RNA–Protein interactions for RNA: ENST00000561442.5

USP3-221, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-221ENST00000561442 ZGPATQ8N5A5 531 aaKnown RBP17.53■□□□□ 0.4
USP3-221ENST00000561442 ZC3H15Q8WU90 426 aaKnown RBP17.53■□□□□ 0.4
USP3-221ENST00000561442 ZNF512BQ96KM6 892 aaPredicted RBP17.53■□□□□ 0.4
USP3-221ENST00000561442 GLIS2Q9BZE0 524 aaPredicted RBP17.53■□□□□ 0.4
USP3-221ENST00000561442 SCAF8Q9UPN6 1271 aaKnown RBP17.53■□□□□ 0.4
USP3-221ENST00000561442 SUGT1Q9Y2Z0 365 aa17.53■□□□□ 0.4
USP3-221ENST00000561442 AOX1Q06278 1338 aa17.52■□□□□ 0.4
USP3-221ENST00000561442 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
USP3-221ENST00000561442 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
USP3-221ENST00000561442 DIXDC1Q155Q3 683 aa17.52■□□□□ 0.4
USP3-221ENST00000561442 TSHZ3Q63HK5 1081 aa17.52■□□□□ 0.4
USP3-221ENST00000561442 ZBED3Q96IU2 234 aaPredicted RBP17.52■□□□□ 0.4
USP3-221ENST00000561442 PRMT6Q96LA8 375 aaPredicted RBP17.52■□□□□ 0.4
USP3-221ENST00000561442 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
USP3-221ENST00000561442 PGAP2Q9UHJ9 254 aa17.52■□□□□ 0.4
USP3-221ENST00000561442 SERPINA10Q9UK55 444 aa17.52■□□□□ 0.4
USP3-221ENST00000561442 MAST3O60307 1309 aa17.51■□□□□ 0.39
USP3-221ENST00000561442 ADAMTSL1Q8N6G6 1762 aa17.51■□□□□ 0.39
USP3-221ENST00000561442 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
USP3-221ENST00000561442 TRAF5O00463 557 aa17.51■□□□□ 0.39
USP3-221ENST00000561442 CYP2E1P05181 493 aaPredicted RBP17.51■□□□□ 0.39
USP3-221ENST00000561442 FMR1Q06787 632 aaKnown RBP eCLIP17.51■□□□□ 0.39
USP3-221ENST00000561442 SPTY2D1Q68D10 685 aaPredicted RBP17.51■□□□□ 0.39
USP3-221ENST00000561442 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
USP3-221ENST00000561442 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
USP3-221ENST00000561442 USP48Q86UV5 1035 aa17.51■□□□□ 0.39
USP3-221ENST00000561442 DZIP1Q86YF9 867 aaKnown RBP17.51■□□□□ 0.39
USP3-221ENST00000561442 MTMR14Q8NCE2 650 aa17.51■□□□□ 0.39
USP3-221ENST00000561442 OTUD7AQ8TE49 926 aaPredicted RBP17.51■□□□□ 0.39
USP3-221ENST00000561442 TEKT1Q969V4 418 aa17.51■□□□□ 0.39
USP3-221ENST00000561442 DCPSQ96C86 337 aaKnown RBP17.51■□□□□ 0.39
USP3-221ENST00000561442 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
USP3-221ENST00000561442 ADM5C9JUS6 153 aa17.5■□□□□ 0.39
USP3-221ENST00000561442 NEFLP07196 543 aa17.5■□□□□ 0.39
USP3-221ENST00000561442 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
USP3-221ENST00000561442 SMC5Q8IY18 1101 aa17.5■□□□□ 0.39
USP3-221ENST00000561442 DNAJC2Q99543 621 aaKnown RBP17.5■□□□□ 0.39
USP3-221ENST00000561442 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
USP3-221ENST00000561442 PIH1D3Q9NQM4 214 aaKnown RBP17.5■□□□□ 0.39
USP3-221ENST00000561442 LRP2BPQ9P2M1 347 aa17.5■□□□□ 0.39
USP3-221ENST00000561442 ITGBL1O95965 494 aaPredicted RBP17.49■□□□□ 0.39
USP3-221ENST00000561442 HDLBPQ00341 1268 aaKnown RBP17.49■□□□□ 0.39
USP3-221ENST00000561442 MECOMQ03112 1051 aa17.49■□□□□ 0.39
USP3-221ENST00000561442 LNPKQ9C0E8 428 aa17.49■□□□□ 0.39
USP3-221ENST00000561442 ANTXR1Q9H6X2 564 aa17.49■□□□□ 0.39
USP3-221ENST00000561442 VEZTQ9HBM0 779 aa17.49■□□□□ 0.39
USP3-221ENST00000561442 DAGLAQ9Y4D2 1042 aa17.49■□□□□ 0.39
USP3-221ENST00000561442 ATP5JP18859 108 aa17.48■□□□□ 0.39
USP3-221ENST00000561442 CDC37L1Q7L3B6 337 aa17.48■□□□□ 0.39
USP3-221ENST00000561442 SULF1Q8IWU6 871 aa17.48■□□□□ 0.39
USP3-221ENST00000561442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.48■□□□□ 0.39
USP3-221ENST00000561442 EDC3Q96F86 508 aaKnown RBP17.48■□□□□ 0.39
USP3-221ENST00000561442 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
USP3-221ENST00000561442 ZDHHC15Q96MV8 337 aa17.48■□□□□ 0.39
USP3-221ENST00000561442 TDRD3Q9H7E2 651 aaKnown RBP17.48■□□□□ 0.39
USP3-221ENST00000561442 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
USP3-221ENST00000561442 GOLIM4O00461 696 aa17.47■□□□□ 0.39
USP3-221ENST00000561442 MYO1BO43795 1136 aa17.47■□□□□ 0.39
USP3-221ENST00000561442 IDH1O75874 414 aaKnown RBP17.47■□□□□ 0.39
USP3-221ENST00000561442 APOBEC3HQ6NTF7 200 aaKnown RBP17.47■□□□□ 0.39
USP3-221ENST00000561442 HHIPL2Q6UWX4 724 aa17.47■□□□□ 0.39
USP3-221ENST00000561442 ZNF384Q8TF68 577 aa17.47■□□□□ 0.39
USP3-221ENST00000561442 MRIQ9BWK5 157 aa17.47■□□□□ 0.39
USP3-221ENST00000561442 PASKQ96RG2 1323 aa17.47■□□□□ 0.39
USP3-221ENST00000561442 SPDYE2Q495Y8 402 aa17.46■□□□□ 0.39
USP3-221ENST00000561442 NSUN4Q96CB9 384 aaKnown RBP17.46■□□□□ 0.39
USP3-221ENST00000561442 HAUS7Q99871 368 aa17.46■□□□□ 0.39
USP3-221ENST00000561442 ZNF408Q9H9D4 720 aa17.46■□□□□ 0.39
USP3-221ENST00000561442 ZNF70Q9UC06 446 aaPredicted RBP17.46■□□□□ 0.39
USP3-221ENST00000561442 PITPNM2Q9BZ72 1349 aa17.46■□□□□ 0.38
USP3-221ENST00000561442 MYH13Q9UKX3 1938 aa17.45■□□□□ 0.38
USP3-221ENST00000561442 CACNB3P54284 484 aa17.45■□□□□ 0.38
USP3-221ENST00000561442 NUCB1Q02818 461 aa17.45■□□□□ 0.38
USP3-221ENST00000561442 PRAMEF18Q5VWM3 479 aa17.45■□□□□ 0.38
USP3-221ENST00000561442 NAA16Q6N069 864 aaPredicted RBP17.45■□□□□ 0.38
USP3-221ENST00000561442 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
USP3-221ENST00000561442 APOBEC3FQ8IUX4 373 aaKnown RBP17.45■□□□□ 0.38
USP3-221ENST00000561442 MROH7-TTC4A0A0A0MT08 1334 aa17.45■□□□□ 0.38
USP3-221ENST00000561442 GAKO14976 1311 aa17.45■□□□□ 0.38
USP3-221ENST00000561442 TCP10L2B9ZVM9 353 aa17.44■□□□□ 0.38
USP3-221ENST00000561442 HSPA6P17066 643 aa17.44■□□□□ 0.38
USP3-221ENST00000561442 MX1P20591 662 aa17.44■□□□□ 0.38
USP3-221ENST00000561442 APLP1P51693 650 aa17.44■□□□□ 0.38
USP3-221ENST00000561442 GSTO1P78417 241 aa17.44■□□□□ 0.38
USP3-221ENST00000561442 HTRA3P83110 453 aa17.44■□□□□ 0.38
USP3-221ENST00000561442 SLF2Q8IX21 1173 aa17.44■□□□□ 0.38
USP3-221ENST00000561442 PAG1Q9NWQ8 432 aa17.44■□□□□ 0.38
USP3-221ENST00000561442 CELF2O95319 508 aaKnown RBP17.43■□□□□ 0.38
USP3-221ENST00000561442 MAP4K4O95819 1239 aaPredicted RBP17.43■□□□□ 0.38
USP3-221ENST00000561442 BTDP43251 543 aa17.43■□□□□ 0.38
USP3-221ENST00000561442 CDC42EP5Q6NZY7 148 aa17.43■□□□□ 0.38
USP3-221ENST00000561442 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
USP3-221ENST00000561442 CDCA5Q96FF9 252 aa17.43■□□□□ 0.38
USP3-221ENST00000561442 DEFB129Q9H1M3 183 aa17.43■□□□□ 0.38
USP3-221ENST00000561442 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
USP3-221ENST00000561442 SALL3Q9BXA9 1300 aa17.43■□□□□ 0.38
USP3-221ENST00000561442 LDHCP07864 332 aa17.42■□□□□ 0.38
USP3-221ENST00000561442 MAP3K12Q12852 859 aa17.42■□□□□ 0.38
USP3-221ENST00000561442 TTF1Q15361 905 aaPredicted RBP17.42■□□□□ 0.38
USP3-221ENST00000561442 PI4K2BQ8TCG2 481 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms