ENST00000561945 HOOK2Q96ED9 719 aa18.21■□□□□ 0.51
SPG7-205ENST00000561945 CSADQ9Y600 493 aa18.21■□□□□ 0.51
SPG7-205ENST00000561945 SNCAIPQ9Y6H5 919 aa18.21■□□□□ 0.51
SPG7-205ENST00000561945 SLC5A1P13866 664 aa18.2■□□□□ 0.5
SPG7-205ENST00000561945 CD99L2Q8TCZ2 262 aa18.2■□□□□ 0.5
SPG7-205ENST00000561945 CDCA7LQ96GN5 454 aa18.2■□□□□ 0.5
SPG7-205ENST00000561945 SALL1Q9NSC2 1324 aa18.2■□□□□ 0.5
SPG7-205ENST00000561945 CCL15-CCL14A0A0B4J2E2 113 aa18.19■□□□□ 0.5
SPG7-205ENST00000561945 CACNB3P54284 484 aa18.19■□□□□ 0.5
SPG7-205ENST00000561945 CCL15Q16663 113 aa18.19■□□□□ 0.5
SPG7-205ENST00000561945 ERO1BQ86YB8 467 aa18.19■□□□□ 0.5
SPG7-205ENST00000561945 TMOD2Q9NZR1 351 aa18.19■□□□□ 0.5
SPG7-205ENST00000561945 FAM43AQ8N2R8 423 aa18.18■□□□□ 0.5
SPG7-205ENST00000561945 FAM151AQ8WW52 585 aa18.18■□□□□ 0.5
SPG7-205ENST00000561945 OTUD5Q96G74 571 aa18.18■□□□□ 0.5
SPG7-205ENST00000561945 EFCC1Q9HA90 598 aa18.18■□□□□ 0.5
SPG7-205ENST00000561945 ZFYVE28Q9HCC9 887 aa18.18■□□□□ 0.5
SPG7-205ENST00000561945 SMC4Q9NTJ3 1288 aa18.18■□□□□ 0.5
SPG7-205ENST00000561945 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.18■□□□□ 0.5
SPG7-205ENST00000561945 ZNF112Q9UJU3 913 aa18.18■□□□□ 0.5
SPG7-205ENST00000561945 SEMA3EO15041 775 aa18.17■□□□□ 0.5
SPG7-205ENST00000561945 UBTFL1P0CB47 393 aaPredicted RBP18.17■□□□□ 0.5
SPG7-205ENST00000561945 PPIL2Q13356 520 aa18.17■□□□□ 0.5
SPG7-205ENST00000561945 WRNIP1Q96S55 665 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms