RNA–Protein interactions for RNA: ENST00000561204.5

MEIS3-211, Transcript of Meis homeobox 3, humanhuman

TSL 1 (best)

Gene MEIS3, Length 2,195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-211ENST00000561204 TTF1Q15361 905 aaPredicted RBP20.29■□□□□ 0.84
MEIS3-211ENST00000561204 TBC1D10CQ8IV04 446 aa20.29■□□□□ 0.84
MEIS3-211ENST00000561204 DISP2A7MBM2 1401 aa20.29■□□□□ 0.84
MEIS3-211ENST00000561204 A0A1W2PQ27 194 aa20.29■□□□□ 0.84
MEIS3-211ENST00000561204 A0A1W2PQ64 194 aa20.29■□□□□ 0.84
MEIS3-211ENST00000561204 A0A1W2PQD8 194 aa20.29■□□□□ 0.84
MEIS3-211ENST00000561204 CPLX1O14810 134 aa20.29■□□□□ 0.84
MEIS3-211ENST00000561204 PRKCSHP14314 528 aaPredicted RBP20.29■□□□□ 0.84
MEIS3-211ENST00000561204 PHKA1P46020 1223 aa20.29■□□□□ 0.84
MEIS3-211ENST00000561204 POLR3EQ9NVU0 708 aa20.29■□□□□ 0.84
MEIS3-211ENST00000561204 CLIP2Q9UDT6 1046 aa20.29■□□□□ 0.84
MEIS3-211ENST00000561204 GOLGA6L19H0YKK7 550 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 IDH1O75874 414 aaKnown RBP20.28■□□□□ 0.84
MEIS3-211ENST00000561204 CDC25BP30305 580 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 UBE3CQ15386 1083 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 CCDC102BQ68D86 513 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 DHX40Q8IX18 779 aaKnown RBP20.28■□□□□ 0.84
MEIS3-211ENST00000561204 ERCC4Q92889 916 aaPredicted RBP20.28■□□□□ 0.84
MEIS3-211ENST00000561204 MAP7D2Q96T17 732 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 UBN2Q6ZU65 1347 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 A0A1B0GVL5 298 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 KIF28PB7ZC32 967 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 PDE8AO60658 829 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 ARID4AP29374 1257 aaPredicted RBP20.28■□□□□ 0.84
MEIS3-211ENST00000561204 CCDC144BQ3MJ40 725 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 MYSM1Q5VVJ2 828 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 CYB5R4Q7L1T6 521 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 CCDC144CPQ8IYA2 1237 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 ANO10Q9NW15 660 aa20.28■□□□□ 0.84
MEIS3-211ENST00000561204 ZNF532Q9HCE3 1301 aa20.27■□□□□ 0.84
MEIS3-211ENST00000561204 YEATS4O95619 227 aa20.27■□□□□ 0.84
MEIS3-211ENST00000561204 NDUFA8P51970 172 aa20.27■□□□□ 0.84
MEIS3-211ENST00000561204 STK38Q15208 465 aa20.27■□□□□ 0.84
MEIS3-211ENST00000561204 BRAPQ7Z569 592 aa20.27■□□□□ 0.84
MEIS3-211ENST00000561204 TCRBV5S4A2TA0A5A2 114 aa20.27■□□□□ 0.83
MEIS3-211ENST00000561204 PDE6AP16499 860 aa20.27■□□□□ 0.83
MEIS3-211ENST00000561204 TRDNQ13061 729 aa20.27■□□□□ 0.83
MEIS3-211ENST00000561204 KCNG4Q8TDN1 519 aa20.27■□□□□ 0.83
MEIS3-211ENST00000561204 CACTINQ8WUQ7 758 aaKnown RBP20.27■□□□□ 0.83
MEIS3-211ENST00000561204 TSC1Q92574 1164 aa20.27■□□□□ 0.83
MEIS3-211ENST00000561204 WWC3Q9ULE0 1092 aa20.27■□□□□ 0.83
MEIS3-211ENST00000561204 ANGEL1Q9UNK9 670 aaKnown RBP20.27■□□□□ 0.83
MEIS3-211ENST00000561204 TBC1D2BQ9UPU7 963 aa20.27■□□□□ 0.83
MEIS3-211ENST00000561204 KIF23Q02241 960 aaPredicted RBP20.26■□□□□ 0.83
MEIS3-211ENST00000561204 MRFAP1L1Q96HT8 127 aa20.26■□□□□ 0.83
MEIS3-211ENST00000561204 KAT6BQ8WYB5 2073 aa20.26■□□□□ 0.83
MEIS3-211ENST00000561204 ZMYM6O95789 1325 aa20.26■□□□□ 0.83
MEIS3-211ENST00000561204 LRP5O75197 1615 aa20.26■□□□□ 0.83
MEIS3-211ENST00000561204 ERVV-1B6SEH8 477 aa20.25■□□□□ 0.83
MEIS3-211ENST00000561204 APPP05067 770 aa20.25■□□□□ 0.83
MEIS3-211ENST00000561204 SF3A1Q15459 793 aaKnown RBP20.25■□□□□ 0.83
MEIS3-211ENST00000561204 DZIP3Q86Y13 1208 aaKnown RBP20.25■□□□□ 0.83
MEIS3-211ENST00000561204 SLIT2O94813 1529 aa20.25■□□□□ 0.83
MEIS3-211ENST00000561204 NEDD4P46934 1319 aa20.25■□□□□ 0.83
MEIS3-211ENST00000561204 SH2B2O14492 632 aaPredicted RBP20.25■□□□□ 0.83
MEIS3-211ENST00000561204 SPTLC2O15270 562 aa20.25■□□□□ 0.83
MEIS3-211ENST00000561204 FGFR2P21802 821 aa20.25■□□□□ 0.83
MEIS3-211ENST00000561204 ZNF34Q8IZ26 560 aa20.25■□□□□ 0.83
MEIS3-211ENST00000561204 HELBQ8NG08 1087 aaPredicted RBP20.25■□□□□ 0.83
MEIS3-211ENST00000561204 SDF4Q9BRK5 362 aa20.25■□□□□ 0.83
MEIS3-211ENST00000561204 SENP2Q9HC62 589 aa20.25■□□□□ 0.83
MEIS3-211ENST00000561204 BECN2A8MW95 431 aa20.24■□□□□ 0.83
MEIS3-211ENST00000561204 UQCRFS1P1P0C7P4 283 aa20.24■□□□□ 0.83
MEIS3-211ENST00000561204 PUM3Q15397 648 aaKnown RBP20.24■□□□□ 0.83
MEIS3-211ENST00000561204 GLIPR1L2Q4G1C9 344 aa20.24■□□□□ 0.83
MEIS3-211ENST00000561204 SYTL4Q96C24 671 aaPredicted RBP20.24■□□□□ 0.83
MEIS3-211ENST00000561204 AIFM3Q96NN9 605 aa20.24■□□□□ 0.83
MEIS3-211ENST00000561204 STRBPQ96SI9 672 aaKnown RBP20.24■□□□□ 0.83
MEIS3-211ENST00000561204 B4E1Z4 1266 aa20.24■□□□□ 0.83
MEIS3-211ENST00000561204 IL6STP40189 918 aaPredicted RBP20.24■□□□□ 0.83
MEIS3-211ENST00000561204 CEP57L1Q8IYX8 460 aa20.24■□□□□ 0.83
MEIS3-211ENST00000561204 LPIN2Q92539 896 aa20.24■□□□□ 0.83
MEIS3-211ENST00000561204 ARAP2Q8WZ64 1704 aa20.23■□□□□ 0.83
MEIS3-211ENST00000561204 RXRAP19793 462 aa20.23■□□□□ 0.83
MEIS3-211ENST00000561204 METAP2P50579 478 aaKnown RBP eCLIP20.23■□□□□ 0.83
MEIS3-211ENST00000561204 ANO1Q5XXA6 986 aa20.23■□□□□ 0.83
MEIS3-211ENST00000561204 APOA5Q6Q788 366 aa20.23■□□□□ 0.83
MEIS3-211ENST00000561204 MTERF4Q7Z6M4 381 aaKnown RBP20.23■□□□□ 0.83
MEIS3-211ENST00000561204 AXDND1Q5T1B0 1012 aaPredicted RBP20.22■□□□□ 0.83
MEIS3-211ENST00000561204 SYNE3Q6ZMZ3 975 aa20.22■□□□□ 0.83
MEIS3-211ENST00000561204 ZNF710Q8N1W2 664 aa20.22■□□□□ 0.83
MEIS3-211ENST00000561204 AOPEPQ8N6M6 819 aa20.22■□□□□ 0.83
MEIS3-211ENST00000561204 RGS22Q8NE09 1264 aa20.22■□□□□ 0.83
MEIS3-211ENST00000561204 FBXW7Q969H0 707 aa20.22■□□□□ 0.83
MEIS3-211ENST00000561204 CDC27P30260 824 aa20.22■□□□□ 0.83
MEIS3-211ENST00000561204 KIAA1468Q9P260 1216 aa20.22■□□□□ 0.83
MEIS3-211ENST00000561204 MROH5Q6ZUA9 1318 aa20.22■□□□□ 0.83
MEIS3-211ENST00000561204 RIOK3O14730 519 aaKnown RBP20.21■□□□□ 0.83
MEIS3-211ENST00000561204 CHAF1AQ13111 956 aaPredicted RBP20.21■□□□□ 0.83
MEIS3-211ENST00000561204 SPATA5Q8NB90 893 aa20.21■□□□□ 0.83
MEIS3-211ENST00000561204 IGDCC4Q8TDY8 1250 aa20.21■□□□□ 0.83
MEIS3-211ENST00000561204 AIDAQ96BJ3 306 aa20.21■□□□□ 0.83
MEIS3-211ENST00000561204 ALG1Q9BT22 464 aa20.21■□□□□ 0.83
MEIS3-211ENST00000561204 INCENPQ9NQS7 918 aa20.21■□□□□ 0.83
MEIS3-211ENST00000561204 FAM177BA6PVY3 158 aa20.21■□□□□ 0.83
MEIS3-211ENST00000561204 ARID5BQ14865 1188 aa20.21■□□□□ 0.83
MEIS3-211ENST00000561204 ALX1Q15699 326 aa20.21■□□□□ 0.83
MEIS3-211ENST00000561204 LRRC8AQ8IWT6 810 aa20.21■□□□□ 0.83
MEIS3-211ENST00000561204 NAT10Q9H0A0 1025 aaKnown RBP20.21■□□□□ 0.83
MEIS3-211ENST00000561204 EPB41L4AQ9HCS5 686 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms