RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 ZSWIM6Q9HCJ5 1215 aa21.46■■□□□ 1.03
RAB40C-206ENST00000561781 TPCN1Q9ULQ1 816 aa21.46■■□□□ 1.03
RAB40C-206ENST00000561781 PDCP20941 246 aa21.45■■□□□ 1.02
RAB40C-206ENST00000561781 PPP2R3AQ06190 1150 aa21.45■■□□□ 1.02
RAB40C-206ENST00000561781 ARMCX5Q6P1M9 558 aa21.45■■□□□ 1.02
RAB40C-206ENST00000561781 GBP6Q6ZN66 633 aa21.45■■□□□ 1.02
RAB40C-206ENST00000561781 PI4K2BQ8TCG2 481 aa21.45■■□□□ 1.02
RAB40C-206ENST00000561781 FAN1Q9Y2M0 1017 aa21.45■■□□□ 1.02
RAB40C-206ENST00000561781 FAM71BQ8TC56 605 aa21.45■■□□□ 1.02
RAB40C-206ENST00000561781 MAP3K9P80192 1104 aa21.44■■□□□ 1.02
RAB40C-206ENST00000561781 HSP90B2PQ58FF3 399 aa21.44■■□□□ 1.02
RAB40C-206ENST00000561781 KAT2BQ92831 832 aa21.44■■□□□ 1.02
RAB40C-206ENST00000561781 GNL3LQ9NVN8 582 aaKnown RBP21.44■■□□□ 1.02
RAB40C-206ENST00000561781 A0A087WWV3 80 aa21.44■■□□□ 1.02
RAB40C-206ENST00000561781 PRPF40BQ6NWY9 871 aaKnown RBP21.44■■□□□ 1.02
RAB40C-206ENST00000561781 ANO10Q9NW15 660 aa21.44■■□□□ 1.02
RAB40C-206ENST00000561781 MCM6Q14566 821 aa21.43■■□□□ 1.02
RAB40C-206ENST00000561781 CNNM3Q8NE01 707 aa21.43■■□□□ 1.02
RAB40C-206ENST00000561781 DDX11Q96FC9 970 aa21.43■■□□□ 1.02
RAB40C-206ENST00000561781 UTP14AQ9BVJ6 771 aaKnown RBP21.43■■□□□ 1.02
RAB40C-206ENST00000561781 IL2RBP14784 551 aa21.43■■□□□ 1.02
RAB40C-206ENST00000561781 MCM10Q7L590 875 aa21.43■■□□□ 1.02
RAB40C-206ENST00000561781 NAT10Q9H0A0 1025 aaKnown RBP21.43■■□□□ 1.02
RAB40C-206ENST00000561781 ERLIN1O75477 346 aa21.42■■□□□ 1.02
RAB40C-206ENST00000561781 ERCC3P19447 782 aa21.42■■□□□ 1.02
RAB40C-206ENST00000561781 RXRBP28702 533 aa21.42■■□□□ 1.02
RAB40C-206ENST00000561781 PTH1RQ03431 593 aa21.42■■□□□ 1.02
RAB40C-206ENST00000561781 CNTROBQ8N137 903 aa21.42■■□□□ 1.02
RAB40C-206ENST00000561781 RAPGEF4Q8WZA2 1011 aa21.42■■□□□ 1.02
RAB40C-206ENST00000561781 MIEF2Q96C03 454 aa21.42■■□□□ 1.02
RAB40C-206ENST00000561781 TM6SF1Q9BZW5 370 aa21.42■■□□□ 1.02
RAB40C-206ENST00000561781 KDRP35968 1356 aa21.42■■□□□ 1.02
RAB40C-206ENST00000561781 POTEB2H3BUK9 544 aa21.41■■□□□ 1.02
RAB40C-206ENST00000561781 CEP57L1Q8IYX8 460 aa21.41■■□□□ 1.02
RAB40C-206ENST00000561781 MRFAP1Q9Y605 127 aa21.41■■□□□ 1.02
RAB40C-206ENST00000561781 SCP2P22307 547 aa21.41■■□□□ 1.02
RAB40C-206ENST00000561781 NEDD9Q14511 834 aa21.41■■□□□ 1.02
RAB40C-206ENST00000561781 BEND6Q5SZJ8 279 aaPredicted RBP21.41■■□□□ 1.02
RAB40C-206ENST00000561781 KCNV1Q6PIU1 500 aa21.41■■□□□ 1.02
RAB40C-206ENST00000561781 SEPT12Q8IYM1 358 aa21.41■■□□□ 1.02
RAB40C-206ENST00000561781 NCAPD2Q15021 1401 aa21.41■■□□□ 1.02
RAB40C-206ENST00000561781 ADCY9O60503 1353 aa21.41■■□□□ 1.02
RAB40C-206ENST00000561781 DISP2A7MBM2 1401 aa21.4■■□□□ 1.02
RAB40C-206ENST00000561781 ZSCAN12O43309 604 aa21.4■■□□□ 1.02
RAB40C-206ENST00000561781 PLEKHO1Q53GL0 409 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-206ENST00000561781 TMC6Q7Z403 805 aa21.4■■□□□ 1.02
RAB40C-206ENST00000561781 USP5P45974 858 aa21.4■■□□□ 1.02
RAB40C-206ENST00000561781 BIRC2Q13490 618 aa21.4■■□□□ 1.02
RAB40C-206ENST00000561781 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
RAB40C-206ENST00000561781 AOPEPQ8N6M6 819 aa21.4■■□□□ 1.02
RAB40C-206ENST00000561781 BICC1Q9H694 974 aaKnown RBP21.4■■□□□ 1.02
RAB40C-206ENST00000561781 FANCGO15287 622 aa21.39■■□□□ 1.02
RAB40C-206ENST00000561781 IFIT2P09913 472 aaKnown RBP21.39■■□□□ 1.02
RAB40C-206ENST00000561781 FCHSD1Q86WN1 690 aa21.39■■□□□ 1.02
RAB40C-206ENST00000561781 ACBD3Q9H3P7 528 aa21.39■■□□□ 1.02
RAB40C-206ENST00000561781 KLHL33A6NCF5 533 aa21.39■■□□□ 1.01
RAB40C-206ENST00000561781 SSR1P43307 286 aaKnown RBP21.39■■□□□ 1.01
RAB40C-206ENST00000561781 SOS1Q07889 1333 aaPredicted RBP21.39■■□□□ 1.01
RAB40C-206ENST00000561781 H0YHG0 523 aa21.38■■□□□ 1.01
RAB40C-206ENST00000561781 ELF1P32519 619 aa21.38■■□□□ 1.01
RAB40C-206ENST00000561781 SARNPP82979 210 aaKnown RBP21.38■■□□□ 1.01
RAB40C-206ENST00000561781 BSDC1Q9NW68 430 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-206ENST00000561781 TATP17735 454 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-206ENST00000561781 LIG3P49916 1009 aa21.38■■□□□ 1.01
RAB40C-206ENST00000561781 IRX1P78414 480 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-206ENST00000561781 GOLGA6L9A6NEM1 432 aa21.37■■□□□ 1.01
RAB40C-206ENST00000561781 DDR1Q08345 913 aa21.37■■□□□ 1.01
RAB40C-206ENST00000561781 EXOC5O00471 708 aa21.37■■□□□ 1.01
RAB40C-206ENST00000561781 RAB11FIP3O75154 756 aa21.37■■□□□ 1.01
RAB40C-206ENST00000561781 GIGYF1O75420 1035 aaPredicted RBP21.37■■□□□ 1.01
RAB40C-206ENST00000561781 COL9A3Q14050 684 aaPredicted RBP21.37■■□□□ 1.01
RAB40C-206ENST00000561781 MTHFSDQ2M296 383 aaKnown RBP21.37■■□□□ 1.01
RAB40C-206ENST00000561781 BARGINQ6ZT62 677 aa21.37■■□□□ 1.01
RAB40C-206ENST00000561781 FMNL3Q8IVF7 1028 aa21.37■■□□□ 1.01
RAB40C-206ENST00000561781 FAXDC2Q96IV6 333 aa21.37■■□□□ 1.01
RAB40C-206ENST00000561781 OVOS2A0A0G2JMS6 1433 aa21.37■■□□□ 1.01
RAB40C-206ENST00000561781 N4BP1O75113 896 aaKnown RBP21.36■■□□□ 1.01
RAB40C-206ENST00000561781 JPH2Q9BR39 696 aaPredicted RBP21.36■■□□□ 1.01
RAB40C-206ENST00000561781 MIS18AQ9NYP9 233 aa21.36■■□□□ 1.01
RAB40C-206ENST00000561781 L1RE1Q9UN81 338 aa21.36■■□□□ 1.01
RAB40C-206ENST00000561781 TUBB4BP68371 445 aa21.36■■□□□ 1.01
RAB40C-206ENST00000561781 DDB1Q16531 1140 aa21.36■■□□□ 1.01
RAB40C-206ENST00000561781 KCNB2Q92953 911 aa21.36■■□□□ 1.01
RAB40C-206ENST00000561781 FBXW7Q969H0 707 aa21.36■■□□□ 1.01
RAB40C-206ENST00000561781 RAB21Q9UL25 225 aa21.36■■□□□ 1.01
RAB40C-206ENST00000561781 LRRC37A3O60309 1634 aa21.36■■□□□ 1.01
RAB40C-206ENST00000561781 GPTP24298 496 aa21.35■■□□□ 1.01
RAB40C-206ENST00000561781 NBPF10Q6P3W6 841 aaKnown RBP21.35■■□□□ 1.01
RAB40C-206ENST00000561781 CCDC102AQ96A19 550 aa21.35■■□□□ 1.01
RAB40C-206ENST00000561781 XPO4Q9C0E2 1151 aaKnown RBP21.35■■□□□ 1.01
RAB40C-206ENST00000561781 PLEKHA4Q9H4M7 779 aa21.35■■□□□ 1.01
RAB40C-206ENST00000561781 FAM204AQ9H8W3 233 aa21.35■■□□□ 1.01
RAB40C-206ENST00000561781 VEZTQ9HBM0 779 aa21.35■■□□□ 1.01
RAB40C-206ENST00000561781 THRAP3Q9Y2W1 955 aaKnown RBP21.35■■□□□ 1.01
RAB40C-206ENST00000561781 SH3BP1Q9Y3L3 701 aa21.35■■□□□ 1.01
RAB40C-206ENST00000561781 WNK3Q9BYP7 1800 aa21.35■■□□□ 1.01
RAB40C-206ENST00000561781 CYP27B1O15528 508 aa21.35■■□□□ 1.01
RAB40C-206ENST00000561781 FBXW10Q5XX13 1052 aa21.35■■□□□ 1.01
RAB40C-206ENST00000561781 ZKSCAN1P17029 563 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-206ENST00000561781 SCRN1Q12765 414 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms