RNA–Protein interactions for RNA: ENST00000561609.5

PKM-205, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 1,568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-205ENST00000561609 CCDC88AQ3V6T2 1871 aa13.46□□□□□ -0.25
PKM-205ENST00000561609 PATL2C9JE40 543 aaKnown RBP13.46□□□□□ -0.25
PKM-205ENST00000561609 E7EWF7 191 aa13.46□□□□□ -0.25
PKM-205ENST00000561609 H0YIN7 160 aa13.46□□□□□ -0.25
PKM-205ENST00000561609 HMGB1P09429 215 aaKnown RBP13.46□□□□□ -0.25
PKM-205ENST00000561609 IL1R1P14778 569 aa13.46□□□□□ -0.25
PKM-205ENST00000561609 GNAT2P19087 354 aa13.46□□□□□ -0.25
PKM-205ENST00000561609 CHAF1AQ13111 956 aaPredicted RBP13.46□□□□□ -0.25
PKM-205ENST00000561609 ADGRA1Q86SQ6 560 aa13.46□□□□□ -0.25
PKM-205ENST00000561609 ZGPATQ8N5A5 531 aaKnown RBP13.46□□□□□ -0.25
PKM-205ENST00000561609 WDR66Q8TBY9 1149 aa13.46□□□□□ -0.25
PKM-205ENST00000561609 ZNF384Q8TF68 577 aa13.46□□□□□ -0.25
PKM-205ENST00000561609 NSUN4Q96CB9 384 aaKnown RBP13.46□□□□□ -0.25
PKM-205ENST00000561609 ARMT1Q9H993 441 aa13.46□□□□□ -0.25
PKM-205ENST00000561609 CD209Q9NNX6 404 aa13.46□□□□□ -0.25
PKM-205ENST00000561609 ANKRD1Q15327 319 aa13.45□□□□□ -0.26
PKM-205ENST00000561609 SPTY2D1Q68D10 685 aaPredicted RBP13.45□□□□□ -0.26
PKM-205ENST00000561609 NAA16Q6N069 864 aaPredicted RBP13.45□□□□□ -0.26
PKM-205ENST00000561609 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
PKM-205ENST00000561609 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.263e-17■□□□□ 9.9
PKM-205ENST00000561609 ZSCAN31Q96LW9 406 aaPredicted RBP13.45□□□□□ -0.26
PKM-205ENST00000561609 ANP32EQ9BTT0 268 aa13.45□□□□□ -0.26
PKM-205ENST00000561609 C10orf71Q711Q0 1435 aa13.45□□□□□ -0.26
PKM-205ENST00000561609 C6orf229H3BNL8 230 aa13.45□□□□□ -0.26
PKM-205ENST00000561609 ZNF213O14771 459 aa13.45□□□□□ -0.26
PKM-205ENST00000561609 MECOMQ03112 1051 aa13.45□□□□□ -0.26
PKM-205ENST00000561609 TOB2Q14106 344 aaPredicted RBP13.45□□□□□ -0.26
PKM-205ENST00000561609 MPNDQ8N594 471 aa13.45□□□□□ -0.26
PKM-205ENST00000561609 MIGA1Q8NAN2 632 aa13.45□□□□□ -0.26
PKM-205ENST00000561609 RIOK1Q9BRS2 568 aaKnown RBP13.45□□□□□ -0.26
PKM-205ENST00000561609 EPB41L4AQ9HCS5 686 aaPredicted RBP13.45□□□□□ -0.26
PKM-205ENST00000561609 DLEC1Q9Y238 1755 aa13.44□□□□□ -0.26
PKM-205ENST00000561609 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
PKM-205ENST00000561609 GSG1L2A8MUP6 293 aa13.44□□□□□ -0.26
PKM-205ENST00000561609 APPP05067 770 aa13.44□□□□□ -0.26
PKM-205ENST00000561609 PRDX5P30044 214 aa13.44□□□□□ -0.26
PKM-205ENST00000561609 EXOSC10Q01780 885 aaKnown RBP13.44□□□□□ -0.26
PKM-205ENST00000561609 DHX32Q7L7V1 743 aaKnown RBP13.44□□□□□ -0.26
PKM-205ENST00000561609 IFNL3Q8IZI9 196 aa13.44□□□□□ -0.26
PKM-205ENST00000561609 TCEANC2Q96MN5 208 aa13.44□□□□□ -0.26
PKM-205ENST00000561609 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
PKM-205ENST00000561609 SH2B1Q9NRF2 756 aaPredicted RBP13.44□□□□□ -0.26
PKM-205ENST00000561609 SLX4Q8IY92 1834 aa13.44□□□□□ -0.26
PKM-205ENST00000561609 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 LARGE1O95461 756 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 CHRNA5P30532 468 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 HAND2P61296 217 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 RAB3GAP1Q15042 981 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 NFKBIBQ15653 356 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 OLFM4Q6UX06 510 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 DPP8Q6V1X1 898 aaPredicted RBP13.43□□□□□ -0.26
PKM-205ENST00000561609 CNKSR1Q969H4 720 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 NBPF3Q9H094 633 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
PKM-205ENST00000561609 TPCN1Q9ULQ1 816 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 SLC4A4Q9Y6R1 1079 aa13.43□□□□□ -0.26
PKM-205ENST00000561609 PRKAB2O43741 272 aa13.42□□□□□ -0.26
PKM-205ENST00000561609 ME3Q16798 604 aa13.42□□□□□ -0.26
PKM-205ENST00000561609 Q6ZUG5 572 aa13.42□□□□□ -0.26
PKM-205ENST00000561609 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
PKM-205ENST00000561609 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
PKM-205ENST00000561609 COA1Q9GZY4 146 aa13.42□□□□□ -0.26
PKM-205ENST00000561609 NAPBQ9H115 298 aa13.42□□□□□ -0.26
PKM-205ENST00000561609 JAG2Q9Y219 1238 aa13.42□□□□□ -0.26
PKM-205ENST00000561609 KIF13BQ9NQT8 1826 aa13.42□□□□□ -0.26
PKM-205ENST00000561609 FAM205AQ6ZU69 1335 aa13.41□□□□□ -0.26
PKM-205ENST00000561609 LDHBP07195 334 aaKnown RBP13.41□□□□□ -0.26
PKM-205ENST00000561609 DYNLL1P63167 89 aaKnown RBP13.41□□□□□ -0.26
PKM-205ENST00000561609 ILDR1Q86SU0 546 aaPredicted RBP13.41□□□□□ -0.26
PKM-205ENST00000561609 DZIP1Q86YF9 867 aaKnown RBP13.41□□□□□ -0.26
PKM-205ENST00000561609 FBXL16Q8N461 479 aa13.41□□□□□ -0.26
PKM-205ENST00000561609 ZC3H12CQ9C0D7 883 aaKnown RBP13.41□□□□□ -0.26
PKM-205ENST00000561609 SNED1Q8TER0 1413 aa13.41□□□□□ -0.26
PKM-205ENST00000561609 WDR19Q8NEZ3 1342 aa13.41□□□□□ -0.26
PKM-205ENST00000561609 NUCB2P80303 420 aa13.41□□□□□ -0.26
PKM-205ENST00000561609 ST3GAL1Q11201 340 aa13.41□□□□□ -0.26
PKM-205ENST00000561609 TBC1D10CQ8IV04 446 aa13.41□□□□□ -0.26
PKM-205ENST00000561609 MB21D2Q8IYB1 491 aaPredicted RBP13.41□□□□□ -0.26
PKM-205ENST00000561609 NCOA7Q8NI08 942 aa13.41□□□□□ -0.26
PKM-205ENST00000561609 C7orf43Q8WVR3 580 aa13.41□□□□□ -0.26
PKM-205ENST00000561609 EYA3Q99504 573 aa13.41□□□□□ -0.26
PKM-205ENST00000561609 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.41□□□□□ -0.26
PKM-205ENST00000561609 CHD4Q14839 1912 aa13.4□□□□□ -0.26
PKM-205ENST00000561609 RIMBP2O15034 1052 aa13.4□□□□□ -0.26
PKM-205ENST00000561609 TDO2P48775 406 aa13.4□□□□□ -0.26
PKM-205ENST00000561609 GSTO1P78417 241 aa13.4□□□□□ -0.26
PKM-205ENST00000561609 NBR1Q14596 966 aa13.4□□□□□ -0.26
PKM-205ENST00000561609 GRIK5Q16478 980 aa13.4□□□□□ -0.26
PKM-205ENST00000561609 GIMAP6Q6P9H5 292 aa13.4□□□□□ -0.26
PKM-205ENST00000561609 TBC1D22AQ8WUA7 517 aa13.4□□□□□ -0.26
PKM-205ENST00000561609 RTFDC1Q9BY42 306 aaPredicted RBP13.4□□□□□ -0.26
PKM-205ENST00000561609 MCM5P33992 734 aa13.39□□□□□ -0.27
PKM-205ENST00000561609 CC2D2BQ6DHV5 1058 aa13.39□□□□□ -0.27
PKM-205ENST00000561609 RALYLQ86SE5 291 aaKnown RBP13.39□□□□□ -0.27
PKM-205ENST00000561609 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
PKM-205ENST00000561609 SDR42E1Q8WUS8 393 aa13.39□□□□□ -0.27
PKM-205ENST00000561609 TNPO1Q92973 898 aaKnown RBP13.39□□□□□ -0.27
PKM-205ENST00000561609 LRRC2Q9BYS8 371 aa13.39□□□□□ -0.27
PKM-205ENST00000561609 AATFQ9NY61 560 aaKnown RBP eCLIP13.39□□□□□ -0.27
PKM-205ENST00000561609 LDHCP07864 332 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms