RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 GNL3LQ9NVN8 582 aaKnown RBP25.61■■□□□ 1.69
TPM1-232ENST00000561425 ZNF70Q9UC06 446 aaPredicted RBP25.61■■□□□ 1.69
TPM1-232ENST00000561425 SALL1Q9NSC2 1324 aa25.61■■□□□ 1.69
TPM1-232ENST00000561425 A0A1B0GUL7 405 aa25.6■■□□□ 1.69
TPM1-232ENST00000561425 CLRN2A0PK11 232 aa25.6■■□□□ 1.69
TPM1-232ENST00000561425 SLC10A3P09131 477 aa25.6■■□□□ 1.69
TPM1-232ENST00000561425 MS4A1P11836 297 aa25.6■■□□□ 1.69
TPM1-232ENST00000561425 CTCFP49711 727 aaPredicted RBP25.6■■□□□ 1.69
TPM1-232ENST00000561425 ZNF157P51786 506 aaPredicted RBP25.6■■□□□ 1.69
TPM1-232ENST00000561425 RBM5P52756 815 aaKnown RBP eCLIP25.6■■□□□ 1.69
TPM1-232ENST00000561425 MOB2Q70IA6 237 aa25.6■■□□□ 1.69
TPM1-232ENST00000561425 AIDAQ96BJ3 306 aa25.6■■□□□ 1.69
TPM1-232ENST00000561425 ZDHHC15Q96MV8 337 aa25.6■■□□□ 1.69
TPM1-232ENST00000561425 PRDM10Q9NQV6 1147 aa25.6■■□□□ 1.69
TPM1-232ENST00000561425 HHIPL2Q6UWX4 724 aa25.59■■□□□ 1.69
TPM1-232ENST00000561425 TDRD3Q9H7E2 651 aaKnown RBP25.59■■□□□ 1.69
TPM1-232ENST00000561425 RCAN3Q9UKA8 241 aa25.59■■□□□ 1.69
TPM1-232ENST00000561425 DENND2AQ9ULE3 1009 aa25.59■■□□□ 1.69
TPM1-232ENST00000561425 NOP58Q9Y2X3 529 aaKnown RBP25.59■■□□□ 1.69
TPM1-232ENST00000561425 PDS5AQ29RF7 1337 aaKnown RBP25.59■■□□□ 1.69
TPM1-232ENST00000561425 NF2P35240 595 aa25.58■■□□□ 1.69
TPM1-232ENST00000561425 G3BP1Q13283 466 aaKnown RBP eCLIP25.58■■□□□ 1.69
TPM1-232ENST00000561425 MAP3K11Q16584 847 aa25.58■■□□□ 1.69
TPM1-232ENST00000561425 LDLRAD1Q5T700 205 aa25.58■■□□□ 1.69
TPM1-232ENST00000561425 TEKT1Q969V4 418 aa25.58■■□□□ 1.69
TPM1-232ENST00000561425 XAGE2Q96GT9 111 aa25.58■■□□□ 1.69
TPM1-232ENST00000561425 MAST3O60307 1309 aa25.58■■□□□ 1.69
TPM1-232ENST00000561425 UBE2Q2LH0YL09 131 aa25.57■■□□□ 1.68
TPM1-232ENST00000561425 HSPA8P11142 646 aaKnown RBP25.57■■□□□ 1.68
TPM1-232ENST00000561425 RASA3Q14644 834 aa25.57■■□□□ 1.68
TPM1-232ENST00000561425 APOBEC3HQ6NTF7 200 aaKnown RBP25.57■■□□□ 1.68
TPM1-232ENST00000561425 C1orf115Q9H7X2 142 aa25.57■■□□□ 1.68
TPM1-232ENST00000561425 ECM29Q5VYK3 1845 aa25.57■■□□□ 1.68
TPM1-232ENST00000561425 RASAL3Q86YV0 1011 aa25.56■■□□□ 1.68
TPM1-232ENST00000561425 GPR108Q9NPR9 543 aa25.56■■□□□ 1.68
TPM1-232ENST00000561425 MVPQ14764 893 aaKnown RBP25.55■■□□□ 1.68
TPM1-232ENST00000561425 ARMC9Q7Z3E5 817 aa25.55■■□□□ 1.68
TPM1-232ENST00000561425 TEPSINQ96N21 525 aa25.55■■□□□ 1.68
TPM1-232ENST00000561425 VEZTQ9HBM0 779 aa25.55■■□□□ 1.68
TPM1-232ENST00000561425 SSC5DA1L4H1 1573 aa25.55■■□□□ 1.68
TPM1-232ENST00000561425 CA12O43570 354 aa25.54■■□□□ 1.68
TPM1-232ENST00000561425 KIF23Q02241 960 aaPredicted RBP25.54■■□□□ 1.68
TPM1-232ENST00000561425 TNFAIP1Q13829 316 aa25.54■■□□□ 1.68
TPM1-232ENST00000561425 RASGRF1Q13972 1273 aa25.54■■□□□ 1.68
TPM1-232ENST00000561425 SUPT20HL1Q3ZLR7 823 aa25.54■■□□□ 1.68
TPM1-232ENST00000561425 NBPF12Q5TAG4 269 aaPredicted RBP25.54■■□□□ 1.68
TPM1-232ENST00000561425 CEP85Q6P2H3 762 aa25.54■■□□□ 1.68
TPM1-232ENST00000561425 UNCXA6NJT0 531 aa25.53■■□□□ 1.68
TPM1-232ENST00000561425 PRDX5P30044 214 aa25.53■■□□□ 1.68
TPM1-232ENST00000561425 FKBP1CQ5VVH2 108 aa25.53■■□□□ 1.68
TPM1-232ENST00000561425 LBX1P52954 281 aa25.52■■□□□ 1.68
TPM1-232ENST00000561425 IFFO2Q5TF58 517 aa25.52■■□□□ 1.68
TPM1-232ENST00000561425 REM2Q8IYK8 340 aaPredicted RBP25.52■■□□□ 1.68
TPM1-232ENST00000561425 CSRNP1Q96S65 589 aa25.52■■□□□ 1.68
TPM1-232ENST00000561425 BEGAINQ9BUH8 593 aa25.52■■□□□ 1.68
TPM1-232ENST00000561425 ZBTB40Q9NUA8 1239 aa25.52■■□□□ 1.68
TPM1-232ENST00000561425 SURF6O75683 361 aaKnown RBP25.51■■□□□ 1.67
TPM1-232ENST00000561425 TTLL12Q14166 644 aaPredicted RBP25.51■■□□□ 1.67
TPM1-232ENST00000561425 NEUROD6Q96NK8 337 aa25.51■■□□□ 1.67
TPM1-232ENST00000561425 USP2O75604 605 aaPredicted RBP25.5■■□□□ 1.67
TPM1-232ENST00000561425 LDHBP07195 334 aaKnown RBP25.5■■□□□ 1.67
TPM1-232ENST00000561425 ARID4AP29374 1257 aaPredicted RBP25.5■■□□□ 1.67
TPM1-232ENST00000561425 FAM83AQ86UY5 434 aa25.5■■□□□ 1.67
TPM1-232ENST00000561425 ZGPATQ8N5A5 531 aaKnown RBP25.5■■□□□ 1.67
TPM1-232ENST00000561425 DDX19BQ9UMR2 479 aa25.5■■□□□ 1.67
TPM1-232ENST00000561425 ANGEL1Q9UNK9 670 aaKnown RBP25.5■■□□□ 1.67
TPM1-232ENST00000561425 TCP10L2B9ZVM9 353 aa25.49■■□□□ 1.67
TPM1-232ENST00000561425 PPP1R12BO60237 982 aaPredicted RBP25.49■■□□□ 1.67
TPM1-232ENST00000561425 PDE3AQ14432 1141 aa25.49■■□□□ 1.67
TPM1-232ENST00000561425 TNNI3KQ59H18 835 aa25.49■■□□□ 1.67
TPM1-232ENST00000561425 FZD1Q9UP38 647 aa25.49■■□□□ 1.67
TPM1-232ENST00000561425 DAGLAQ9Y4D2 1042 aa25.49■■□□□ 1.67
TPM1-232ENST00000561425 FPGT-TNNI3KV9GXZ4 949 aa25.49■■□□□ 1.67
TPM1-232ENST00000561425 TNNI2P48788 182 aa25.48■■□□□ 1.67
TPM1-232ENST00000561425 PRKG1Q13976 671 aa25.48■■□□□ 1.67
TPM1-232ENST00000561425 DIXDC1Q155Q3 683 aa25.48■■□□□ 1.67
TPM1-232ENST00000561425 FAM163AQ96GL9 167 aaPredicted RBP25.48■■□□□ 1.67
TPM1-232ENST00000561425 HMG20BQ9P0W2 317 aa25.48■■□□□ 1.67
TPM1-232ENST00000561425 COG6Q9Y2V7 657 aa25.48■■□□□ 1.67
TPM1-232ENST00000561425 CDAN1Q8IWY9 1227 aa25.47■■□□□ 1.67
TPM1-232ENST00000561425 RPAP2Q8IXW5 612 aaPredicted RBP25.47■■□□□ 1.67
TPM1-232ENST00000561425 TMEM39BQ9GZU3 492 aa25.47■■□□□ 1.67
TPM1-232ENST00000561425 SAGE1Q9NXZ1 904 aa25.47■■□□□ 1.67
TPM1-232ENST00000561425 GAKO14976 1311 aa25.46■■□□□ 1.67
TPM1-232ENST00000561425 CDC42EP5Q6NZY7 148 aa25.46■■□□□ 1.67
TPM1-232ENST00000561425 ZNF512BQ96KM6 892 aaPredicted RBP25.46■■□□□ 1.67
TPM1-232ENST00000561425 MYH13Q9UKX3 1938 aa25.45■■□□□ 1.67
TPM1-232ENST00000561425 UQCRFS1P1P0C7P4 283 aa25.45■■□□□ 1.66
TPM1-232ENST00000561425 TM4SF4P48230 202 aa25.45■■□□□ 1.66
TPM1-232ENST00000561425 CACNB3P54284 484 aa25.45■■□□□ 1.66
TPM1-232ENST00000561425 SPTY2D1Q68D10 685 aaPredicted RBP25.45■■□□□ 1.66
TPM1-232ENST00000561425 SPATA5Q8NB90 893 aa25.45■■□□□ 1.66
TPM1-232ENST00000561425 RNF186Q9NXI6 227 aa25.45■■□□□ 1.66
TPM1-232ENST00000561425 SPRYD7Q5W111 196 aa25.44■■□□□ 1.66
TPM1-232ENST00000561425 SIRT2Q8IXJ6 389 aa25.44■■□□□ 1.66
TPM1-232ENST00000561425 CHMP4BQ9H444 224 aaKnown RBP25.44■■□□□ 1.66
TPM1-232ENST00000561425 TMOD2Q9NZR1 351 aa25.44■■□□□ 1.66
TPM1-232ENST00000561425 MCAMP43121 646 aa25.43■■□□□ 1.66
TPM1-232ENST00000561425 IREB2P48200 963 aaKnown RBP25.43■■□□□ 1.66
TPM1-232ENST00000561425 OS9Q13438 667 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms