RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 ATG9AQ7Z3C6 839 aa18.96■□□□□ 0.63
AP4E1-205ENST00000561393 NCOA3Q9Y6Q9 1424 aa18.95■□□□□ 0.62
AP4E1-205ENST00000561393 ADCY5O95622 1261 aa18.95■□□□□ 0.62
AP4E1-205ENST00000561393 GAS2L3Q86XJ1 694 aa18.95■□□□□ 0.62
AP4E1-205ENST00000561393 CCDC47Q96A33 483 aaKnown RBP18.95■□□□□ 0.62
AP4E1-205ENST00000561393 SERPINC1P01008 464 aa18.95■□□□□ 0.62
AP4E1-205ENST00000561393 LDHBP07195 334 aaKnown RBP18.95■□□□□ 0.62
AP4E1-205ENST00000561393 ZNF804AQ7Z570 1209 aa18.95■□□□□ 0.62
AP4E1-205ENST00000561393 KAT14Q9H8E8 782 aa18.95■□□□□ 0.62
AP4E1-205ENST00000561393 ANO10Q9NW15 660 aa18.95■□□□□ 0.62
AP4E1-205ENST00000561393 AATFQ9NY61 560 aaKnown RBP eCLIP18.95■□□□□ 0.62
AP4E1-205ENST00000561393 WWC3Q9ULE0 1092 aa18.95■□□□□ 0.62
AP4E1-205ENST00000561393 NKX1-1Q15270 411 aaPredicted RBP18.94■□□□□ 0.62
AP4E1-205ENST00000561393 PHKBQ93100 1093 aa18.94■□□□□ 0.62
AP4E1-205ENST00000561393 VAT1LQ9HCJ6 419 aa18.94■□□□□ 0.62
AP4E1-205ENST00000561393 TRIM28Q13263 835 aaKnown RBP18.94■□□□□ 0.62
AP4E1-205ENST00000561393 GPT2Q8TD30 523 aa18.94■□□□□ 0.62
AP4E1-205ENST00000561393 ANKRD20A12PQ8NF67 263 aa18.94■□□□□ 0.62
AP4E1-205ENST00000561393 SDR42E1Q8WUS8 393 aa18.94■□□□□ 0.62
AP4E1-205ENST00000561393 RGPD8O14715 1765 aaPredicted RBP18.94■□□□□ 0.62
AP4E1-205ENST00000561393 OVOS2A0A0G2JMS6 1433 aa18.94■□□□□ 0.62
AP4E1-205ENST00000561393 UFL1O94874 794 aa18.93■□□□□ 0.62
AP4E1-205ENST00000561393 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
AP4E1-205ENST00000561393 HOMER1Q86YM7 354 aa18.93■□□□□ 0.62
AP4E1-205ENST00000561393 LLPHQ9BRT6 129 aaKnown RBP18.93■□□□□ 0.62
AP4E1-205ENST00000561393 PIK3C2AO00443 1686 aa18.93■□□□□ 0.62
AP4E1-205ENST00000561393 MCAMP43121 646 aa18.93■□□□□ 0.62
AP4E1-205ENST00000561393 CRACR2BQ8N4Y2 399 aaPredicted RBP18.93■□□□□ 0.62
AP4E1-205ENST00000561393 ZC3H12CQ9C0D7 883 aaKnown RBP18.93■□□□□ 0.62
AP4E1-205ENST00000561393 UTYO14607 1347 aa18.93■□□□□ 0.62
AP4E1-205ENST00000561393 CTAGE5O15320 804 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 TPM1P09493 284 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 HMGB2P26583 209 aaKnown RBP18.92■□□□□ 0.62
AP4E1-205ENST00000561393 RFX5P48382 616 aaPredicted RBP18.92■□□□□ 0.62
AP4E1-205ENST00000561393 SLF2Q8IX21 1173 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 MARCH10Q8NA82 808 aaPredicted RBP18.92■□□□□ 0.62
AP4E1-205ENST00000561393 CEP131Q9UPN4 1083 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 IFNL3Q8IZI9 196 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 CNNM3Q8NE01 707 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 TMEM87BQ96K49 555 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 SPTLC2O15270 562 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 SCRN1Q12765 414 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 PICALMQ13492 652 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 SCARF1Q14162 830 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 ANO6Q4KMQ2 910 aa18.92■□□□□ 0.62
AP4E1-205ENST00000561393 MRPS27Q92552 414 aaKnown RBP18.92■□□□□ 0.62
AP4E1-205ENST00000561393 PATL2C9JE40 543 aaKnown RBP18.91■□□□□ 0.62
AP4E1-205ENST00000561393 ADD1P35611 737 aaKnown RBP18.91■□□□□ 0.62
AP4E1-205ENST00000561393 PCMTD1Q96MG8 357 aaPredicted RBP18.91■□□□□ 0.62
AP4E1-205ENST00000561393 TSPY3P0CV98 308 aa18.91■□□□□ 0.62
AP4E1-205ENST00000561393 TSPY8P0CW00 308 aa18.91■□□□□ 0.62
AP4E1-205ENST00000561393 GSTO1P78417 241 aa18.91■□□□□ 0.62
AP4E1-205ENST00000561393 KCNG4Q8TDN1 519 aa18.91■□□□□ 0.62
AP4E1-205ENST00000561393 LEO1Q8WVC0 666 aaPredicted RBP18.91■□□□□ 0.62
AP4E1-205ENST00000561393 DNAJC25Q9H1X3 360 aa18.91■□□□□ 0.62
AP4E1-205ENST00000561393 UBE3CQ15386 1083 aa18.91■□□□□ 0.62
AP4E1-205ENST00000561393 SALL3Q9BXA9 1300 aa18.91■□□□□ 0.62
AP4E1-205ENST00000561393 CLSTN1O94985 981 aa18.9■□□□□ 0.62
AP4E1-205ENST00000561393 PIH1D3Q9NQM4 214 aaKnown RBP18.9■□□□□ 0.62
AP4E1-205ENST00000561393 PEAK1Q9H792 1746 aa18.9■□□□□ 0.62
AP4E1-205ENST00000561393 KIF5BP33176 963 aa18.9■□□□□ 0.62
AP4E1-205ENST00000561393 ZNF445P59923 1031 aa18.9■□□□□ 0.62
AP4E1-205ENST00000561393 USP42Q9H9J4 1324 aaKnown RBP18.9■□□□□ 0.62
AP4E1-205ENST00000561393 ADD2P35612 726 aa18.9■□□□□ 0.62
AP4E1-205ENST00000561393 RASGRF1Q13972 1273 aa18.9■□□□□ 0.62
AP4E1-205ENST00000561393 AKNAD1Q5T1N1 836 aa18.9■□□□□ 0.62
AP4E1-205ENST00000561393 GPHNQ9NQX3 736 aaPredicted RBP18.9■□□□□ 0.62
AP4E1-205ENST00000561393 AKAP12Q02952 1782 aa18.9■□□□□ 0.62
AP4E1-205ENST00000561393 TYRO3Q06418 890 aa18.9■□□□□ 0.62
AP4E1-205ENST00000561393 QTRT2Q9H974 415 aaKnown RBP18.9■□□□□ 0.62
AP4E1-205ENST00000561393 PFKFB2O60825 505 aa18.89■□□□□ 0.61
AP4E1-205ENST00000561393 TSR1Q2NL82 804 aaKnown RBP18.89■□□□□ 0.61
AP4E1-205ENST00000561393 A0A1B0GVL5 298 aa18.89■□□□□ 0.61
AP4E1-205ENST00000561393 PDIA3P30101 505 aaKnown RBP18.89■□□□□ 0.61
AP4E1-205ENST00000561393 SYKP43405 635 aa18.89■□□□□ 0.61
AP4E1-205ENST00000561393 ZNF830Q96NB3 372 aaPredicted RBP18.89■□□□□ 0.61
AP4E1-205ENST00000561393 SEC63Q9UGP8 760 aaKnown RBP18.89■□□□□ 0.61
AP4E1-205ENST00000561393 CTDP1Q9Y5B0 961 aaPredicted RBP18.89■□□□□ 0.61
AP4E1-205ENST00000561393 KLHL10Q6JEL2 608 aa18.89■□□□□ 0.61
AP4E1-205ENST00000561393 TTC14Q96N46 770 aa18.89■□□□□ 0.61
AP4E1-205ENST00000561393 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.89■□□□□ 0.61
AP4E1-205ENST00000561393 CCDC194A0A1B0GVG4 234 aa18.88■□□□□ 0.61
AP4E1-205ENST00000561393 TTC6Q86TZ1 520 aa18.88■□□□□ 0.61
AP4E1-205ENST00000561393 FAM200AQ8TCP9 573 aa18.88■□□□□ 0.61
AP4E1-205ENST00000561393 ZNF274Q96GC6 653 aaPredicted RBP18.88■□□□□ 0.61
AP4E1-205ENST00000561393 USP17L12C9JPN9 530 aa18.88■□□□□ 0.61
AP4E1-205ENST00000561393 USP17L21D6R901 530 aa18.88■□□□□ 0.61
AP4E1-205ENST00000561393 PRKAB2O43741 272 aa18.88■□□□□ 0.61
AP4E1-205ENST00000561393 CDK5RAP3Q96JB5 506 aa18.88■□□□□ 0.61
AP4E1-205ENST00000561393 SAP30BPQ9UHR5 308 aaKnown RBP18.88■□□□□ 0.61
AP4E1-205ENST00000561393 ZDHHC9Q9Y397 364 aa18.88■□□□□ 0.61
AP4E1-205ENST00000561393 SPATA31A1Q5TZJ5 1347 aa18.87■□□□□ 0.61
AP4E1-205ENST00000561393 CYP2E1P05181 493 aaPredicted RBP18.87■□□□□ 0.61
AP4E1-205ENST00000561393 STX1AQ16623 288 aa18.87■□□□□ 0.61
AP4E1-205ENST00000561393 FMN2Q9NZ56 1722 aa18.87■□□□□ 0.61
AP4E1-205ENST00000561393 CCDC96Q2M329 555 aa18.87■□□□□ 0.61
AP4E1-205ENST00000561393 TRPC5Q9UL62 973 aaPredicted RBP18.87■□□□□ 0.61
AP4E1-205ENST00000561393 CDHR2Q9BYE9 1310 aa18.87■□□□□ 0.61
AP4E1-205ENST00000561393 hCG_1642624A0A1W2PR95 340 aa18.87■□□□□ 0.61
AP4E1-205ENST00000561393 TRIM37O94972 964 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms