RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 NIF3L1Q9GZT8 377 aa7.28□□□□□ -1.24
CASC4-211ENST00000561305 ZNF576Q9H609 170 aa7.28□□□□□ -1.24
CASC4-211ENST00000561305 NPHS2Q9NP85 383 aa7.28□□□□□ -1.24
CASC4-211ENST00000561305 SOWAHDA6NJG2 315 aa7.27□□□□□ -1.25
CASC4-211ENST00000561305 B3GALT4O96024 378 aa7.27□□□□□ -1.25
CASC4-211ENST00000561305 CYP11A1P05108 521 aa7.27□□□□□ -1.25
CASC4-211ENST00000561305 SOX4Q06945 474 aaPredicted RBP7.27□□□□□ -1.25
CASC4-211ENST00000561305 INTS5Q6P9B9 1019 aaKnown RBP7.27□□□□□ -1.25
CASC4-211ENST00000561305 CCDC74AQ96AQ1 378 aa7.27□□□□□ -1.25
CASC4-211ENST00000561305 DMRTB1Q96MA1 342 aa7.27□□□□□ -1.25
CASC4-211ENST00000561305 EHD4Q9H223 541 aa7.27□□□□□ -1.25
CASC4-211ENST00000561305 GNEQ9Y223 722 aaKnown RBP7.27□□□□□ -1.25
CASC4-211ENST00000561305 CTSBP07858 339 aa7.26□□□□□ -1.25
CASC4-211ENST00000561305 DRD2P14416 443 aa7.26□□□□□ -1.25
CASC4-211ENST00000561305 POU4F3Q15319 338 aa7.26□□□□□ -1.25
CASC4-211ENST00000561305 PRPF40BQ6NWY9 871 aaKnown RBP7.26□□□□□ -1.25
CASC4-211ENST00000561305 C2CD4AQ8NCU7 369 aaPredicted RBP7.26□□□□□ -1.25
CASC4-211ENST00000561305 TRIM56Q9BRZ2 755 aaKnown RBP7.26□□□□□ -1.25
CASC4-211ENST00000561305 ABCB6Q9NP58 842 aa7.26□□□□□ -1.25
CASC4-211ENST00000561305 TIMELESSQ9UNS1 1208 aa7.26□□□□□ -1.25
CASC4-211ENST00000561305 SPINK2P20155 84 aa7.25□□□□□ -1.25
CASC4-211ENST00000561305 MAOBP27338 520 aa7.25□□□□□ -1.25
CASC4-211ENST00000561305 GRIK1P39086 918 aa7.25□□□□□ -1.25
CASC4-211ENST00000561305 CDPF1Q6NVV7 123 aa7.25□□□□□ -1.25
CASC4-211ENST00000561305 TMC1Q8TDI8 760 aa7.25□□□□□ -1.25
CASC4-211ENST00000561305 EZH1Q92800 747 aaPredicted RBP7.25□□□□□ -1.25
CASC4-211ENST00000561305 CSRNP1Q96S65 589 aa7.25□□□□□ -1.25
CASC4-211ENST00000561305 ZFYVE1Q9HBF4 777 aa7.25□□□□□ -1.25
CASC4-211ENST00000561305 FAM95CA0A1B0GW59 222 aa7.24□□□□□ -1.25
CASC4-211ENST00000561305 WDR64B1ANS9 1081 aa7.24□□□□□ -1.25
CASC4-211ENST00000561305 BRD1O95696 1058 aa7.24□□□□□ -1.25
CASC4-211ENST00000561305 ADH5P11766 374 aa7.24□□□□□ -1.25
CASC4-211ENST00000561305 RXRBP28702 533 aa7.24□□□□□ -1.25
CASC4-211ENST00000561305 RPS26P11Q5JNZ5 115 aaPredicted RBP7.24□□□□□ -1.25
CASC4-211ENST00000561305 HP1BP3Q5SSJ5 553 aaPredicted RBP7.24□□□□□ -1.25
CASC4-211ENST00000561305 DDX54Q8TDD1 881 aaKnown RBP7.24□□□□□ -1.25
CASC4-211ENST00000561305 MFSD14AQ96MC6 490 aa7.24□□□□□ -1.25
CASC4-211ENST00000561305 TMEM238LA0A1B0GVL6 79 aa7.23□□□□□ -1.25
CASC4-211ENST00000561305 USP11P51784 963 aa7.23□□□□□ -1.25
CASC4-211ENST00000561305 DTX1Q86Y01 620 aa7.23□□□□□ -1.25
CASC4-211ENST00000561305 GLIS3Q8NEA6 775 aa7.23□□□□□ -1.25
CASC4-211ENST00000561305 FBLIM1Q8WUP2 373 aa7.23□□□□□ -1.25
CASC4-211ENST00000561305 TRAK1Q9UPV9 953 aa7.23□□□□□ -1.25
CASC4-211ENST00000561305 GADD45BO75293 160 aaPredicted RBP7.22□□□□□ -1.25
CASC4-211ENST00000561305 ECEL1O95672 775 aa7.22□□□□□ -1.25
CASC4-211ENST00000561305 F13BP05160 661 aa7.22□□□□□ -1.25
CASC4-211ENST00000561305 PAOXQ6QHF9 649 aa7.22□□□□□ -1.25
CASC4-211ENST00000561305 GSX1Q9H4S2 264 aaPredicted RBP7.22□□□□□ -1.25
CASC4-211ENST00000561305 DCTN4Q9UJW0 460 aa7.22□□□□□ -1.25
CASC4-211ENST00000561305 SYNGAP1Q96PV0 1343 aa7.22□□□□□ -1.25
CASC4-211ENST00000561305 AP3B2Q13367 1082 aa7.21□□□□□ -1.26
CASC4-211ENST00000561305 GRM2Q14416 872 aa7.21□□□□□ -1.26
CASC4-211ENST00000561305 NFKBIBQ15653 356 aa7.21□□□□□ -1.26
CASC4-211ENST00000561305 CPSF6Q16630 551 aaKnown RBP eCLIP7.21□□□□□ -1.261e-6■■■■□ 25
CASC4-211ENST00000561305 TMC7Q7Z402 723 aa7.21□□□□□ -1.26
CASC4-211ENST00000561305 GIMAP7Q8NHV1 300 aa7.21□□□□□ -1.26
CASC4-211ENST00000561305 EPS8L3Q8TE67 593 aaKnown RBP7.21□□□□□ -1.26
CASC4-211ENST00000561305 CORO1BQ9BR76 489 aa7.21□□□□□ -1.26
CASC4-211ENST00000561305 YIPF2Q9BWQ6 316 aa7.21□□□□□ -1.26
CASC4-211ENST00000561305 PIM2Q9P1W9 311 aa7.21□□□□□ -1.26
CASC4-211ENST00000561305 ACTL7BQ9Y614 415 aa7.21□□□□□ -1.26
CASC4-211ENST00000561305 ADAMTS4O75173 837 aa7.2□□□□□ -1.26
CASC4-211ENST00000561305 FAAP100Q0VG06 881 aa7.2□□□□□ -1.26
CASC4-211ENST00000561305 DSC3Q14574 896 aa7.2□□□□□ -1.26
CASC4-211ENST00000561305 SHISA5Q8N114 240 aa7.2□□□□□ -1.26
CASC4-211ENST00000561305 ATG3Q9NT62 314 aa7.2□□□□□ -1.26
CASC4-211ENST00000561305 PRKAG2Q9UGJ0 569 aa7.2□□□□□ -1.26
CASC4-211ENST00000561305 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.19□□□□□ -1.26
CASC4-211ENST00000561305 HOXA10P31260 410 aaPredicted RBP7.19□□□□□ -1.26
CASC4-211ENST00000561305 AKAP4Q5JQC9 854 aa7.19□□□□□ -1.26
CASC4-211ENST00000561305 FBXL6Q8N531 539 aa7.19□□□□□ -1.26
CASC4-211ENST00000561305 GATA6Q92908 595 aa7.19□□□□□ -1.26
CASC4-211ENST00000561305 WDR18Q9BV38 432 aa7.19□□□□□ -1.26
CASC4-211ENST00000561305 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
CASC4-211ENST00000561305 ACSS3Q9H6R3 686 aa7.19□□□□□ -1.26
CASC4-211ENST00000561305 RAD18Q9NS91 495 aa7.19□□□□□ -1.26
CASC4-211ENST00000561305 AOC2O75106 756 aa7.18□□□□□ -1.26
CASC4-211ENST00000561305 ADMP35318 185 aa7.18□□□□□ -1.26
CASC4-211ENST00000561305 GP2P55259 537 aaKnown RBP7.18□□□□□ -1.26
CASC4-211ENST00000561305 MAP7Q14244 749 aa7.18□□□□□ -1.26
CASC4-211ENST00000561305 DYMQ7RTS9 669 aa7.18□□□□□ -1.26
CASC4-211ENST00000561305 ZAR1Q86SH2 424 aa7.18□□□□□ -1.26
CASC4-211ENST00000561305 OSBPL1AQ9BXW6 950 aa7.18□□□□□ -1.26
CASC4-211ENST00000561305 FAM105AQ9NUU6 356 aa7.18□□□□□ -1.26
CASC4-211ENST00000561305 BIN2Q9UBW5 565 aaPredicted RBP7.18□□□□□ -1.26
CASC4-211ENST00000561305 LEMD3Q9Y2U8 911 aa7.18□□□□□ -1.26
CASC4-211ENST00000561305 OAS3Q9Y6K5 1087 aaKnown RBP7.18□□□□□ -1.26
CASC4-211ENST00000561305 COL17A1Q9UMD9 1497 aaPredicted RBP7.17□□□□□ -1.26
CASC4-211ENST00000561305 TREHO43280 583 aa7.17□□□□□ -1.26
CASC4-211ENST00000561305 NFICP08651 508 aa7.17□□□□□ -1.26
CASC4-211ENST00000561305 FOSL1P15407 271 aa7.17□□□□□ -1.26
CASC4-211ENST00000561305 MCTP1Q6DN14 999 aa7.17□□□□□ -1.26
CASC4-211ENST00000561305 PI16Q6UXB8 463 aa7.17□□□□□ -1.26
CASC4-211ENST00000561305 SEZ6L2Q6UXD5 910 aa7.17□□□□□ -1.26
CASC4-211ENST00000561305 TBC1D32Q96NH3 1257 aa7.17□□□□□ -1.26
CASC4-211ENST00000561305 METTL22Q9BUU2 404 aaPredicted RBP7.17□□□□□ -1.26
CASC4-211ENST00000561305 NLRP2Q9NX02 1062 aa7.17□□□□□ -1.26
CASC4-211ENST00000561305 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.16□□□□□ -1.26
CASC4-211ENST00000561305 WNT11O96014 354 aa7.16□□□□□ -1.26
CASC4-211ENST00000561305 XRCC5P13010 732 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms